RNA–Protein interactions for RNA: ENST00000417040.1

UBR4-205, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-205ENST00000417040 OR2V1Q8NHB1 315 aa10.69□□□□□ -0.7
UBR4-205ENST00000417040 MRGPRDQ8TDS7 321 aa10.69□□□□□ -0.7
UBR4-205ENST00000417040 FKBP11Q9NYL4 201 aa10.69□□□□□ -0.7
UBR4-205ENST00000417040 OPN4Q9UHM6 478 aa10.69□□□□□ -0.7
UBR4-205ENST00000417040 NEU3Q9UQ49 428 aa10.69□□□□□ -0.7
UBR4-205ENST00000417040 SMIM17P0DL12 118 aa10.68□□□□□ -0.7
UBR4-205ENST00000417040 BCL3P20749 454 aa10.68□□□□□ -0.7
UBR4-205ENST00000417040 GALP22466 123 aa10.68□□□□□ -0.7
UBR4-205ENST00000417040 BSXQ3C1V8 233 aa10.68□□□□□ -0.7
UBR4-205ENST00000417040 MESTQ5EB52 335 aa10.68□□□□□ -0.7
UBR4-205ENST00000417040 RFLNBQ8N5W9 214 aa10.68□□□□□ -0.7
UBR4-205ENST00000417040 OR1B1Q8NGR6 318 aa10.68□□□□□ -0.7
UBR4-205ENST00000417040 PP6455Q8WZ26 134 aa10.68□□□□□ -0.7
UBR4-205ENST00000417040 OR10C1Q96KK4 312 aa10.68□□□□□ -0.7
UBR4-205ENST00000417040 PKIAP61925 76 aa10.68□□□□□ -0.7
UBR4-205ENST00000417040 FUT7Q11130 342 aa10.68□□□□□ -0.7
UBR4-205ENST00000417040 FNDC7Q5VTL7 733 aa10.68□□□□□ -0.7
UBR4-205ENST00000417040 C1QL3Q5VWW1 255 aa10.68□□□□□ -0.7
UBR4-205ENST00000417040 SFTPA1Q8IWL2 248 aa10.68□□□□□ -0.7
UBR4-205ENST00000417040 DUXBA0A1W2PPF3 345 aa10.68□□□□□ -0.7
UBR4-205ENST00000417040 CRHP06850 196 aa10.68□□□□□ -0.7
UBR4-205ENST00000417040 PGA3P0DJD8 388 aa10.68□□□□□ -0.7
UBR4-205ENST00000417040 C8orf82Q6P1X6 216 aaPredicted RBP10.68□□□□□ -0.7
UBR4-205ENST00000417040 RAB40CQ96S21 281 aa10.68□□□□□ -0.7
UBR4-205ENST00000417040 LRRC61Q9BV99 259 aa10.68□□□□□ -0.7
UBR4-205ENST00000417040 TMEM140Q9NV12 185 aa10.68□□□□□ -0.7
UBR4-205ENST00000417040 TAAR3PQ9P1P4 343 aa10.68□□□□□ -0.7
UBR4-205ENST00000417040 TRAV8-7A0A075B6U6 113 aa10.68□□□□□ -0.7
UBR4-205ENST00000417040 FAM74A7A6NL05 159 aa10.68□□□□□ -0.7
UBR4-205ENST00000417040 C11orf94C9JXX5 98 aa10.68□□□□□ -0.7
UBR4-205ENST00000417040 J3KRW8 73 aa10.68□□□□□ -0.7
UBR4-205ENST00000417040 CELA2BP08218 269 aaPredicted RBP10.68□□□□□ -0.7
UBR4-205ENST00000417040 SMIM6P0DI80 62 aa10.68□□□□□ -0.7
UBR4-205ENST00000417040 GLB1P16278 677 aa10.68□□□□□ -0.7
UBR4-205ENST00000417040 DSCR4P56555 118 aaPredicted RBP10.68□□□□□ -0.7
UBR4-205ENST00000417040 FAM74A3Q4VXF1 159 aa10.68□□□□□ -0.7
UBR4-205ENST00000417040 TGIF2LYQ8IUE0 185 aa10.68□□□□□ -0.7
UBR4-205ENST00000417040 TTC9Q92623 222 aa10.68□□□□□ -0.7
UBR4-205ENST00000417040 FGF14Q92915 247 aa10.68□□□□□ -0.7
UBR4-205ENST00000417040 WDR13Q9H1Z4 485 aa10.68□□□□□ -0.7
UBR4-205ENST00000417040 NRAPQ86VF7 1730 aa10.68□□□□□ -0.7
UBR4-205ENST00000417040 ZNF98A6NK75 572 aa10.67□□□□□ -0.7
UBR4-205ENST00000417040 ERVH48-1M5A8F1 160 aa10.67□□□□□ -0.7
UBR4-205ENST00000417040 CTDSPLO15194 276 aa10.67□□□□□ -0.7
UBR4-205ENST00000417040 ZNHIT1O43257 154 aa10.67□□□□□ -0.7
UBR4-205ENST00000417040 LYZL2Q7Z4W2 148 aa10.67□□□□□ -0.7
UBR4-205ENST00000417040 TOX2Q96NM4 488 aa10.67□□□□□ -0.7
UBR4-205ENST00000417040 CXorf65A6NEN9 183 aa10.67□□□□□ -0.7
UBR4-205ENST00000417040 CYC1P08574 325 aa10.67□□□□□ -0.7
UBR4-205ENST00000417040 ZNF32P17041 273 aa10.67□□□□□ -0.7
