RNA–Protein interactions for RNA: ENST00000467885.6

USP39-213, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 338 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-213ENST00000467885 IGHV4-39P01824 125 aa4.98□□□□□ -1.61
USP39-213ENST00000467885 CSTBP04080 98 aaKnown RBP4.98□□□□□ -1.61
USP39-213ENST00000467885 CHRM2P08172 466 aa4.98□□□□□ -1.61
USP39-213ENST00000467885 PPIAL4FP0DN26 164 aa4.98□□□□□ -1.61
USP39-213ENST00000467885 PSG2P11465 335 aa4.98□□□□□ -1.61
USP39-213ENST00000467885 DAOP14920 347 aa4.98□□□□□ -1.61
USP39-213ENST00000467885 MGMTP16455 207 aa4.98□□□□□ -1.61
USP39-213ENST00000467885 RANBP1P43487 201 aa4.98□□□□□ -1.61
USP39-213ENST00000467885 PITPNBP48739 271 aa4.98□□□□□ -1.61
USP39-213ENST00000467885 VEGFCP49767 419 aa4.98□□□□□ -1.61
USP39-213ENST00000467885 CAPZA1P52907 286 aa4.98□□□□□ -1.61
USP39-213ENST00000467885 TESK1Q15569 626 aa4.98□□□□□ -1.61
USP39-213ENST00000467885 ZNF260Q3ZCT1 412 aa4.98□□□□□ -1.61
USP39-213ENST00000467885 CDNFQ49AH0 187 aa4.98□□□□□ -1.61
USP39-213ENST00000467885 PLAC9Q5JTB6 97 aa4.98□□□□□ -1.61
USP39-213ENST00000467885 TEX36Q5VZQ5 186 aa4.98□□□□□ -1.61
USP39-213ENST00000467885 CRYBG3Q68DQ2 2970 aa4.98□□□□□ -1.61
USP39-213ENST00000467885 SFRP4Q6FHJ7 346 aaPredicted RBP4.98□□□□□ -1.61
USP39-213ENST00000467885 LYPD2Q6UXB3 125 aa4.98□□□□□ -1.61
USP39-213ENST00000467885 DNM1P46Q6ZS02 220 aa4.98□□□□□ -1.61
USP39-213ENST00000467885 RTN4RL2Q86UN3 420 aa4.98□□□□□ -1.61
USP39-213ENST00000467885 FAM90A1Q86YD7 464 aa4.98□□□□□ -1.61
USP39-213ENST00000467885 BATF2Q8N1L9 274 aa4.98□□□□□ -1.61
USP39-213ENST00000467885 SAMD12Q8N8I0 201 aa4.98□□□□□ -1.61
USP39-213ENST00000467885 C19orf18Q8NEA5 215 aa4.98□□□□□ -1.61
USP39-213ENST00000467885 DEFB108BQ8NET1 73 aa4.98□□□□□ -1.61
USP39-213ENST00000467885 OR4M1Q8NGD0 313 aa4.98□□□□□ -1.61
USP39-213ENST00000467885 ANGPTL6Q8NI99 470 aa4.98□□□□□ -1.61
USP39-213ENST00000467885 LRRC29Q8WV35 223 aa4.98□□□□□ -1.61
USP39-213ENST00000467885 RAB40AQ8WXH6 277 aa4.98□□□□□ -1.61
USP39-213ENST00000467885 AP3S1Q92572 193 aa4.98□□□□□ -1.61
USP39-213ENST00000467885 FAM46BQ96A09 425 aa4.98□□□□□ -1.61
USP39-213ENST00000467885 CPNE2Q96FN4 548 aaPredicted RBP4.98□□□□□ -1.61
USP39-213ENST00000467885 S100A13Q99584 98 aa4.98□□□□□ -1.61
USP39-213ENST00000467885 MDFIQ99750 246 aa4.98□□□□□ -1.61
USP39-213ENST00000467885 GAL3ST1Q99999 423 aa4.98□□□□□ -1.61
USP39-213ENST00000467885 NICN1Q9BSH3 213 aa4.98□□□□□ -1.61
USP39-213ENST00000467885 FAAP24Q9BTP7 215 aa4.98□□□□□ -1.61
USP39-213ENST00000467885 SELENOIQ9C0D9 397 aa4.98□□□□□ -1.61
USP39-213ENST00000467885 SHARPINQ9H0F6 387 aa4.98□□□□□ -1.61
USP39-213ENST00000467885 ATG5Q9H1Y0 275 aa4.98□□□□□ -1.61
USP39-213ENST00000467885 IFT22Q9H7X7 185 aa4.98□□□□□ -1.61
USP39-213ENST00000467885 ELL3Q9HB65 397 aaPredicted RBP4.98□□□□□ -1.61
USP39-213ENST00000467885 SMURF1Q9HCE7 757 aa4.98□□□□□ -1.61
USP39-213ENST00000467885 DLL4Q9NR61 685 aa4.98□□□□□ -1.61
USP39-213ENST00000467885 RHBDL2Q9NX52 303 aa4.98□□□□□ -1.61
USP39-213ENST00000467885 ELF5Q9UKW6 265 aaPredicted RBP4.98□□□□□ -1.61
USP39-213ENST00000467885 ST3GAL6Q9Y274 331 aa4.98□□□□□ -1.61
USP39-213ENST00000467885 POLDIP2Q9Y2S7 368 aa4.98□□□□□ -1.61
