RNA–Protein interactions for RNA: ENST00000539952.5

CPSF7-219, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 953 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-219ENST00000539952 DUX5Q96PT3 197 aa5.04□□□□□ -1.6
CPSF7-219ENST00000539952 DDOQ99489 341 aa5.04□□□□□ -1.6
CPSF7-219ENST00000539952 SEC22CQ9BRL7 303 aa5.04□□□□□ -1.6
CPSF7-219ENST00000539952 ZNF426Q9BUY5 554 aa5.04□□□□□ -1.6
CPSF7-219ENST00000539952 C1QTNF5Q9BXJ0 243 aa5.04□□□□□ -1.6
CPSF7-219ENST00000539952 COMMD4Q9H0A8 199 aa5.04□□□□□ -1.6
CPSF7-219ENST00000539952 ARL6Q9H0F7 186 aa5.04□□□□□ -1.6
CPSF7-219ENST00000539952 SCPEP1Q9HB40 452 aa5.04□□□□□ -1.6
CPSF7-219ENST00000539952 NOX4Q9NPH5 578 aa5.04□□□□□ -1.6
CPSF7-219ENST00000539952 COMMD9Q9P000 198 aa5.04□□□□□ -1.6
CPSF7-219ENST00000539952 PIPOXQ9P0Z9 390 aa5.04□□□□□ -1.6
CPSF7-219ENST00000539952 TAAR3PQ9P1P4 343 aa5.04□□□□□ -1.6
CPSF7-219ENST00000539952 MBD2Q9UBB5 411 aa5.04□□□□□ -1.6
CPSF7-219ENST00000539952 GNG8Q9UK08 70 aa5.04□□□□□ -1.6
CPSF7-219ENST00000539952 KCNK7Q9Y2U2 307 aa5.04□□□□□ -1.6
CPSF7-219ENST00000539952 POLR3KQ9Y2Y1 108 aaPredicted RBP5.04□□□□□ -1.6
CPSF7-219ENST00000539952 WIPI2Q9Y4P8 454 aa5.04□□□□□ -1.6
CPSF7-219ENST00000539952 WNK1Q9H4A3 2382 aa5.04□□□□□ -1.6
CPSF7-219ENST00000539952 IGLV3-9A0A075B6K5 115 aa5.03□□□□□ -1.6
CPSF7-219ENST00000539952 KANTRA0A1W2PQU2 76 aa5.03□□□□□ -1.6
CPSF7-219ENST00000539952 TMEM212A6NML5 194 aa5.03□□□□□ -1.6
CPSF7-219ENST00000539952 ANXA2P2A6NMY6 339 aa5.03□□□□□ -1.6
CPSF7-219ENST00000539952 H7C2Y5 167 aa5.03□□□□□ -1.6
CPSF7-219ENST00000539952 FRS3O43559 492 aa5.03□□□□□ -1.6
CPSF7-219ENST00000539952 TRAF3IP2O43734 574 aaPredicted RBP5.03□□□□□ -1.6
CPSF7-219ENST00000539952 GMDSO60547 372 aa5.03□□□□□ -1.6
CPSF7-219ENST00000539952 NPIPB7O75200 414 aa5.03□□□□□ -1.6
CPSF7-219ENST00000539952 SCGNO76038 276 aa5.03□□□□□ -1.6
CPSF7-219ENST00000539952 AHSA1O95433 338 aa5.03□□□□□ -1.6
CPSF7-219ENST00000539952 PPP1R3DO95685 299 aa5.03□□□□□ -1.6
CPSF7-219ENST00000539952 CFDP00746 253 aaPredicted RBP5.03□□□□□ -1.6
CPSF7-219ENST00000539952 HLA-HP01893 362 aa5.03□□□□□ -1.6
CPSF7-219ENST00000539952 SERPINA5P05154 406 aa5.03□□□□□ -1.6
CPSF7-219ENST00000539952 ANXA2P07355 339 aaKnown RBP5.03□□□□□ -1.6
CPSF7-219ENST00000539952 NMBP08949 121 aa5.03□□□□□ -1.6
CPSF7-219ENST00000539952 ZNF14P17017 642 aaPredicted RBP5.03□□□□□ -1.6
CPSF7-219ENST00000539952 HLA-GP17693 338 aa5.03□□□□□ -1.6
CPSF7-219ENST00000539952 CXCL2P19875 107 aa5.03□□□□□ -1.6
CPSF7-219ENST00000539952 PRSS3P35030 304 aa5.03□□□□□ -1.6
CPSF7-219ENST00000539952 KLF3P57682 345 aaPredicted RBP5.03□□□□□ -1.6
CPSF7-219ENST00000539952 TAS2R19P59542 299 aa5.03□□□□□ -1.6
CPSF7-219ENST00000539952 TAS2R20P59543 309 aa5.03□□□□□ -1.6
CPSF7-219ENST00000539952 RPS11P62280 158 aaKnown RBP eCLIP5.03□□□□□ -1.6
CPSF7-219ENST00000539952 LCN2P80188 198 aa5.03□□□□□ -1.6
CPSF7-219ENST00000539952 EGR3Q06889 387 aa5.03□□□□□ -1.6
CPSF7-219ENST00000539952 ZNF154Q13106 437 aa5.03□□□□□ -1.6
CPSF7-219ENST00000539952 ALKBH1Q13686 389 aaKnown RBP5.03□□□□□ -1.6
CPSF7-219ENST00000539952 TP53I3Q53FA7 332 aa5.03□□□□□ -1.6
CPSF7-219ENST00000539952 MRPL2Q5T653 305 aaKnown RBP5.03□□□□□ -1.6
