RNA–Protein interactions for RNA: ENST00000409909.7

LSM5-204, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-204ENST00000409909 HAND1O96004 215 aa14.41□□□□□ -0.1
LSM5-204ENST00000409909 PAHP00439 452 aa14.41□□□□□ -0.1
LSM5-204ENST00000409909 PAX6P26367 422 aa14.41□□□□□ -0.1
LSM5-204ENST00000409909 ETV1P50549 477 aa14.41□□□□□ -0.1
LSM5-204ENST00000409909 ZNF691Q5VV52 312 aa14.41□□□□□ -0.1
LSM5-204ENST00000409909 TCF23Q7RTU1 214 aa14.41□□□□□ -0.1
LSM5-204ENST00000409909 OR8H2Q8N162 312 aa14.41□□□□□ -0.1
LSM5-204ENST00000409909 BEND2Q8NDZ0 799 aa14.41□□□□□ -0.1
LSM5-204ENST00000409909 OR52N4Q8NGI2 321 aa14.41□□□□□ -0.1
LSM5-204ENST00000409909 OR5AK2Q8NH90 309 aa14.41□□□□□ -0.1
LSM5-204ENST00000409909 CNIH3Q8TBE1 160 aa14.41□□□□□ -0.1
LSM5-204ENST00000409909 SNX22Q96L94 193 aa14.41□□□□□ -0.1
LSM5-204ENST00000409909 JAM3Q9BX67 310 aa14.41□□□□□ -0.1
LSM5-204ENST00000409909 ZCCHC4Q9H5U6 513 aa14.41□□□□□ -0.1
LSM5-204ENST00000409909 HEXA-AS1Q9H8Q6 139 aa14.41□□□□□ -0.1
LSM5-204ENST00000409909 VPREB3Q9UKI3 123 aa14.41□□□□□ -0.1
LSM5-204ENST00000409909 CLPSL1A2RUU4 121 aa14.4□□□□□ -0.1
LSM5-204ENST00000409909 TMEM212A6NML5 194 aa14.4□□□□□ -0.1
LSM5-204ENST00000409909 PSPNO60542 156 aa14.4□□□□□ -0.1
LSM5-204ENST00000409909 CYB5AP00167 134 aa14.4□□□□□ -0.1
LSM5-204ENST00000409909 PRKACAP17612 351 aa14.4□□□□□ -0.1
LSM5-204ENST00000409909 COX7A1P24310 79 aa14.4□□□□□ -0.1
LSM5-204ENST00000409909 BMXP51813 675 aa14.4□□□□□ -0.1
LSM5-204ENST00000409909 GBX2P52951 348 aaPredicted RBP14.4□□□□□ -0.1
LSM5-204ENST00000409909 SNU13P55769 128 aaKnown RBP14.4□□□□□ -0.1
LSM5-204ENST00000409909 EDDM3BP56851 147 aa14.4□□□□□ -0.1
LSM5-204ENST00000409909 MRPL28Q13084 256 aaKnown RBP14.4□□□□□ -0.1
LSM5-204ENST00000409909 ZNF146Q15072 292 aa14.4□□□□□ -0.1
LSM5-204ENST00000409909 PRR31Q5SQ13 230 aa14.4□□□□□ -0.1
LSM5-204ENST00000409909 OLFML2AQ68BL7 652 aa14.4□□□□□ -0.1
LSM5-204ENST00000409909 XAF1Q6GPH4 301 aa14.4□□□□□ -0.1
LSM5-204ENST00000409909 ZNF782Q6ZMW2 699 aaPredicted RBP14.4□□□□□ -0.1
LSM5-204ENST00000409909 GDPGP1Q6ZNW5 385 aa14.4□□□□□ -0.1
LSM5-204ENST00000409909 GDPD3Q7L5L3 318 aa14.4□□□□□ -0.1
LSM5-204ENST00000409909 PARP16Q8N5Y8 322 aa14.4□□□□□ -0.1
LSM5-204ENST00000409909 ZSCAN4Q8NAM6 433 aaPredicted RBP14.4□□□□□ -0.1
LSM5-204ENST00000409909 OR5D18Q8NGL1 313 aa14.4□□□□□ -0.1
LSM5-204ENST00000409909 LINC01006Q8NI28 216 aa14.4□□□□□ -0.1
LSM5-204ENST00000409909 WFDC12Q8WWY7 111 aa14.4□□□□□ -0.1
LSM5-204ENST00000409909 CHST6Q9GZX3 395 aa14.4□□□□□ -0.1
LSM5-204ENST00000409909 HMG20AQ9NP66 347 aa14.4□□□□□ -0.1
LSM5-204ENST00000409909 hCG_1809904A0A1W2PP81 198 aa14.39□□□□□ -0.11
LSM5-204ENST00000409909 A0A1W2PPE2 198 aa14.39□□□□□ -0.11
LSM5-204ENST00000409909 A0A1W2PR64 198 aa14.39□□□□□ -0.11
LSM5-204ENST00000409909 A0A1W2PRV1 198 aa14.39□□□□□ -0.11
LSM5-204ENST00000409909 CCDC159P0C7I6 412 aa14.39□□□□□ -0.11
LSM5-204ENST00000409909 OCM2P0CE71 109 aa14.39□□□□□ -0.11
LSM5-204ENST00000409909 OCMP0CE72 109 aaPredicted RBP14.39□□□□□ -0.11
LSM5-204ENST00000409909 ZNF728P0DKX0 622 aa14.39□□□□□ -0.11
LSM5-204ENST00000409909 PEX2P28328 305 aa14.39□□□□□ -0.11
LSM5-204ENST00000409909 KRTAP10-3P60369 221 aa14.39□□□□□ -0.11
LSM5-204ENST00000409909 EDDM3AQ14507 147 aa14.39□□□□□ -0.11
LSM5-204ENST00000409909 RCN1Q15293 331 aa14.39□□□□□ -0.11
LSM5-204ENST00000409909 Q6ZSV7 163 aa14.39□□□□□ -0.11
LSM5-204ENST00000409909 SERPINA12Q8IW75 414 aa14.39□□□□□ -0.11
LSM5-204ENST00000409909 TPRX1Q8N7U7 411 aa14.39□□□□□ -0.11
LSM5-204ENST00000409909 OR4S1Q8NGB4 309 aa14.39□□□□□ -0.11
LSM5-204ENST00000409909 OR5D14Q8NGL3 314 aa14.39□□□□□ -0.11
LSM5-204ENST00000409909 CYGBQ8WWM9 190 aa14.39□□□□□ -0.11
LSM5-204ENST00000409909 RGP1Q92546 391 aaPredicted RBP14.39□□□□□ -0.11
LSM5-204ENST00000409909 MEGF9Q9H1U4 602 aa14.39□□□□□ -0.11
LSM5-204ENST00000409909 ZNF696Q9H7X3 374 aa14.39□□□□□ -0.11
LSM5-204ENST00000409909 CMYA5Q8N3K9 4069 aa14.39□□□□□ -0.11
LSM5-204ENST00000409909 BTBD17A6NE02 478 aa14.38□□□□□ -0.11
LSM5-204ENST00000409909 H3BUX3 64 aa14.38□□□□□ -0.11
LSM5-204ENST00000409909 KDM4BO94953 1096 aa14.38□□□□□ -0.11
LSM5-204ENST00000409909 ALX3O95076 343 aa14.38□□□□□ -0.11
LSM5-204ENST00000409909 GABRR1P24046 479 aa14.38□□□□□ -0.11
LSM5-204ENST00000409909 OR3A1P47881 315 aa14.38□□□□□ -0.11
LSM5-204ENST00000409909 ADARB1P78563 741 aaKnown RBP14.38□□□□□ -0.11
LSM5-204ENST00000409909 MEF2CQ06413 473 aaPredicted RBP14.38□□□□□ -0.11
LSM5-204ENST00000409909 GRK1Q15835 563 aa14.38□□□□□ -0.11
LSM5-204ENST00000409909 SPIN3Q5JUX0 258 aa14.38□□□□□ -0.11
LSM5-204ENST00000409909 OR2G6Q5TZ20 316 aa14.38□□□□□ -0.11
LSM5-204ENST00000409909 ASPHD2Q6ICH7 369 aa14.38□□□□□ -0.11
LSM5-204ENST00000409909 PACRGLQ8N7B6 248 aa14.38□□□□□ -0.11
LSM5-204ENST00000409909 OR5R1Q8NH85 324 aa14.38□□□□□ -0.11
LSM5-204ENST00000409909 SSX3Q99909 188 aa14.38□□□□□ -0.11
LSM5-204ENST00000409909 COMMD4Q9H0A8 199 aa14.38□□□□□ -0.11
LSM5-204ENST00000409909 DHDHQ9UQ10 334 aa14.38□□□□□ -0.11
LSM5-204ENST00000409909 SIRT4Q9Y6E7 314 aaPredicted RBP14.38□□□□□ -0.11
LSM5-204ENST00000409909 ANKRD65E5RJM6 399 aa14.37□□□□□ -0.11
LSM5-204ENST00000409909 SIRPB1O00241 398 aa14.37□□□□□ -0.11
LSM5-204ENST00000409909 SULT1B1O43704 296 aa14.37□□□□□ -0.11
LSM5-204ENST00000409909 RBP4P02753 201 aa14.37□□□□□ -0.11
LSM5-204ENST00000409909 RPSAP08865 295 aaKnown RBP14.37□□□□□ -0.11
LSM5-204ENST00000409909 DCKP27707 260 aa14.37□□□□□ -0.11
LSM5-204ENST00000409909 ZP1P60852 638 aa14.37□□□□□ -0.11
LSM5-204ENST00000409909 IL18R1Q13478 541 aa14.37□□□□□ -0.11
LSM5-204ENST00000409909 KISS1Q15726 138 aa14.37□□□□□ -0.11
LSM5-204ENST00000409909 TTC23Q5W5X9 447 aa14.37□□□□□ -0.11
LSM5-204ENST00000409909 ZNF529Q6P280 563 aa14.37□□□□□ -0.11
LSM5-204ENST00000409909 LHFPL4Q7Z7J7 247 aa14.37□□□□□ -0.11
LSM5-204ENST00000409909 SAXO1Q8IYX7 474 aa14.37□□□□□ -0.11
LSM5-204ENST00000409909 RPS4Y2Q8TD47 263 aa14.37□□□□□ -0.11
LSM5-204ENST00000409909 TSEN15Q8WW01 171 aaKnown RBP14.37□□□□□ -0.11
LSM5-204ENST00000409909 CLEC2DQ9UHP7 191 aa14.37□□□□□ -0.11
LSM5-204ENST00000409909 GSTK1Q9Y2Q3 226 aa14.37□□□□□ -0.11
LSM5-204ENST00000409909 RNF114Q9Y508 228 aa14.37□□□□□ -0.11
LSM5-204ENST00000409909 hADV38S2A0JD32 116 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms