RNA–Protein interactions for RNA: ENST00000489537.5

SF3A3-208, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 4

Gene SF3A3, Length 891 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-208ENST00000489537 SPTA1P02549 2419 aa5.47□□□□□ -1.53
SF3A3-208ENST00000489537 A0A1B0GW55 424 aa5.47□□□□□ -1.53
SF3A3-208ENST00000489537 OR5H1A6NKK0 313 aa5.47□□□□□ -1.53
SF3A3-208ENST00000489537 ZNF850A8MQ14 1090 aa5.47□□□□□ -1.53
SF3A3-208ENST00000489537 IQCF6A8MYZ5 107 aa5.47□□□□□ -1.53
SF3A3-208ENST00000489537 MCRIP1C9JLW8 97 aa5.47□□□□□ -1.53
SF3A3-208ENST00000489537 J3QT63 122 aa5.47□□□□□ -1.53
SF3A3-208ENST00000489537 K7EM74 188 aa5.47□□□□□ -1.53
SF3A3-208ENST00000489537 OR2A4O95047 310 aa5.47□□□□□ -1.53
SF3A3-208ENST00000489537 DUS4LO95620 317 aaKnown RBP5.47□□□□□ -1.53
SF3A3-208ENST00000489537 DUX4L2P0CJ85 424 aa5.47□□□□□ -1.53
SF3A3-208ENST00000489537 DUX4L3P0CJ86 424 aa5.47□□□□□ -1.53
SF3A3-208ENST00000489537 DUX4L4P0CJ87 422 aa5.47□□□□□ -1.53
SF3A3-208ENST00000489537 DUX4L5P0CJ88 424 aa5.47□□□□□ -1.53
SF3A3-208ENST00000489537 DUX4L6P0CJ89 424 aa5.47□□□□□ -1.53
SF3A3-208ENST00000489537 DUX4L7P0CJ90 424 aa5.47□□□□□ -1.53
SF3A3-208ENST00000489537 GNB3P16520 340 aa5.47□□□□□ -1.53
SF3A3-208ENST00000489537 HLA-GP17693 338 aa5.47□□□□□ -1.53
SF3A3-208ENST00000489537 IGHV1-2P23083 117 aa5.47□□□□□ -1.53
SF3A3-208ENST00000489537 DNASE1P24855 282 aa5.47□□□□□ -1.53
SF3A3-208ENST00000489537 HRH1P35367 487 aa5.47□□□□□ -1.53
SF3A3-208ENST00000489537 UCP2P55851 309 aa5.47□□□□□ -1.53
SF3A3-208ENST00000489537 RBM11P57052 281 aaKnown RBP5.47□□□□□ -1.53
SF3A3-208ENST00000489537 SRPXP78539 464 aa5.47□□□□□ -1.53
SF3A3-208ENST00000489537 FCN2Q15485 313 aa5.47□□□□□ -1.53
SF3A3-208ENST00000489537 ZNF718Q3SXZ3 478 aa5.47□□□□□ -1.53
SF3A3-208ENST00000489537 SCGB2B2Q4G0G5 96 aa5.47□□□□□ -1.53
SF3A3-208ENST00000489537 SPIN3Q5JUX0 258 aa5.47□□□□□ -1.53
SF3A3-208ENST00000489537 OR10K2Q6IF99 312 aa5.47□□□□□ -1.53
SF3A3-208ENST00000489537 ZNF585AQ6P3V2 769 aa5.47□□□□□ -1.53
SF3A3-208ENST00000489537 BHLHA15Q7RTS1 189 aaPredicted RBP5.47□□□□□ -1.53
SF3A3-208ENST00000489537 MRGPRGQ86SM5 289 aa5.47□□□□□ -1.53
SF3A3-208ENST00000489537 MDP1Q86V88 176 aa5.47□□□□□ -1.53
SF3A3-208ENST00000489537 KRTAP19-1Q8IUB9 90 aa5.47□□□□□ -1.53
SF3A3-208ENST00000489537 C12orf45Q8N5I9 185 aaPredicted RBP5.47□□□□□ -1.53
SF3A3-208ENST00000489537 ZNF611Q8N823 705 aa5.47□□□□□ -1.53
SF3A3-208ENST00000489537 ASCC1Q8N9N2 400 aaKnown RBP5.47□□□□□ -1.53
SF3A3-208ENST00000489537 CCDC71LQ8N9Z2 235 aa5.47□□□□□ -1.53
SF3A3-208ENST00000489537 TMEM104Q8NE00 496 aa5.47□□□□□ -1.53
SF3A3-208ENST00000489537 OR2AE1Q8NHA4 323 aa5.47□□□□□ -1.53
SF3A3-208ENST00000489537 LILRB1Q8NHL6 650 aaPredicted RBP5.47□□□□□ -1.53
SF3A3-208ENST00000489537 FAM216AQ8WUB2 273 aa5.47□□□□□ -1.53
SF3A3-208ENST00000489537 OR5P3Q8WZ94 311 aa5.47□□□□□ -1.53
SF3A3-208ENST00000489537 WBP1Q96G27 269 aa5.47□□□□□ -1.53
SF3A3-208ENST00000489537 ARHGAP5-AS1Q96IT6 56 aa5.47□□□□□ -1.53
SF3A3-208ENST00000489537 RNF170Q96K19 258 aa5.47□□□□□ -1.53
SF3A3-208ENST00000489537 OR2A7Q96R45 310 aa5.47□□□□□ -1.53
SF3A3-208ENST00000489537 CITED4Q96RK1 184 aa5.47□□□□□ -1.53
SF3A3-208ENST00000489537 PPA2Q9H2U2 334 aa5.47□□□□□ -1.53
