RNA–Protein interactions for RNA: ENST00000525121.2

HMGB1P40-201, Transcript of high mobility group box 1 pseudogene 40, humanhuman

BASIC

Gene HMGB1P40, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P40-201ENST00000525121 hADV38S2A0JD32 116 aa4.47□□□□□ -1.69
HMGB1P40-201ENST00000525121 H3BUI4 141 aa4.47□□□□□ -1.69
HMGB1P40-201ENST00000525121 M0R1W7 72 aa4.47□□□□□ -1.69
HMGB1P40-201ENST00000525121 SIRPB1O00241 398 aa4.47□□□□□ -1.69
HMGB1P40-201ENST00000525121 GABRPO00591 440 aa4.47□□□□□ -1.69
HMGB1P40-201ENST00000525121 TNFRSF13BO14836 293 aaPredicted RBP4.47□□□□□ -1.69
HMGB1P40-201ENST00000525121 DEGS1O15121 323 aa4.47□□□□□ -1.69
HMGB1P40-201ENST00000525121 GPX5O75715 221 aa4.47□□□□□ -1.69
HMGB1P40-201ENST00000525121 HTR3BO95264 441 aa4.47□□□□□ -1.69
HMGB1P40-201ENST00000525121 TK1P04183 234 aa4.47□□□□□ -1.69
HMGB1P40-201ENST00000525121 MAS1P04201 325 aa4.47□□□□□ -1.69
HMGB1P40-201ENST00000525121 DUX4L2P0CJ85 424 aa4.47□□□□□ -1.69
HMGB1P40-201ENST00000525121 DUX4L3P0CJ86 424 aa4.47□□□□□ -1.69
HMGB1P40-201ENST00000525121 DUX4L4P0CJ87 422 aa4.47□□□□□ -1.69
HMGB1P40-201ENST00000525121 DUX4L5P0CJ88 424 aa4.47□□□□□ -1.69
HMGB1P40-201ENST00000525121 DUX4L6P0CJ89 424 aa4.47□□□□□ -1.69
HMGB1P40-201ENST00000525121 DUX4L7P0CJ90 424 aa4.47□□□□□ -1.69
HMGB1P40-201ENST00000525121 GTF2F2P13984 249 aa4.47□□□□□ -1.69
HMGB1P40-201ENST00000525121 SELLP14151 372 aa4.47□□□□□ -1.69
HMGB1P40-201ENST00000525121 CPEP16870 476 aa4.47□□□□□ -1.69
HMGB1P40-201ENST00000525121 SERPINA2P20848 420 aa4.47□□□□□ -1.69
HMGB1P40-201ENST00000525121 MYL9P24844 172 aa4.47□□□□□ -1.69
HMGB1P40-201ENST00000525121 PSMB9P28065 219 aa4.47□□□□□ -1.69
HMGB1P40-201ENST00000525121 GABRA5P31644 462 aa4.47□□□□□ -1.69
HMGB1P40-201ENST00000525121 PTGFRP43088 359 aa4.47□□□□□ -1.69
HMGB1P40-201ENST00000525121 MAP2K4P45985 399 aa4.47□□□□□ -1.69
HMGB1P40-201ENST00000525121 OR3A4PP47883 348 aa4.47□□□□□ -1.69
HMGB1P40-201ENST00000525121 NPBWR2P48146 333 aa4.47□□□□□ -1.69
HMGB1P40-201ENST00000525121 CEBPDP49716 269 aaPredicted RBP4.47□□□□□ -1.69
HMGB1P40-201ENST00000525121 ARF6P62330 175 aa4.47□□□□□ -1.69
HMGB1P40-201ENST00000525121 RPL31P62899 125 aaKnown RBP4.47□□□□□ -1.69
HMGB1P40-201ENST00000525121 GUCA2AQ02747 115 aa4.47□□□□□ -1.69