USP39-213ENST00000467885 PPIAL4AQ9Y536 164 aa4.98□□□□□ -1.61
USP39-213ENST00000467885 MAB21L2Q9Y586 359 aa4.98□□□□□ -1.61
USP39-213ENST00000467885 TACC2O95359 2948 aa4.98□□□□□ -1.61
USP39-213ENST00000467885 TRAV18A0A075B6X5 111 aa4.97□□□□□ -1.61
USP39-213ENST00000467885 IGHV3OR15-7A0A075B7D8 119 aa4.97□□□□□ -1.61
USP39-213ENST00000467885 ELOA3CA0A087WX78 387 aaPredicted RBP4.97□□□□□ -1.61
USP39-213ENST00000467885 TRAV24A0A0B4J272 114 aa4.97□□□□□ -1.61
USP39-213ENST00000467885 TMEM82A0PJX8 343 aa4.97□□□□□ -1.61
USP39-213ENST00000467885 METTL21EPA6NDL7 271 aa4.97□□□□□ -1.61
USP39-213ENST00000467885 FAM90A10PA6NDY2 464 aa4.97□□□□□ -1.61
USP39-213ENST00000467885 FAM90A18PA6NE21 464 aa4.97□□□□□ -1.61
USP39-213ENST00000467885 FAM90A16PA6NEW6 464 aa4.97□□□□□ -1.61
USP39-213ENST00000467885 FAM90A20PA6NIJ5 464 aa4.97□□□□□ -1.61
USP39-213ENST00000467885 FAM90A8PA6NJQ4 464 aa4.97□□□□□ -1.61
USP39-213ENST00000467885 FAM90A7PA6NKC0 464 aa4.97□□□□□ -1.61
USP39-213ENST00000467885 OR2AT4A6NND4 320 aa4.97□□□□□ -1.61
USP39-213ENST00000467885 FAM90A22PA8MWA6 464 aa4.97□□□□□ -1.61
USP39-213ENST00000467885 FAM90A12PA8MX19 464 aa4.97□□□□□ -1.61
USP39-213ENST00000467885 FAM90A5PA8MXJ8 464 aa4.97□□□□□ -1.61
USP39-213ENST00000467885 FAM90A23PA8MXZ1 464 aa4.97□□□□□ -1.61
USP39-213ENST00000467885 LGALS8O00214 317 aa4.97□□□□□ -1.61
USP39-213ENST00000467885 SH2D1BO14796 132 aa4.97□□□□□ -1.61
USP39-213ENST00000467885 DEGS1O15121 323 aa4.97□□□□□ -1.61
USP39-213ENST00000467885 RGS5O15539 181 aa4.97□□□□□ -1.61
USP39-213ENST00000467885 CRTAPO75718 401 aaPredicted RBP4.97□□□□□ -1.61
USP39-213ENST00000467885 TPPPO94811 219 aa4.97□□□□□ -1.61
USP39-213ENST00000467885 NXPH2O95156 264 aa4.97□□□□□ -1.61
USP39-213ENST00000467885 CYB5AP00167 134 aa4.97□□□□□ -1.61
USP39-213ENST00000467885 KNG1P01042 644 aa4.97□□□□□ -1.61
USP39-213ENST00000467885 TFF1P04155 84 aa4.97□□□□□ -1.61
USP39-213ENST00000467885 GLAP06280 429 aa4.97□□□□□ -1.61
USP39-213ENST00000467885 WNT2P09544 360 aa4.97□□□□□ -1.61
USP39-213ENST00000467885 FAM90A15PP0C7V4 464 aa4.97□□□□□ -1.61
USP39-213ENST00000467885 FAM90A13PP0C7W8 464 aa4.97□□□□□ -1.61
USP39-213ENST00000467885 FAM90A14PP0C7W9 464 aa4.97□□□□□ -1.61
USP39-213ENST00000467885 FAM90A24PP0C7X0 464 aa4.97□□□□□ -1.61
USP39-213ENST00000467885 MUC1P15941 1255 aaPredicted RBP4.97□□□□□ -1.61
USP39-213ENST00000467885 PRKACAP17612 351 aa4.97□□□□□ -1.61
USP39-213ENST00000467885 SERPINA2P20848 420 aa4.97□□□□□ -1.61
USP39-213ENST00000467885 FUT3P21217 361 aa4.97□□□□□ -1.61
USP39-213ENST00000467885 GLRA1P23415 457 aa4.97□□□□□ -1.61
USP39-213ENST00000467885 CDK2P24941 298 aa4.97□□□□□ -1.61
USP39-213ENST00000467885 GIFP27352 417 aa4.97□□□□□ -1.61
USP39-213ENST00000467885 BLVRBP30043 206 aaPredicted RBP4.97□□□□□ -1.61
USP39-213ENST00000467885 RBM11P57052 281 aaKnown RBP4.97□□□□□ -1.61
USP39-213ENST00000467885 GMFBP60983 142 aa4.97□□□□□ -1.61
USP39-213ENST00000467885 HFEQ30201 348 aa4.97□□□□□ -1.61
USP39-213ENST00000467885 PIGYQ3MUY2 71 aa4.97□□□□□ -1.61
USP39-213ENST00000467885 ARSJQ5FYB0 599 aaPredicted RBP4.97□□□□□ -1.61
USP39-213ENST00000467885 OLFML2AQ68BL7 652 aa4.97□□□□□ -1.61
USP39-213ENST00000467885 CNIH2Q6PI25 160 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms