RNA–Protein interactions for RNA: ENST00000444511.6

VSX1-206, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 1,197 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-206ENST00000444511 CHST6Q9GZX3 395 aa16.99■□□□□ 0.31
VSX1-206ENST00000444511 ZNF702PQ9H963 129 aa16.99■□□□□ 0.31
VSX1-206ENST00000444511 SEBOXQ9HB31 216 aaPredicted RBP16.99■□□□□ 0.31
VSX1-206ENST00000444511 RBFOX1Q9NWB1 397 aaKnown RBP16.99■□□□□ 0.31
VSX1-206ENST00000444511 IL36RNQ9UBH0 155 aa16.99■□□□□ 0.31
VSX1-206ENST00000444511 LINC00312Q9Y6C7 94 aa16.99■□□□□ 0.31
VSX1-206ENST00000444511 MEGF11A6BM72 1044 aa16.98■□□□□ 0.31
VSX1-206ENST00000444511 A6NDX4 124 aa16.98■□□□□ 0.31
VSX1-206ENST00000444511 OPN1MWP04001 364 aa16.98■□□□□ 0.31
VSX1-206ENST00000444511 OCM2P0CE71 109 aa16.98■□□□□ 0.31
VSX1-206ENST00000444511 OCMP0CE72 109 aaPredicted RBP16.98■□□□□ 0.31
VSX1-206ENST00000444511 OPN1MW2P0DN77 364 aa16.98■□□□□ 0.31
VSX1-206ENST00000444511 OPN1MW3P0DN78 364 aa16.98■□□□□ 0.31
VSX1-206ENST00000444511 ZNF20P17024 532 aa16.98■□□□□ 0.31
VSX1-206ENST00000444511 BCL3P20749 454 aa16.98■□□□□ 0.31
VSX1-206ENST00000444511 PRKACBP22694 351 aa16.98■□□□□ 0.31
VSX1-206ENST00000444511 DUSP1P28562 367 aa16.98■□□□□ 0.31
VSX1-206ENST00000444511 NPBWR2P48146 333 aa16.98■□□□□ 0.31
VSX1-206ENST00000444511 MTCP1P56278 107 aa16.98■□□□□ 0.31
VSX1-206ENST00000444511 ZNF91Q05481 1191 aa16.98■□□□□ 0.31
VSX1-206ENST00000444511 HABP2Q14520 560 aaPredicted RBP16.98■□□□□ 0.31
VSX1-206ENST00000444511 LDLRAD2Q5SZI1 272 aa16.98■□□□□ 0.31
VSX1-206ENST00000444511 CCBE1Q6UXH8 406 aaPredicted RBP16.98■□□□□ 0.31
VSX1-206ENST00000444511 OR52N4Q8NGI2 321 aa16.98■□□□□ 0.31
VSX1-206ENST00000444511 OR2G2Q8NGZ5 317 aa16.98■□□□□ 0.31
VSX1-206ENST00000444511 TRUB1Q8WWH5 349 aaKnown RBP16.98■□□□□ 0.31
VSX1-206ENST00000444511 GLS2Q9UI32 602 aa16.98■□□□□ 0.31
VSX1-206ENST00000444511 SESN1Q9Y6P5 492 aa16.98■□□□□ 0.31
VSX1-206ENST00000444511 TRBV2A0A0J9YWF9 115 aa16.97■□□□□ 0.31
VSX1-206ENST00000444511 DAPL1A0PJW8 107 aa16.97■□□□□ 0.31
VSX1-206ENST00000444511 F2RL2O00254 374 aa16.97■□□□□ 0.31
VSX1-206ENST00000444511 PRKACAP17612 351 aa16.97■□□□□ 0.31
VSX1-206ENST00000444511 ATF1P18846 271 aa16.97■□□□□ 0.31
VSX1-206ENST00000444511 AZGP1P25311 298 aaKnown RBP16.97■□□□□ 0.31
VSX1-206ENST00000444511 SNU13P55769 128 aaKnown RBP16.97■□□□□ 0.31
VSX1-206ENST00000444511 LHFPL2Q6ZUX7 228 aa16.97■□□□□ 0.31
VSX1-206ENST00000444511 UTS2BQ765I0 119 aa16.97■□□□□ 0.31
VSX1-206ENST00000444511 KCTD20Q7Z5Y7 419 aa16.97■□□□□ 0.31
VSX1-206ENST00000444511 FGGYQ96C11 551 aa16.97■□□□□ 0.31
VSX1-206ENST00000444511 RNFT2Q96EX2 444 aa16.97■□□□□ 0.31
VSX1-206ENST00000444511 HILPDAQ9Y5L2 63 aa16.97■□□□□ 0.31
VSX1-206ENST00000444511 ORC6Q9Y5N6 252 aa16.97■□□□□ 0.31
VSX1-206ENST00000444511 IGKV1-9A0A0C4DH69 117 aa16.96■□□□□ 0.31
VSX1-206ENST00000444511 MGST3O14880 152 aa16.96■□□□□ 0.31
VSX1-206ENST00000444511 PSPNO60542 156 aa16.96■□□□□ 0.31
VSX1-206ENST00000444511 ENTPD6O75354 484 aa16.96■□□□□ 0.31
VSX1-206ENST00000444511 FBXO24O75426 580 aa16.96■□□□□ 0.31
VSX1-206ENST00000444511 CALCBP10092 127 aa16.96■□□□□ 0.31