HMGB1P40-201ENST00000525121 PAX2Q02962 417 aa4.47□□□□□ -1.69
HMGB1P40-201ENST00000525121 SCN1BQ07699 218 aa4.47□□□□□ -1.69
HMGB1P40-201ENST00000525121 TPBGQ13641 420 aa4.47□□□□□ -1.69
HMGB1P40-201ENST00000525121 EDDM3AQ14507 147 aa4.47□□□□□ -1.69
HMGB1P40-201ENST00000525121 ZNF146Q15072 292 aa4.47□□□□□ -1.69
HMGB1P40-201ENST00000525121 GRK1Q15835 563 aa4.47□□□□□ -1.69
HMGB1P40-201ENST00000525121 GLT8D1Q68CQ7 371 aa4.47□□□□□ -1.69
HMGB1P40-201ENST00000525121 NCR3LG1Q68D85 454 aa4.47□□□□□ -1.69
HMGB1P40-201ENST00000525121 AWAT2Q6E213 333 aa4.47□□□□□ -1.69
HMGB1P40-201ENST00000525121 ZNF529Q6P280 563 aa4.47□□□□□ -1.69
HMGB1P40-201ENST00000525121 DUX4L9Q6RFH8 374 aaPredicted RBP4.47□□□□□ -1.69
HMGB1P40-201ENST00000525121 CEACAM19Q7Z692 300 aa4.47□□□□□ -1.69
HMGB1P40-201ENST00000525121 TRAPPC6BQ86SZ2 158 aa4.47□□□□□ -1.69
HMGB1P40-201ENST00000525121 LINC00596Q86U02 117 aa4.47□□□□□ -1.69
HMGB1P40-201ENST00000525121 CDH26Q8IXH8 852 aa4.47□□□□□ -1.69
HMGB1P40-201ENST00000525121 OR8H2Q8N162 312 aa4.47□□□□□ -1.69
HMGB1P40-201ENST00000525121 CD177Q8N6Q3 437 aa4.47□□□□□ -1.69
HMGB1P40-201ENST00000525121 OR52N4Q8NGI2 321 aa4.47□□□□□ -1.69
HMGB1P40-201ENST00000525121 OR51A2Q8NGJ7 313 aa4.47□□□□□ -1.69
HMGB1P40-201ENST00000525121 C8orf46Q8TAG6 207 aa4.47□□□□□ -1.69
HMGB1P40-201ENST00000525121 PHYHIPQ92561 330 aa4.47□□□□□ -1.69
HMGB1P40-201ENST00000525121 SGCDQ92629 289 aa4.47□□□□□ -1.69
HMGB1P40-201ENST00000525121 TMEM203Q969S6 136 aa4.47□□□□□ -1.69
HMGB1P40-201ENST00000525121 UPRTQ96BW1 309 aa4.47□□□□□ -1.69
HMGB1P40-201ENST00000525121 FOXRED1Q96CU9 486 aaPredicted RBP4.47□□□□□ -1.69
HMGB1P40-201ENST00000525121 SNX22Q96L94 193 aa4.47□□□□□ -1.69
HMGB1P40-201ENST00000525121 NR1H4Q96RI1 486 aaPredicted RBP4.47□□□□□ -1.69
HMGB1P40-201ENST00000525121 UQCC2Q9BRT2 126 aa4.47□□□□□ -1.69
HMGB1P40-201ENST00000525121 METTL8Q9H825 291 aaKnown RBP4.47□□□□□ -1.69
HMGB1P40-201ENST00000525121 SEBOXQ9HB31 216 aaPredicted RBP4.47□□□□□ -1.69
HMGB1P40-201ENST00000525121 HMG20AQ9NP66 347 aa4.47□□□□□ -1.69
HMGB1P40-201ENST00000525121 NOX4Q9NPH5 578 aa4.47□□□□□ -1.69
HMGB1P40-201ENST00000525121 ACOT13Q9NPJ3 140 aa4.47□□□□□ -1.69
HMGB1P40-201ENST00000525121 IL36GQ9NZH8 169 aa4.47□□□□□ -1.69
HMGB1P40-201ENST00000525121 DUX4Q9UBX2 424 aa4.47□□□□□ -1.69
HMGB1P40-201ENST00000525121 OPN4Q9UHM6 478 aa4.47□□□□□ -1.69
HMGB1P40-201ENST00000525121 ING4Q9UNL4 249 aa4.47□□□□□ -1.69
HMGB1P40-201ENST00000525121 MRPS28Q9Y2Q9 187 aaKnown RBP4.47□□□□□ -1.69
HMGB1P40-201ENST00000525121 ACANP16112 2415 aa4.47□□□□□ -1.69
HMGB1P40-201ENST00000525121 TRAV8-7A0A075B6U6 113 aa4.46□□□□□ -1.7
HMGB1P40-201ENST00000525121 IGHV3OR16-10A0A075B7F0 116 aa4.46□□□□□ -1.7
HMGB1P40-201ENST00000525121 TRGV10A0A0A0MS01 117 aa4.46□□□□□ -1.7
HMGB1P40-201ENST00000525121 IGKV1-12A0A0C4DH73 117 aa4.46□□□□□ -1.7
HMGB1P40-201ENST00000525121 BTBD17A6NE02 478 aa4.46□□□□□ -1.7
HMGB1P40-201ENST00000525121 F8VVB4 439 aa4.46□□□□□ -1.7
HMGB1P40-201ENST00000525121 F8VWA3 439 aa4.46□□□□□ -1.7
HMGB1P40-201ENST00000525121 K7N7A8 449 aa4.46□□□□□ -1.7
HMGB1P40-201ENST00000525121 PDCD5O14737 125 aa4.46□□□□□ -1.7
HMGB1P40-201ENST00000525121 MGST3O14880 152 aa4.46□□□□□ -1.7
HMGB1P40-201ENST00000525121 OR7C1O76099 320 aaPredicted RBP4.46□□□□□ -1.7
HMGB1P40-201ENST00000525121 TNFAIP8O95379 198 aa4.46□□□□□ -1.7
HMGB1P40-201ENST00000525121 OR2H2O95918 312 aa4.46□□□□□ -1.7
HMGB1P40-201ENST00000525121 PAHP00439 452 aa4.46□□□□□ -1.7
HMGB1P40-201ENST00000525121 IGKV1D-12P01611 117 aa4.46□□□□□ -1.7
HMGB1P40-201ENST00000525121 TFF1P04155 84 aa4.46□□□□□ -1.7
HMGB1P40-201ENST00000525121 SFTPBP07988 381 aa4.46□□□□□ -1.7
HMGB1P40-201ENST00000525121 UBBP0CG47 229 aa4.46□□□□□ -1.7
HMGB1P40-201ENST00000525121 CALCBP10092 127 aa4.46□□□□□ -1.7
HMGB1P40-201ENST00000525121 IGFBP3P17936 291 aaPredicted RBP4.46□□□□□ -1.7
HMGB1P40-201ENST00000525121 AMY2BP19961 511 aa4.46□□□□□ -1.7
HMGB1P40-201ENST00000525121 DUSP1P28562 367 aa4.46□□□□□ -1.7
HMGB1P40-201ENST00000525121 PSMD7P51665 324 aa4.46□□□□□ -1.7
HMGB1P40-201ENST00000525121 ERVFRD-1P60508 538 aa4.46□□□□□ -1.7
HMGB1P40-201ENST00000525121 ZP1P60852 638 aa4.46□□□□□ -1.7
HMGB1P40-201ENST00000525121 RPS11P62280 158 aaKnown RBP eCLIP4.46□□□□□ -1.7
HMGB1P40-201ENST00000525121 MEF2CQ06413 473 aaPredicted RBP4.46□□□□□ -1.7
HMGB1P40-201ENST00000525121 IL13RA2Q14627 380 aa4.46□□□□□ -1.7
HMGB1P40-201ENST00000525121 KRTAP21-3Q3LHN1 58 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 115.1 ms