RNA–Protein interactions for RNA: ENST00000470563.5

RBM39-227, Transcript of RNA binding motif protein 39, human

TSL 3

Gene RBM39, Length 384 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM39-227	ENST00000470563	YKT6	O15498	198 aa		4.21	□□□□□ -1.74
RBM39-227	ENST00000470563	LCMT2	O60294	686 aa	Known RBP	4.21	□□□□□ -1.74
RBM39-227	ENST00000470563	POP7	O75817	140 aa	Known RBP	4.21	□□□□□ -1.74
RBM39-227	ENST00000470563	SCO1	O75880	301 aa		4.21	□□□□□ -1.74
RBM39-227	ENST00000470563	SNAPIN	O95295	136 aa		4.21	□□□□□ -1.74
RBM39-227	ENST00000470563	HP	P00738	406 aa		4.21	□□□□□ -1.74
RBM39-227	ENST00000470563	CFD	P00746	253 aa	Predicted RBP	4.21	□□□□□ -1.74
RBM39-227	ENST00000470563	ALDOB	P05062	364 aa		4.21	□□□□□ -1.74
RBM39-227	ENST00000470563	SMIM6	P0DI80	62 aa		4.21	□□□□□ -1.74
RBM39-227	ENST00000470563	CYBA	P13498	195 aa		4.21	□□□□□ -1.74
RBM39-227	ENST00000470563	ZNF44	P15621	663 aa		4.21	□□□□□ -1.74
RBM39-227	ENST00000470563	CSNK2A2	P19784	350 aa	Predicted RBP	4.21	□□□□□ -1.74
RBM39-227	ENST00000470563	SLC2A5	P22732	501 aa		4.21	□□□□□ -1.74
RBM39-227	ENST00000470563	SHC1	P29353	583 aa		4.21	□□□□□ -1.74
RBM39-227	ENST00000470563	OPRD1	P41143	372 aa		4.21	□□□□□ -1.74
RBM39-227	ENST00000470563	RBM34	P42696	430 aa	Known RBP	4.21	□□□□□ -1.74
RBM39-227	ENST00000470563	CAV3	P56539	151 aa		4.21	□□□□□ -1.74
RBM39-227	ENST00000470563	VSX2	P58304	361 aa	Predicted RBP	4.21	□□□□□ -1.74
RBM39-227	ENST00000470563	ACTB	P60709	375 aa		4.21	□□□□□ -1.74
RBM39-227	ENST00000470563	ACTG1	P63261	375 aa		4.21	□□□□□ -1.74
RBM39-227	ENST00000470563	CDK5R1	Q15078	307 aa		4.21	□□□□□ -1.74
RBM39-227	ENST00000470563	ISX	Q2M1V0	245 aa		4.21	□□□□□ -1.74
RBM39-227	ENST00000470563	NDUFAF6	Q330K2	333 aa		4.21	□□□□□ -1.74
RBM39-227	ENST00000470563	ACSM3	Q53FZ2	586 aa		4.21	□□□□□ -1.74
RBM39-227	ENST00000470563	UNQ9370/PRO34162	Q6UXP9	181 aa		4.21	□□□□□ -1.74
RBM39-227	ENST00000470563	LANCL3	Q6ZV70	420 aa		4.21	□□□□□ -1.74
RBM39-227	ENST00000470563	SPAG16	Q8N0X2	631 aa		4.21	□□□□□ -1.74
RBM39-227	ENST00000470563	SVBP	Q8N300	66 aa		4.21	□□□□□ -1.74
RBM39-227	ENST00000470563	RNF175	Q8N4F7	328 aa		4.21	□□□□□ -1.74
RBM39-227	ENST00000470563	ZFP41	Q8N8Y5	198 aa		4.21	□□□□□ -1.74
RBM39-227	ENST00000470563	PXT1	Q8NFP0	134 aa		4.21	□□□□□ -1.74
RBM39-227	ENST00000470563	OR1M1	Q8NGA1	313 aa		4.21	□□□□□ -1.74
RBM39-227	ENST00000470563	OR11G2	Q8NGC1	345 aa		4.21	□□□□□ -1.74
RBM39-227	ENST00000470563	OR6C4	Q8NGE1	309 aa		4.21	□□□□□ -1.74
RBM39-227	ENST00000470563	OR51G2	Q8NGK0	314 aa		4.21	□□□□□ -1.74
RBM39-227	ENST00000470563	OR6N1	Q8NGY5	312 aa		4.21	□□□□□ -1.74
RBM39-227	ENST00000470563	OR2T27	Q8NH04	317 aa		4.21	□□□□□ -1.74
RBM39-227	ENST00000470563	ZNF461	Q8TAF7	563 aa		4.21	□□□□□ -1.74
RBM39-227	ENST00000470563	ZNF671	Q8TAW3	534 aa		4.21	□□□□□ -1.74
RBM39-227	ENST00000470563	THEM6	Q8WUY1	208 aa		4.21	□□□□□ -1.74
RBM39-227	ENST00000470563	HAVCR1	Q96D42	359 aa		4.21	□□□□□ -1.74
RBM39-227	ENST00000470563	S100A16	Q96FQ6	103 aa	Known RBP	4.21	□□□□□ -1.74
RBM39-227	ENST00000470563	C12orf66	Q96MD2	445 aa		4.21	□□□□□ -1.74
RBM39-227	ENST00000470563	LINC00052	Q96N35	136 aa		4.21	□□□□□ -1.74
RBM39-227	ENST00000470563	AMDHD1	Q96NU7	426 aa		4.21	□□□□□ -1.74
RBM39-227	ENST00000470563	CCNL2	Q96S94	520 aa	Predicted RBP	4.21	□□□□□ -1.74
RBM39-227	ENST00000470563	PDCD10	Q9BUL8	212 aa		4.21	□□□□□ -1.74
RBM39-227	ENST00000470563	NKX6-2	Q9C056	277 aa	Predicted RBP	4.21	□□□□□ -1.74
RBM39-227	ENST00000470563	GFRA4	Q9GZZ7	299 aa		4.21	□□□□□ -1.74
RBM39-227	ENST00000470563	HRASLS	Q9HDD0	168 aa		4.21	□□□□□ -1.74
RBM39-227	ENST00000470563	SLC17A5	Q9NRA2	495 aa		4.21	□□□□□ -1.74
RBM39-227	ENST00000470563	RPH3AL	Q9UNE2	315 aa		4.21	□□□□□ -1.74
RBM39-227	ENST00000470563	COPS3	Q9UNS2	423 aa		4.21	□□□□□ -1.74
RBM39-227	ENST00000470563	KANTR	A0A1W2PQU2	76 aa		4.2	□□□□□ -1.74
RBM39-227	ENST00000470563	ZNF98	A6NK75	572 aa		4.2	□□□□□ -1.74
RBM39-227	ENST00000470563		F8W036	122 aa		4.2	□□□□□ -1.74
RBM39-227	ENST00000470563		K7ERQ8	282 aa		4.2	□□□□□ -1.74
RBM39-227	ENST00000470563	BHLHE40	O14503	412 aa		4.2	□□□□□ -1.74
RBM39-227	ENST00000470563	PRRG1	O14668	218 aa		4.2	□□□□□ -1.74
RBM39-227	ENST00000470563	NUDT21	O43809	227 aa	Known RBP	4.2	□□□□□ -1.74
RBM39-227	ENST00000470563	SH3BGRL	O75368	114 aa		4.2	□□□□□ -1.74
RBM39-227	ENST00000470563	IGF2	P01344	180 aa		4.2	□□□□□ -1.74
RBM39-227	ENST00000470563	CD8A	P01732	235 aa		4.2	□□□□□ -1.74
RBM39-227	ENST00000470563	IGHG4	P01861	327 aa		4.2	□□□□□ -1.74
RBM39-227	ENST00000470563	DBI	P07108	87 aa	Known RBP	4.2	□□□□□ -1.74
RBM39-227	ENST00000470563	CD3G	P09693	182 aa		4.2	□□□□□ -1.74
RBM39-227	ENST00000470563	ZNF883	P0CG24	379 aa		4.2	□□□□□ -1.74
RBM39-227	ENST00000470563	SLC25A4	P12235	298 aa		4.2	□□□□□ -1.74
RBM39-227	ENST00000470563	FOLR2	P14207	255 aa		4.2	□□□□□ -1.74
RBM39-227	ENST00000470563	ATF1	P18846	271 aa		4.2	□□□□□ -1.74
RBM39-227	ENST00000470563	CXCL2	P19875	107 aa		4.2	□□□□□ -1.74
RBM39-227	ENST00000470563	RPS4Y1	P22090	263 aa	Known RBP	4.2	□□□□□ -1.74
RBM39-227	ENST00000470563	MPI	P34949	423 aa		4.2	□□□□□ -1.74
RBM39-227	ENST00000470563	SLC11A1	P49279	550 aa		4.2	□□□□□ -1.74
RBM39-227	ENST00000470563	GDI2	P50395	445 aa	Known RBP	4.2	□□□□□ -1.74
RBM39-227	ENST00000470563	RAB13	P51153	203 aa		4.2	□□□□□ -1.74
RBM39-227	ENST00000470563	ARPP19	P56211	112 aa		4.2	□□□□□ -1.74
RBM39-227	ENST00000470563	EIF5A	P63241	154 aa	Known RBP	4.2	□□□□□ -1.74
RBM39-227	ENST00000470563	PJVK	Q0ZLH3	352 aa		4.2	□□□□□ -1.74
RBM39-227	ENST00000470563	NUMA1	Q14980	2115 aa		4.2	□□□□□ -1.74
RBM39-227	ENST00000470563	LTB4R	Q15722	352 aa		4.2	□□□□□ -1.74
RBM39-227	ENST00000470563	MICB	Q29980	383 aa		4.2	□□□□□ -1.74
RBM39-227	ENST00000470563	TMEM225	Q6GV28	225 aa		4.2	□□□□□ -1.74
RBM39-227	ENST00000470563	SLC25A25	Q6KCM7	469 aa		4.2	□□□□□ -1.74
RBM39-227	ENST00000470563	ARL9	Q6T311	187 aa		4.2	□□□□□ -1.74
RBM39-227	ENST00000470563	CXCL17	Q6UXB2	119 aa		4.2	□□□□□ -1.74
RBM39-227	ENST00000470563	OR10H4	Q8NGA5	316 aa		4.2	□□□□□ -1.74
RBM39-227	ENST00000470563	OR6K2	Q8NGY2	324 aa		4.2	□□□□□ -1.74
RBM39-227	ENST00000470563	OR2L2	Q8NH16	312 aa		4.2	□□□□□ -1.74
RBM39-227	ENST00000470563	OR51Q1	Q8NH59	317 aa		4.2	□□□□□ -1.74
RBM39-227	ENST00000470563	OR1S1	Q8NH92	325 aa		4.2	□□□□□ -1.74
RBM39-227	ENST00000470563	LGALS14	Q8TCE9	139 aa		4.2	□□□□□ -1.74
RBM39-227	ENST00000470563	ITLN1	Q8WWA0	313 aa		4.2	□□□□□ -1.74
RBM39-227	ENST00000470563	MRPS31	Q92665	395 aa	Known RBP	4.2	□□□□□ -1.74
RBM39-227	ENST00000470563	RASL10A	Q92737	203 aa		4.2	□□□□□ -1.74
RBM39-227	ENST00000470563	RAB8B	Q92930	207 aa		4.2	□□□□□ -1.74
RBM39-227	ENST00000470563	OTUB2	Q96DC9	234 aa		4.2	□□□□□ -1.74
RBM39-227	ENST00000470563	ARL5B	Q96KC2	179 aa		4.2	□□□□□ -1.74
RBM39-227	ENST00000470563	MS4A4E	Q96PG1	132 aa		4.2	□□□□□ -1.74
RBM39-227	ENST00000470563	MCHR1	Q99705	422 aa		4.2	□□□□□ -1.74

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