RNA–Protein interactions for RNA: ENST00000445265.6

TCOF1-206, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,825 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-206ENST00000445265 PGA4P0DJD7 388 aa14.62□□□□□ -0.07
TCOF1-206ENST00000445265 ASCL1P50553 236 aa14.62□□□□□ -0.07
TCOF1-206ENST00000445265 OR8B8Q15620 311 aa14.62□□□□□ -0.07
TCOF1-206ENST00000445265 TMEM41BQ5BJD5 291 aa14.62□□□□□ -0.07
TCOF1-206ENST00000445265 ZNF429Q86V71 674 aa14.62□□□□□ -0.07
TCOF1-206ENST00000445265 SMIM7Q9BQ49 75 aa14.62□□□□□ -0.07
TCOF1-206ENST00000445265 TGIF2Q9GZN2 237 aa14.62□□□□□ -0.07
TCOF1-206ENST00000445265 PIPOXQ9P0Z9 390 aa14.62□□□□□ -0.07
TCOF1-206ENST00000445265 SNRPEP62304 92 aaKnown RBP14.62□□□□□ -0.07
TCOF1-206ENST00000445265 SLC25A47Q6Q0C1 308 aa14.62□□□□□ -0.07
TCOF1-206ENST00000445265 ZNF808Q8N4W9 903 aaPredicted RBP14.62□□□□□ -0.07
TCOF1-206ENST00000445265 CLEC18AA5D8T8 446 aa14.61□□□□□ -0.07
TCOF1-206ENST00000445265 MFNGO00587 321 aa14.61□□□□□ -0.07
TCOF1-206ENST00000445265 GEMIN2O14893 280 aaKnown RBP14.61□□□□□ -0.07
TCOF1-206ENST00000445265 COX5AP20674 150 aa14.61□□□□□ -0.07
TCOF1-206ENST00000445265 PRAMEF5Q5TYX0 476 aa14.61□□□□□ -0.07
TCOF1-206ENST00000445265 PRAMEF6Q5VXH4 476 aa14.61□□□□□ -0.07
TCOF1-206ENST00000445265 CLEC18CQ8NCF0 446 aa14.61□□□□□ -0.07
TCOF1-206ENST00000445265 UCN2Q96RP3 112 aa14.61□□□□□ -0.07
TCOF1-206ENST00000445265 SLC26A1Q9H2B4 701 aa14.61□□□□□ -0.07
TCOF1-206ENST00000445265 OCIAD1Q9NX40 245 aa14.61□□□□□ -0.07
TCOF1-206ENST00000445265 IGHV5-10-1A0A0J9YXX1 117 aa14.61□□□□□ -0.07
TCOF1-206ENST00000445265 CCL3P10147 92 aa14.61□□□□□ -0.07
TCOF1-206ENST00000445265 LIFP15018 202 aa14.61□□□□□ -0.07
TCOF1-206ENST00000445265 EDDM3BP56851 147 aa14.61□□□□□ -0.07
TCOF1-206ENST00000445265 H3F3AP84243 136 aa14.61□□□□□ -0.07
TCOF1-206ENST00000445265 TSPO2Q5TGU0 170 aa14.61□□□□□ -0.07
TCOF1-206ENST00000445265 TMEM211Q6ICI0 200 aa14.61□□□□□ -0.07
TCOF1-206ENST00000445265 TAAR9Q96RI9 348 aa14.61□□□□□ -0.07
TCOF1-206ENST00000445265 BRWD1Q9NSI6 2320 aa14.61□□□□□ -0.07
TCOF1-206ENST00000445265 CDS2O95674 445 aa14.61□□□□□ -0.07
TCOF1-206ENST00000445265 SEC11BP0C7V7 166 aa14.61□□□□□ -0.07
TCOF1-206ENST00000445265 NQO2P16083 231 aa14.61□□□□□ -0.07
TCOF1-206ENST00000445265 FAM58AQ8N1B3 248 aa14.61□□□□□ -0.07
TCOF1-206ENST00000445265 OR11L1Q8NGX0 322 aa14.61□□□□□ -0.07
TCOF1-206ENST00000445265 DUSP15Q9H1R2 295 aaPredicted RBP14.61□□□□□ -0.07
TCOF1-206ENST00000445265 ERRFI1Q9UJM3 462 aaPredicted RBP14.61□□□□□ -0.07
TCOF1-206ENST00000445265 MPPED1O15442 326 aa14.61□□□□□ -0.07
TCOF1-206ENST00000445265 ACKR3P25106 362 aa14.61□□□□□ -0.07
TCOF1-206ENST00000445265 SLC39A7Q92504 469 aa14.61□□□□□ -0.07
TCOF1-206ENST00000445265 SAMD10Q9BYL1 202 aa14.61□□□□□ -0.07
TCOF1-206ENST00000445265 SERTAD4Q9NUC0 356 aa14.61□□□□□ -0.07
TCOF1-206ENST00000445265 CCDC187A0A096LP49 1063 aa14.6□□□□□ -0.07
TCOF1-206ENST00000445265 OR13G1Q8NGZ3 307 aa14.6□□□□□ -0.07
TCOF1-206ENST00000445265 MS4A3Q96HJ5 214 aa14.6□□□□□ -0.07
TCOF1-206ENST00000445265 LHFPL6Q9Y693 200 aa14.6□□□□□ -0.07
TCOF1-206ENST00000445265 PPYP01298 95 aa14.6□□□□□ -0.07
TCOF1-206ENST00000445265 FAM157BP0CG42 384 aa14.6□□□□□ -0.07
TCOF1-206ENST00000445265 PNLIPP16233 465 aa14.6□□□□□ -0.07
TCOF1-206ENST00000445265 FOXL2P58012 376 aa14.6□□□□□ -0.07
TCOF1-206ENST00000445265 RNPS1Q15287 305 aaKnown RBP14.6□□□□□ -0.07
TCOF1-206ENST00000445265 FAM27BQ5VT28 67 aa14.6□□□□□ -0.07
TCOF1-206ENST00000445265 ZNF385AQ96PM9 386 aaKnown RBP14.6□□□□□ -0.07
TCOF1-206ENST00000445265 A0A1W2PP11 408 aa14.6□□□□□ -0.07
TCOF1-206ENST00000445265 GAPDHP04406 335 aaKnown RBP14.6□□□□□ -0.07
TCOF1-206ENST00000445265 VDAC1P21796 283 aa14.6□□□□□ -0.07
TCOF1-206ENST00000445265 MPGP29372 298 aa14.6□□□□□ -0.07
TCOF1-206ENST00000445265 SSPNQ14714 243 aa14.6□□□□□ -0.07
TCOF1-206ENST00000445265 OR2B11Q5JQS5 317 aa14.6□□□□□ -0.07
TCOF1-206ENST00000445265 FAM24BQ8N5W8 94 aa14.6□□□□□ -0.07
TCOF1-206ENST00000445265 THSD7BQ9C0I4 1608 aa14.6□□□□□ -0.07
TCOF1-206ENST00000445265 SLC22A20A6NK97 555 aa14.59□□□□□ -0.07
TCOF1-206ENST00000445265 POLR2GP62487 172 aaKnown RBP eCLIP14.59□□□□□ -0.07
TCOF1-206ENST00000445265 OR8U1Q8NH10 309 aa14.59□□□□□ -0.07
TCOF1-206ENST00000445265 FAM234AQ9H0X4 552 aa14.59□□□□□ -0.07
TCOF1-206ENST00000445265 UFSP2Q9NUQ7 469 aa14.59□□□□□ -0.07
TCOF1-206ENST00000445265 RP1P56715 2156 aa14.59□□□□□ -0.07
TCOF1-206ENST00000445265 OR5B21A6NL26 309 aa14.59□□□□□ -0.07
TCOF1-206ENST00000445265 TMEM14DPA8MWL7 114 aa14.59□□□□□ -0.07
TCOF1-206ENST00000445265 ZNF17P17021 662 aa14.59□□□□□ -0.07
TCOF1-206ENST00000445265 PRSS12P56730 875 aa14.59□□□□□ -0.07
TCOF1-206ENST00000445265 AWAT1Q58HT5 328 aa14.59□□□□□ -0.07
TCOF1-206ENST00000445265 SLC35G3Q8N808 338 aa14.59□□□□□ -0.07
TCOF1-206ENST00000445265 GALMQ96C23 342 aa14.59□□□□□ -0.07
TCOF1-206ENST00000445265 RPUSD4Q96CM3 377 aaKnown RBP14.59□□□□□ -0.07
TCOF1-206ENST00000445265 TMEM38BQ9NVV0 291 aa14.59□□□□□ -0.07
TCOF1-206ENST00000445265 GAR1Q9NY12 217 aaKnown RBP14.59□□□□□ -0.07
TCOF1-206ENST00000445265 EPOPA6NHQ4 379 aa14.59□□□□□ -0.07
TCOF1-206ENST00000445265 IL24Q13007 206 aa14.59□□□□□ -0.07
TCOF1-206ENST00000445265 ACOT6Q3I5F7 207 aaPredicted RBP14.59□□□□□ -0.07
TCOF1-206ENST00000445265 OR4F5Q8NH21 305 aa14.59□□□□□ -0.07
TCOF1-206ENST00000445265 OR4F4Q96R69 305 aa14.59□□□□□ -0.07
TCOF1-206ENST00000445265 IGHV3-64DA0A0J9YX35 117 aa14.59□□□□□ -0.07
TCOF1-206ENST00000445265 CALCRP30988 508 aa14.59□□□□□ -0.07
TCOF1-206ENST00000445265 OR1C1Q15619 314 aa14.59□□□□□ -0.07
TCOF1-206ENST00000445265 ERGIC1Q969X5 290 aa14.59□□□□□ -0.07
TCOF1-206ENST00000445265 NRIP2Q9BQI9 281 aa14.59□□□□□ -0.07
TCOF1-206ENST00000445265 PRF1P14222 555 aa14.58□□□□□ -0.07
TCOF1-206ENST00000445265 NCR3LG1Q68D85 454 aa14.58□□□□□ -0.07
TCOF1-206ENST00000445265 ADGRG7Q96K78 797 aa14.58□□□□□ -0.07
TCOF1-206ENST00000445265 IER2Q9BTL4 223 aa14.58□□□□□ -0.07
TCOF1-206ENST00000445265 OR5AC2Q9NZP5 309 aa14.58□□□□□ -0.07
TCOF1-206ENST00000445265 FNDC1Q4ZHG4 1894 aaPredicted RBP14.58□□□□□ -0.08
TCOF1-206ENST00000445265 IGKV3D-11A0A0A0MRZ8 115 aa14.58□□□□□ -0.08
TCOF1-206ENST00000445265 ARGFXA6NJG6 315 aa14.58□□□□□ -0.08
TCOF1-206ENST00000445265 VHLLQ6RSH7 139 aa14.58□□□□□ -0.08
TCOF1-206ENST00000445265 LYZL2Q7Z4W2 148 aa14.58□□□□□ -0.08
TCOF1-206ENST00000445265 OR2H1Q9GZK4 316 aa14.58□□□□□ -0.08
TCOF1-206ENST00000445265 MEOX2P50222 304 aa14.58□□□□□ -0.08
TCOF1-206ENST00000445265 SULT1A2P50226 295 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 112.5 ms