SF3A3-208ENST00000489537 BANF2Q9H503 90 aa5.47□□□□□ -1.53
SF3A3-208ENST00000489537 SEBOXQ9HB31 216 aaPredicted RBP5.47□□□□□ -1.53
SF3A3-208ENST00000489537 RANGRFQ9HD47 186 aaPredicted RBP5.47□□□□□ -1.53
SF3A3-208ENST00000489537 ZNF71Q9NQZ8 489 aaPredicted RBP5.47□□□□□ -1.53
SF3A3-208ENST00000489537 DUX4Q9UBX2 424 aa5.47□□□□□ -1.53
SF3A3-208ENST00000489537 PRSS50Q9UI38 385 aa5.47□□□□□ -1.53
SF3A3-208ENST00000489537 ANXA10Q9UJ72 324 aa5.47□□□□□ -1.53
SF3A3-208ENST00000489537 ST3GAL6Q9Y274 331 aa5.47□□□□□ -1.53
SF3A3-208ENST00000489537 KCNK7Q9Y2U2 307 aa5.47□□□□□ -1.53
SF3A3-208ENST00000489537 STARD10Q9Y365 291 aa5.47□□□□□ -1.53
SF3A3-208ENST00000489537 KIAA1549Q9HCM3 1950 aa5.47□□□□□ -1.53
SF3A3-208ENST00000489537 CNTRLQ7Z7A1 2325 aa5.47□□□□□ -1.53
SF3A3-208ENST00000489537 PCSK5Q92824 1860 aa5.47□□□□□ -1.53
SF3A3-208ENST00000489537 FLNCQ14315 2725 aa5.46□□□□□ -1.53
SF3A3-208ENST00000489537 A0A0B4J293 547 aa5.46□□□□□ -1.54
SF3A3-208ENST00000489537 FOXI3A8MTJ6 420 aaPredicted RBP5.46□□□□□ -1.54
SF3A3-208ENST00000489537 HMSDA8MTL9 139 aa5.46□□□□□ -1.54
SF3A3-208ENST00000489537 B8ZZF3 427 aa5.46□□□□□ -1.54
SF3A3-208ENST00000489537 F5H5P2 479 aa5.46□□□□□ -1.54
SF3A3-208ENST00000489537 NOS1APO75052 506 aaPredicted RBP5.46□□□□□ -1.54
SF3A3-208ENST00000489537 SLC22A5O76082 557 aa5.46□□□□□ -1.54
SF3A3-208ENST00000489537 IFNA7P01567 189 aa5.46□□□□□ -1.54
SF3A3-208ENST00000489537 IGLV1-44P01699 117 aa5.46□□□□□ -1.54
SF3A3-208ENST00000489537 HLA-AP01891 365 aaKnown RBP5.46□□□□□ -1.54
SF3A3-208ENST00000489537 CRYAAP02489 173 aa5.46□□□□□ -1.54
SF3A3-208ENST00000489537 OR4E1P0C645 316 aa5.46□□□□□ -1.54
SF3A3-208ENST00000489537 PATE4P0C8F1 98 aa5.46□□□□□ -1.54
SF3A3-208ENST00000489537 KITLGP21583 273 aa5.46□□□□□ -1.54
SF3A3-208ENST00000489537 GABRR1P24046 479 aa5.46□□□□□ -1.54
SF3A3-208ENST00000489537 CHATP28329 748 aa5.46□□□□□ -1.54
SF3A3-208ENST00000489537 CD34P28906 385 aa5.46□□□□□ -1.54
SF3A3-208ENST00000489537 CALCRP30988 508 aa5.46□□□□□ -1.54
SF3A3-208ENST00000489537 CEACAM8P31997 349 aaPredicted RBP5.46□□□□□ -1.54
SF3A3-208ENST00000489537 ADMP35318 185 aa5.46□□□□□ -1.54
SF3A3-208ENST00000489537 HAAOP46952 286 aa5.46□□□□□ -1.54
SF3A3-208ENST00000489537 IDH3GP51553 393 aaPredicted RBP5.46□□□□□ -1.54
SF3A3-208ENST00000489537 SNU13P55769 128 aaKnown RBP5.46□□□□□ -1.54
SF3A3-208ENST00000489537 UCP3P55916 312 aa5.46□□□□□ -1.54
SF3A3-208ENST00000489537 IL13RA1P78552 427 aa5.46□□□□□ -1.54
SF3A3-208ENST00000489537 PMP22Q01453 160 aa5.46□□□□□ -1.54
SF3A3-208ENST00000489537 SRSF1Q07955 248 aaKnown RBP eCLIP5.46□□□□□ -1.54
SF3A3-208ENST00000489537 CARTPTQ16568 116 aa5.46□□□□□ -1.54
SF3A3-208ENST00000489537 HIKESHIQ53FT3 197 aa5.46□□□□□ -1.54
SF3A3-208ENST00000489537 ESCO2Q56NI9 601 aa5.46□□□□□ -1.54
SF3A3-208ENST00000489537 FAM76BQ5HYJ3 339 aa5.46□□□□□ -1.54
SF3A3-208ENST00000489537 PLAC9Q5JTB6 97 aa5.46□□□□□ -1.54
SF3A3-208ENST00000489537 FAM209AQ5JX71 171 aa5.46□□□□□ -1.54
SF3A3-208ENST00000489537 C9orf135Q5VTT2 229 aa5.46□□□□□ -1.54
SF3A3-208ENST00000489537 SHEQ5VZ18 495 aa5.46□□□□□ -1.54
SF3A3-208ENST00000489537 MBNL2Q5VZF2 373 aaKnown RBP5.46□□□□□ -1.54
SF3A3-208ENST00000489537 MTFR2Q6P444 385 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 106.1 ms