VSX1-206ENST00000444511 DYNLT3P51808 116 aa16.96■□□□□ 0.31
VSX1-206ENST00000444511 SLC34A1Q06495 639 aa16.96■□□□□ 0.31
VSX1-206ENST00000444511 ZNF146Q15072 292 aa16.96■□□□□ 0.31
VSX1-206ENST00000444511 SPIN3Q5JUX0 258 aa16.96■□□□□ 0.31
VSX1-206ENST00000444511 MINOS1Q5TGZ0 78 aa16.96■□□□□ 0.31
VSX1-206ENST00000444511 TRAPPC6BQ86SZ2 158 aa16.96■□□□□ 0.31
VSX1-206ENST00000444511 Q8N2B8 174 aa16.96■□□□□ 0.31
VSX1-206ENST00000444511 NDNFQ8TB73 568 aa16.96■□□□□ 0.31
VSX1-206ENST00000444511 RNF166Q96A37 237 aaPredicted RBP16.96■□□□□ 0.31
VSX1-206ENST00000444511 SPSB1Q96BD6 273 aa16.96■□□□□ 0.31
VSX1-206ENST00000444511 PRSS22Q9GZN4 317 aa16.96■□□□□ 0.31
VSX1-206ENST00000444511 SERTAD4Q9NUC0 356 aa16.96■□□□□ 0.31
VSX1-206ENST00000444511 FRRS1LQ9P0K9 344 aa16.96■□□□□ 0.31
VSX1-206ENST00000444511 MINOS1-NBL1R4GNA1 71 aa16.96■□□□□ 0.31
VSX1-206ENST00000444511 IGHV2-26A0A0B4J1V2 119 aa16.95■□□□□ 0.3
VSX1-206ENST00000444511 G3V4G9 280 aa16.95■□□□□ 0.3
VSX1-206ENST00000444511 SLC16A6O15403 523 aa16.95■□□□□ 0.3
VSX1-206ENST00000444511 PEX14O75381 377 aa16.95■□□□□ 0.3
VSX1-206ENST00000444511 ISG15P05161 165 aa16.95■□□□□ 0.3
VSX1-206ENST00000444511 HTR1AP08908 422 aa16.95■□□□□ 0.3
VSX1-206ENST00000444511 ARSJQ5FYB0 599 aaPredicted RBP16.95■□□□□ 0.3
VSX1-206ENST00000444511 ZBTB49Q6ZSB9 765 aa16.95■□□□□ 0.3
VSX1-206ENST00000444511 LYG1Q8N1E2 194 aa16.95■□□□□ 0.3
VSX1-206ENST00000444511 OR4S1Q8NGB4 309 aa16.95■□□□□ 0.3
VSX1-206ENST00000444511 PYDC1Q8WXC3 89 aa16.95■□□□□ 0.3
VSX1-206ENST00000444511 OPALINQ96PE5 141 aa16.95■□□□□ 0.3
VSX1-206ENST00000444511 CLEC7AQ9BXN2 247 aa16.95■□□□□ 0.3
VSX1-206ENST00000444511 TMEM133Q9H2Q1 129 aa16.95■□□□□ 0.3
VSX1-206ENST00000444511 SIRPB1O00241 398 aa16.94■□□□□ 0.3
VSX1-206ENST00000444511 ERP29P30040 261 aaKnown RBP16.94■□□□□ 0.3
VSX1-206ENST00000444511 OR3A1P47881 315 aa16.94■□□□□ 0.3
VSX1-206ENST00000444511 P2RX3P56373 397 aa16.94■□□□□ 0.3
VSX1-206ENST00000444511 NANOS3P60323 173 aaKnown RBP16.94■□□□□ 0.3
VSX1-206ENST00000444511 PDZK1IP1Q13113 114 aa16.94■□□□□ 0.3
VSX1-206ENST00000444511 NSUN5P1Q3KNT7 163 aa16.94■□□□□ 0.3
VSX1-206ENST00000444511 MEDAGQ5VYS4 303 aa16.94■□□□□ 0.3
VSX1-206ENST00000444511 FDX2Q6P4F2 183 aa16.94■□□□□ 0.3
VSX1-206ENST00000444511 RFT1Q96AA3 541 aa16.94■□□□□ 0.3
VSX1-206ENST00000444511 HRASLS5Q96KN8 279 aa16.94■□□□□ 0.3
VSX1-206ENST00000444511 MBOAT4Q96T53 435 aa16.94■□□□□ 0.3
VSX1-206ENST00000444511 HMG20AQ9NP66 347 aa16.94■□□□□ 0.3
VSX1-206ENST00000444511 EXOSC4Q9NPD3 245 aaKnown RBP16.94■□□□□ 0.3
VSX1-206ENST00000444511 HHLA2Q9UM44 414 aa16.94■□□□□ 0.3
VSX1-206ENST00000444511 GSTK1Q9Y2Q3 226 aa16.94■□□□□ 0.3
VSX1-206ENST00000444511 UBE2J1Q9Y385 318 aaPredicted RBP16.94■□□□□ 0.3
VSX1-206ENST00000444511 PCDHGB5Q9Y5G0 923 aa16.94■□□□□ 0.3
VSX1-206ENST00000444511 H3BUI4 141 aa16.93■□□□□ 0.3
VSX1-206ENST00000444511 SH2D1BO14796 132 aa16.93■□□□□ 0.3
VSX1-206ENST00000444511 ALPLP05186 524 aa16.93■□□□□ 0.3
VSX1-206ENST00000444511 CD28P10747 220 aa16.93■□□□□ 0.3
VSX1-206ENST00000444511 JUNBP17275 347 aaPredicted RBP16.93■□□□□ 0.3
VSX1-206ENST00000444511 CCR9P51686 369 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 99.6 ms