UBR4-205ENST00000417040 RGS7BPQ6MZT1 257 aaPredicted RBP10.67□□□□□ -0.7
UBR4-205ENST00000417040 TMEM91Q6ZNR0 172 aa10.67□□□□□ -0.7
UBR4-205ENST00000417040 ZNF683Q8IZ20 524 aa10.67□□□□□ -0.7
UBR4-205ENST00000417040 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.67□□□□□ -0.7
UBR4-205ENST00000417040 MTCH2Q9Y6C9 303 aa10.67□□□□□ -0.7
UBR4-205ENST00000417040 TRGV10A0A0A0MS01 117 aa10.67□□□□□ -0.7
UBR4-205ENST00000417040 RAB29O14966 203 aa10.67□□□□□ -0.7
UBR4-205ENST00000417040 APELAP0DMC3 54 aa10.67□□□□□ -0.7
UBR4-205ENST00000417040 S100A4P26447 101 aaKnown RBP10.67□□□□□ -0.7
UBR4-205ENST00000417040 ACAA2P42765 397 aaKnown RBP10.67□□□□□ -0.7
UBR4-205ENST00000417040 IER3P46695 156 aa10.67□□□□□ -0.7
UBR4-205ENST00000417040 SMIM21Q3B7S5 101 aa10.67□□□□□ -0.7
UBR4-205ENST00000417040 TMEM196Q5HYL7 178 aa10.67□□□□□ -0.7
UBR4-205ENST00000417040 SLC35E4Q6ICL7 350 aa10.67□□□□□ -0.7
UBR4-205ENST00000417040 C16orf82Q7Z2V1 217 aa10.67□□□□□ -0.7
UBR4-205ENST00000417040 SSMEM1Q8WWF3 244 aa10.67□□□□□ -0.7
UBR4-205ENST00000417040 HDHD3Q9BSH5 251 aaPredicted RBP10.67□□□□□ -0.7
UBR4-205ENST00000417040 ITGB4P16144 1822 aa10.67□□□□□ -0.7
UBR4-205ENST00000417040 NKX2-2O95096 273 aa10.67□□□□□ -0.7
UBR4-205ENST00000417040 POU2F2P09086 479 aa10.67□□□□□ -0.7
UBR4-205ENST00000417040 FZD5Q13467 585 aa10.67□□□□□ -0.7
UBR4-205ENST00000417040 CYB5R2Q6BCY4 276 aa10.67□□□□□ -0.7
UBR4-205ENST00000417040 FLRT3Q9NZU0 649 aa10.67□□□□□ -0.7
UBR4-205ENST00000417040 MMP17Q9ULZ9 603 aa10.67□□□□□ -0.7
UBR4-205ENST00000417040 HDGFL3Q9Y3E1 203 aa10.67□□□□□ -0.7
UBR4-205ENST00000417040 R4GN57 208 aa10.67□□□□□ -0.7
UBR4-205ENST00000417040 A0A1W2PRD5 423 aa10.67□□□□□ -0.7
UBR4-205ENST00000417040 A0A1W2PRF3 423 aa10.67□□□□□ -0.7
UBR4-205ENST00000417040 A0A1W2PRM7 423 aa10.67□□□□□ -0.7
UBR4-205ENST00000417040 ZNF253O75346 499 aa10.67□□□□□ -0.7
UBR4-205ENST00000417040 PTCRAQ6ISU1 281 aaPredicted RBP10.67□□□□□ -0.7
UBR4-205ENST00000417040 NUFIP2Q7Z417 695 aaKnown RBP10.67□□□□□ -0.7
UBR4-205ENST00000417040 NEIL1Q96FI4 390 aaPredicted RBP10.67□□□□□ -0.7
UBR4-205ENST00000417040 WDR61Q9GZS3 305 aaKnown RBP10.67□□□□□ -0.7
UBR4-205ENST00000417040 TRIP11Q15643 1979 aa10.67□□□□□ -0.7
UBR4-205ENST00000417040 TRAV39A0A0B4J263 110 aa10.66□□□□□ -0.7
UBR4-205ENST00000417040 LRRC3CA6NJW4 275 aa10.66□□□□□ -0.7
UBR4-205ENST00000417040 RPL7P18124 248 aaKnown RBP10.66□□□□□ -0.7
UBR4-205ENST00000417040 CD300LDQ6UXZ3 194 aa10.66□□□□□ -0.7
UBR4-205ENST00000417040 BHLHA9Q7RTU4 235 aa10.66□□□□□ -0.7
UBR4-205ENST00000417040 OR10A7Q8NGE5 316 aa10.66□□□□□ -0.7
UBR4-205ENST00000417040 PTP4A1Q93096 173 aa10.66□□□□□ -0.7
UBR4-205ENST00000417040 FLYWCH2Q96CP2 140 aaKnown RBP10.66□□□□□ -0.7
UBR4-205ENST00000417040 KLK13Q9UKR3 277 aa10.66□□□□□ -0.7
UBR4-205ENST00000417040 COL22A1Q8NFW1 1626 aaPredicted RBP10.66□□□□□ -0.7
UBR4-205ENST00000417040 HRKO00198 91 aa10.66□□□□□ -0.7
UBR4-205ENST00000417040 OGG1O15527 345 aa10.66□□□□□ -0.7
UBR4-205ENST00000417040 PAGE4O60829 102 aa10.66□□□□□ -0.7
UBR4-205ENST00000417040 P2RY1P47900 373 aa10.66□□□□□ -0.7
UBR4-205ENST00000417040 MICBQ29980 383 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms