RNA–Protein interactions for RNA: ENST00000551111.1

PRPF40B-212, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-212ENST00000551111 H2AFY2Q9P0M6 372 aaPredicted RBP9.25□□□□□ -0.93
PRPF40B-212ENST00000551111 METTL15A6NJ78 407 aa9.24□□□□□ -0.93
PRPF40B-212ENST00000551111 HAND1O96004 215 aa9.24□□□□□ -0.93
PRPF40B-212ENST00000551111 RBP4P02753 201 aa9.24□□□□□ -0.93
PRPF40B-212ENST00000551111 AMY1AP04745 511 aa9.24□□□□□ -0.93
PRPF40B-212ENST00000551111 AMY2AP04746 511 aa9.24□□□□□ -0.93
PRPF40B-212ENST00000551111 GABRR1P24046 479 aa9.24□□□□□ -0.93
PRPF40B-212ENST00000551111 OR3A1P47881 315 aa9.24□□□□□ -0.93
PRPF40B-212ENST00000551111 DYNLT3P51808 116 aa9.24□□□□□ -0.93
PRPF40B-212ENST00000551111 FUT6P51993 359 aa9.24□□□□□ -0.93
PRPF40B-212ENST00000551111 LOXL3P58215 753 aa9.24□□□□□ -0.93
PRPF40B-212ENST00000551111 ZNF85Q03923 595 aa9.24□□□□□ -0.93
PRPF40B-212ENST00000551111 ZNF91Q05481 1191 aa9.24□□□□□ -0.93
PRPF40B-212ENST00000551111 GRK1Q15835 563 aa9.24□□□□□ -0.93
PRPF40B-212ENST00000551111 TP53I3Q53FA7 332 aa9.24□□□□□ -0.93
PRPF40B-212ENST00000551111 PRAMEF5Q5TYX0 476 aa9.24□□□□□ -0.93
PRPF40B-212ENST00000551111 OR5AU1Q8NGC0 362 aa9.24□□□□□ -0.93
PRPF40B-212ENST00000551111 OR10AC1Q8NH08 325 aa9.24□□□□□ -0.93
PRPF40B-212ENST00000551111 NDNFQ8TB73 568 aa9.24□□□□□ -0.93
PRPF40B-212ENST00000551111 DNAJC9Q8WXX5 260 aa9.24□□□□□ -0.93
PRPF40B-212ENST00000551111 EMG1Q92979 244 aaKnown RBP9.24□□□□□ -0.93
PRPF40B-212ENST00000551111 RFT1Q96AA3 541 aa9.24□□□□□ -0.93
PRPF40B-212ENST00000551111 FOXRED1Q96CU9 486 aaPredicted RBP9.24□□□□□ -0.93
PRPF40B-212ENST00000551111 SPACA5Q96QH8 159 aa9.24□□□□□ -0.93
PRPF40B-212ENST00000551111 CHST5Q9GZS9 411 aa9.24□□□□□ -0.93
PRPF40B-212ENST00000551111 TMEM133Q9H2Q1 129 aa9.24□□□□□ -0.93
PRPF40B-212ENST00000551111 NECAP2Q9NVZ3 263 aa9.24□□□□□ -0.93
PRPF40B-212ENST00000551111 SLC7A11Q9UPY5 501 aa9.24□□□□□ -0.93
PRPF40B-212ENST00000551111 SESN1Q9Y6P5 492 aa9.24□□□□□ -0.93
PRPF40B-212ENST00000551111 IGKV1-12A0A0C4DH73 117 aa9.23□□□□□ -0.93
PRPF40B-212ENST00000551111 LOC107986453A0A1B0GWG9 222 aa9.23□□□□□ -0.93
PRPF40B-212ENST00000551111 F2RL2O00254 374 aa9.23□□□□□ -0.93
PRPF40B-212ENST00000551111 XPNPEP2O43895 674 aa9.23□□□□□ -0.93
PRPF40B-212ENST00000551111 ENTPD6O75354 484 aa9.23□□□□□ -0.93
PRPF40B-212ENST00000551111 DNAJC8O75937 253 aaPredicted RBP9.23□□□□□ -0.93
PRPF40B-212ENST00000551111 ALX3O95076 343 aa9.23□□□□□ -0.93
PRPF40B-212ENST00000551111 IGKV1D-12P01611 117 aa9.23□□□□□ -0.93
PRPF40B-212ENST00000551111 KRT8P05787 483 aa9.23□□□□□ -0.93
PRPF40B-212ENST00000551111 VDAC2P45880 294 aaPredicted RBP9.23□□□□□ -0.93
PRPF40B-212ENST00000551111 POU3F4P49335 361 aa9.23□□□□□ -0.93
PRPF40B-212ENST00000551111 OR12D2P58182 307 aa9.23□□□□□ -0.93
PRPF40B-212ENST00000551111 ACTR3P61158 418 aa9.23□□□□□ -0.93
PRPF40B-212ENST00000551111 ISL1P61371 349 aa9.23□□□□□ -0.93
PRPF40B-212ENST00000551111 MEF2CQ06413 473 aaPredicted RBP9.23□□□□□ -0.93
PRPF40B-212ENST00000551111 CCDC121Q6ZUS5 278 aa9.23□□□□□ -0.93
PRPF40B-212ENST00000551111 OR10H4Q8NGA5 316 aa9.23□□□□□ -0.93
PRPF40B-212ENST00000551111 EME1Q96AY2 570 aa9.23□□□□□ -0.93
PRPF40B-212ENST00000551111 MNTQ99583 582 aa9.23□□□□□ -0.93
PRPF40B-212ENST00000551111 CIB1Q99828 191 aa9.23□□□□□ -0.93
PRPF40B-212ENST00000551111 CLEC7AQ9BXN2 247 aa9.23□□□□□ -0.93
PRPF40B-212ENST00000551111 PLEKHA1Q9HB21 404 aa9.23□□□□□ -0.93
PRPF40B-212ENST00000551111 LINC00312Q9Y6C7 94 aa9.23□□□□□ -0.93
PRPF40B-212ENST00000551111 hADV38S2A0JD32 116 aa9.22□□□□□ -0.93
PRPF40B-212ENST00000551111 G3V2T6 193 aa9.22□□□□□ -0.93
PRPF40B-212ENST00000551111 K7EIL1 84 aa9.22□□□□□ -0.93
PRPF40B-212ENST00000551111 SIRPB1O00241 398 aa9.22□□□□□ -0.93
PRPF40B-212ENST00000551111 MPIG6BO95866 241 aa9.22□□□□□ -0.93
PRPF40B-212ENST00000551111 LPLP06858 475 aa9.22□□□□□ -0.93
PRPF40B-212ENST00000551111 OR2T7P0C7T2 308 aa9.22□□□□□ -0.93
PRPF40B-212ENST00000551111 PRKACAP17612 351 aa9.22□□□□□ -0.93
PRPF40B-212ENST00000551111 GLIPR1P48060 266 aa9.22□□□□□ -0.93
PRPF40B-212ENST00000551111 NANOS3P60323 173 aaKnown RBP9.22□□□□□ -0.93
PRPF40B-212ENST00000551111 KRTAP10-11P60412 298 aa9.22□□□□□ -0.93
PRPF40B-212ENST00000551111 ATP6AP1Q15904 470 aa9.22□□□□□ -0.93
PRPF40B-212ENST00000551111 DNAL1Q4LDG9 190 aa9.22□□□□□ -0.93
PRPF40B-212ENST00000551111 ABCA11PQ4W5N1 156 aa9.22□□□□□ -0.93
PRPF40B-212ENST00000551111 ARSJQ5FYB0 599 aaPredicted RBP9.22□□□□□ -0.93
PRPF40B-212ENST00000551111 MINOS1Q5TGZ0 78 aa9.22□□□□□ -0.93
PRPF40B-212ENST00000551111 REC114Q7Z4M0 266 aa9.22□□□□□ -0.93
PRPF40B-212ENST00000551111 GID4Q8IVV7 300 aa9.22□□□□□ -0.93
PRPF40B-212ENST00000551111 FAM58AQ8N1B3 248 aa9.22□□□□□ -0.93
PRPF40B-212ENST00000551111 WFDC9Q8NEX5 89 aa9.22□□□□□ -0.93
PRPF40B-212ENST00000551111 OR4F17Q8NGA8 305 aa9.22□□□□□ -0.93
PRPF40B-212ENST00000551111 BCAS4Q8TDM0 211 aa9.22□□□□□ -0.93
PRPF40B-212ENST00000551111 FGGYQ96C11 551 aa9.22□□□□□ -0.93
PRPF40B-212ENST00000551111 BORCS8Q96FH0 119 aa9.22□□□□□ -0.93
PRPF40B-212ENST00000551111 OR4F4Q96R69 305 aa9.22□□□□□ -0.93
PRPF40B-212ENST00000551111 ZNF286AQ9HBT8 521 aa9.22□□□□□ -0.93
PRPF40B-212ENST00000551111 ING3Q9NXR8 418 aa9.22□□□□□ -0.93
PRPF40B-212ENST00000551111 FRRS1LQ9P0K9 344 aa9.22□□□□□ -0.93
PRPF40B-212ENST00000551111 AASSQ9UDR5 926 aa9.22□□□□□ -0.93
PRPF40B-212ENST00000551111 WARS2Q9UGM6 360 aaKnown RBP9.22□□□□□ -0.93
PRPF40B-212ENST00000551111 PITPNC1Q9UKF7 332 aa9.22□□□□□ -0.93
PRPF40B-212ENST00000551111 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9.22□□□□□ -0.93
PRPF40B-212ENST00000551111 ZNF281Q9Y2X9 895 aa9.22□□□□□ -0.93
PRPF40B-212ENST00000551111 MINOS1-NBL1R4GNA1 71 aa9.22□□□□□ -0.93
PRPF40B-212ENST00000551111 TRBV2A0A0J9YWF9 115 aa9.21□□□□□ -0.94
PRPF40B-212ENST00000551111 WI2-2373I1.2A0A1W2PRP0 233 aa9.21□□□□□ -0.94
PRPF40B-212ENST00000551111 PEX14O75381 377 aa9.21□□□□□ -0.94
PRPF40B-212ENST00000551111 OR2H2O95918 312 aa9.21□□□□□ -0.94
PRPF40B-212ENST00000551111 IGLV1-47P01700 117 aa9.21□□□□□ -0.94
PRPF40B-212ENST00000551111 HOXB6P17509 224 aaKnown RBP9.21□□□□□ -0.94
PRPF40B-212ENST00000551111 CD33P20138 364 aa9.21□□□□□ -0.94
PRPF40B-212ENST00000551111 CDK2P24941 298 aa9.21□□□□□ -0.94
PRPF40B-212ENST00000551111 PEX2P28328 305 aa9.21□□□□□ -0.94
PRPF40B-212ENST00000551111 HTR1FP30939 366 aa9.21□□□□□ -0.94
PRPF40B-212ENST00000551111 RBP2P50120 134 aa9.21□□□□□ -0.94
PRPF40B-212ENST00000551111 AESQ08117 197 aa9.21□□□□□ -0.94
PRPF40B-212ENST00000551111 ZNF146Q15072 292 aa9.21□□□□□ -0.94
PRPF40B-212ENST00000551111 C11orf87Q6NUJ2 197 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 120.5 ms