CPSF7-219ENST00000539952 C1orf140Q5VVS0 124 aa5.03□□□□□ -1.6
CPSF7-219ENST00000539952 Q6ZTK2 550 aa5.03□□□□□ -1.6
CPSF7-219ENST00000539952 OLIG3Q7RTU3 272 aa5.03□□□□□ -1.6
CPSF7-219ENST00000539952 WDFY1Q8IWB7 410 aa5.03□□□□□ -1.6
CPSF7-219ENST00000539952 KDM8Q8N371 416 aa5.03□□□□□ -1.6
CPSF7-219ENST00000539952 C12orf45Q8N5I9 185 aaPredicted RBP5.03□□□□□ -1.6
CPSF7-219ENST00000539952 TMEM229BQ8NBD8 167 aa5.03□□□□□ -1.6
CPSF7-219ENST00000539952 BEST4Q8NFU0 473 aa5.03□□□□□ -1.6
CPSF7-219ENST00000539952 OR52E2Q8NGJ4 325 aa5.03□□□□□ -1.6
CPSF7-219ENST00000539952 OR1J2Q8NGS2 313 aa5.03□□□□□ -1.6
CPSF7-219ENST00000539952 OR5J2Q8NH18 312 aa5.03□□□□□ -1.6
CPSF7-219ENST00000539952 OR51A7Q8NH64 312 aa5.03□□□□□ -1.6
CPSF7-219ENST00000539952 COQ8AQ8NI60 647 aa5.03□□□□□ -1.6
CPSF7-219ENST00000539952 ZNF519Q8TB69 540 aa5.03□□□□□ -1.6
CPSF7-219ENST00000539952 LIPHQ8WWY8 451 aa5.03□□□□□ -1.6
CPSF7-219ENST00000539952 PTX4Q96A99 478 aa5.03□□□□□ -1.6
CPSF7-219ENST00000539952 SLC25A36Q96CQ1 311 aa5.03□□□□□ -1.6
CPSF7-219ENST00000539952 DERL3Q96Q80 235 aa5.03□□□□□ -1.6
CPSF7-219ENST00000539952 GPX7Q96SL4 187 aaPredicted RBP5.03□□□□□ -1.6
CPSF7-219ENST00000539952 CITED1Q99966 193 aa5.03□□□□□ -1.6
CPSF7-219ENST00000539952 GAL3ST1Q99999 423 aa5.03□□□□□ -1.6
CPSF7-219ENST00000539952 NMNAT2Q9BZQ4 307 aa5.03□□□□□ -1.6
CPSF7-219ENST00000539952 BCL2L14Q9BZR8 327 aa5.03□□□□□ -1.6
CPSF7-219ENST00000539952 MFFQ9GZY8 342 aa5.03□□□□□ -1.6
CPSF7-219ENST00000539952 C1orf198Q9H425 327 aa5.03□□□□□ -1.6
CPSF7-219ENST00000539952 MED20Q9H944 212 aa5.03□□□□□ -1.6
CPSF7-219ENST00000539952 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP5.03□□□□□ -1.6
CPSF7-219ENST00000539952 MYEF2Q9P2K5 600 aaKnown RBP5.03□□□□□ -1.6
CPSF7-219ENST00000539952 STEAP1Q9UHE8 339 aa5.03□□□□□ -1.6
CPSF7-219ENST00000539952 ATPIF1Q9UII2 106 aa5.03□□□□□ -1.6
CPSF7-219ENST00000539952 TRBV5-5A0A0J9YX44 114 aa5.02□□□□□ -1.61
CPSF7-219ENST00000539952 A0A1B0GWA3 101 aa5.02□□□□□ -1.61
CPSF7-219ENST00000539952 CLPSL1A2RUU4 121 aa5.02□□□□□ -1.61
CPSF7-219ENST00000539952 ZNF503-AS2A6NEH8 195 aa5.02□□□□□ -1.61
CPSF7-219ENST00000539952 A6NIN4 97 aa5.02□□□□□ -1.61
CPSF7-219ENST00000539952 ZNF726A6NNF4 738 aa5.02□□□□□ -1.61
CPSF7-219ENST00000539952 DISC1C4P0D8 188 aa5.02□□□□□ -1.61
CPSF7-219ENST00000539952 FTCDNL1E5RQL4 147 aa5.02□□□□□ -1.61
CPSF7-219ENST00000539952 G3V3Q6 166 aa5.02□□□□□ -1.61
CPSF7-219ENST00000539952 H3BUI4 141 aa5.02□□□□□ -1.61
CPSF7-219ENST00000539952 TXNDC12O95881 172 aa5.02□□□□□ -1.61
CPSF7-219ENST00000539952 RENP00797 406 aa5.02□□□□□ -1.61
CPSF7-219ENST00000539952 NGFP01138 241 aa5.02□□□□□ -1.61
CPSF7-219ENST00000539952 MRPL3P09001 348 aaKnown RBP5.02□□□□□ -1.61
CPSF7-219ENST00000539952 H2AFB1P0C5Y9 115 aa5.02□□□□□ -1.61
CPSF7-219ENST00000539952 PPIAL4GP0DN37 164 aa5.02□□□□□ -1.61
CPSF7-219ENST00000539952 PNMTP11086 282 aa5.02□□□□□ -1.61
CPSF7-219ENST00000539952 PRKACAP17612 351 aa5.02□□□□□ -1.61
CPSF7-219ENST00000539952 FUT1P19526 365 aa5.02□□□□□ -1.61
CPSF7-219ENST00000539952 CPT2P23786 658 aa5.02□□□□□ -1.61
CPSF7-219ENST00000539952 CDK2P24941 298 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms