RNA–Protein interactions for RNA: ENST00000407019.6

NUP50-203, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 2,059 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-203ENST00000407019 TMEM187Q14656 261 aa14.53□□□□□ -0.08
NUP50-203ENST00000407019 TMEM211Q6ICI0 200 aa14.53□□□□□ -0.08
NUP50-203ENST00000407019 LINC00696Q6ZRV3 163 aa14.53□□□□□ -0.08
NUP50-203ENST00000407019 TMEM200AQ86VY9 491 aa14.53□□□□□ -0.08
NUP50-203ENST00000407019 TMEM251Q8N6I4 163 aa14.53□□□□□ -0.08
NUP50-203ENST00000407019 ADAMTS17Q8TE56 1095 aa14.53□□□□□ -0.08
NUP50-203ENST00000407019 GALNT14Q96FL9 552 aa14.53□□□□□ -0.08
NUP50-203ENST00000407019 REPIN1Q9BWE0 567 aaKnown RBP14.53□□□□□ -0.08
NUP50-203ENST00000407019 PRRG4Q9BZD6 226 aa14.53□□□□□ -0.08
NUP50-203ENST00000407019 STARD10Q9Y365 291 aa14.53□□□□□ -0.08
NUP50-203ENST00000407019 PQLC2LA1A4F0 135 aa14.52□□□□□ -0.09
NUP50-203ENST00000407019 NUDT19A8MXV4 375 aa14.52□□□□□ -0.09
NUP50-203ENST00000407019 K7EPK0 472 aa14.52□□□□□ -0.09
NUP50-203ENST00000407019 OR5AC1P0C628 307 aa14.52□□□□□ -0.09
NUP50-203ENST00000407019 FAM157CP0CG43 387 aa14.52□□□□□ -0.09
NUP50-203ENST00000407019 NPBWR2P48146 333 aa14.52□□□□□ -0.09
NUP50-203ENST00000407019 MRPL21Q7Z2W9 205 aaKnown RBP14.52□□□□□ -0.09
NUP50-203ENST00000407019 CNTRLQ7Z7A1 2325 aa14.52□□□□□ -0.09
NUP50-203ENST00000407019 FAM71E2Q8N5Q1 922 aa14.52□□□□□ -0.09
NUP50-203ENST00000407019 MOB3AQ96BX8 217 aa14.52□□□□□ -0.09
NUP50-203ENST00000407019 DOCK10Q96BY6 2186 aa14.52□□□□□ -0.09
NUP50-203ENST00000407019 SUCNR1Q9BXA5 334 aa14.52□□□□□ -0.09
NUP50-203ENST00000407019 C5orf49A4QMS7 147 aa14.51□□□□□ -0.09
NUP50-203ENST00000407019 ZNF724A8MTY0 619 aa14.51□□□□□ -0.09
NUP50-203ENST00000407019 RPL12P30050 165 aaKnown RBP14.51□□□□□ -0.09
NUP50-203ENST00000407019 FOXG1P55316 489 aaPredicted RBP14.51□□□□□ -0.09
NUP50-203ENST00000407019 PRDX4Q13162 271 aa14.51□□□□□ -0.09
NUP50-203ENST00000407019 SP6Q3SY56 376 aa14.51□□□□□ -0.09
NUP50-203ENST00000407019 SMUG1Q53HV7 270 aa14.51□□□□□ -0.09
NUP50-203ENST00000407019 APH1AQ96BI3 265 aa14.51□□□□□ -0.09
NUP50-203ENST00000407019 PRRX2Q99811 253 aa14.51□□□□□ -0.09
NUP50-203ENST00000407019 RNF122Q9H9V4 155 aa14.51□□□□□ -0.09
NUP50-203ENST00000407019 SLC2A9Q9NRM0 540 aa14.51□□□□□ -0.09
NUP50-203ENST00000407019 LSM5Q9Y4Y9 91 aaKnown RBP14.51□□□□□ -0.09
NUP50-203ENST00000407019 TMEM218A2RU14 115 aa14.51□□□□□ -0.09
NUP50-203ENST00000407019 FAM90A10PA6NDY2 464 aa14.51□□□□□ -0.09
NUP50-203ENST00000407019 FAM90A18PA6NE21 464 aa14.51□□□□□ -0.09
NUP50-203ENST00000407019 FAM90A16PA6NEW6 464 aa14.51□□□□□ -0.09
NUP50-203ENST00000407019 FAM90A20PA6NIJ5 464 aa14.51□□□□□ -0.09
NUP50-203ENST00000407019 FAM90A8PA6NJQ4 464 aa14.51□□□□□ -0.09
NUP50-203ENST00000407019 FAM90A7PA6NKC0 464 aa14.51□□□□□ -0.09
NUP50-203ENST00000407019 ZNF705EA8MWA4 302 aaPredicted RBP14.51□□□□□ -0.09
NUP50-203ENST00000407019 FAM90A22PA8MWA6 464 aa14.51□□□□□ -0.09
NUP50-203ENST00000407019 FAM90A12PA8MX19 464 aa14.51□□□□□ -0.09
NUP50-203ENST00000407019 FAM90A5PA8MXJ8 464 aa14.51□□□□□ -0.09
NUP50-203ENST00000407019 FAM90A23PA8MXZ1 464 aa14.51□□□□□ -0.09
NUP50-203ENST00000407019 MT-CO3P00414 261 aa14.51□□□□□ -0.09
NUP50-203ENST00000407019 FAM90A15PP0C7V4 464 aa14.51□□□□□ -0.09
NUP50-203ENST00000407019 FAM90A13PP0C7W8 464 aa14.51□□□□□ -0.09
NUP50-203ENST00000407019 FAM90A14PP0C7W9 464 aa14.51□□□□□ -0.09
NUP50-203ENST00000407019 FAM90A24PP0C7X0 464 aa14.51□□□□□ -0.09
NUP50-203ENST00000407019 CCL2P13500 99 aa14.51□□□□□ -0.09
NUP50-203ENST00000407019 UCP3P55916 312 aa14.51□□□□□ -0.09
NUP50-203ENST00000407019 HERV-K104P61576 105 aa14.51□□□□□ -0.09
NUP50-203ENST00000407019 SPEM2Q0P670 501 aa14.51□□□□□ -0.09
NUP50-203ENST00000407019 DAZAP2Q15038 168 aaPredicted RBP14.51□□□□□ -0.09
NUP50-203ENST00000407019 PHLDA2Q53GA4 152 aa14.51□□□□□ -0.09
NUP50-203ENST00000407019 RPL7L1Q6DKI1 246 aaKnown RBP14.51□□□□□ -0.09
NUP50-203ENST00000407019 EIF5AL1Q6IS14 154 aaKnown RBP14.51□□□□□ -0.09
NUP50-203ENST00000407019 Q6ZPA2 131 aa14.51□□□□□ -0.09
NUP50-203ENST00000407019 BATF2Q8N1L9 274 aa14.51□□□□□ -0.09
NUP50-203ENST00000407019 Q8NFD4 153 aa14.51□□□□□ -0.09
NUP50-203ENST00000407019 APOBEC3DQ96AK3 386 aaPredicted RBP14.51□□□□□ -0.09
NUP50-203ENST00000407019 MMP26Q9NRE1 261 aa14.51□□□□□ -0.09
NUP50-203ENST00000407019 LPAR3Q9UBY5 353 aa14.51□□□□□ -0.09
NUP50-203ENST00000407019 KMT2EQ8IZD2 1858 aa14.5□□□□□ -0.09
NUP50-203ENST00000407019 SCGB1D2O95969 90 aa14.5□□□□□ -0.09
NUP50-203ENST00000407019 OR2A2Q6IF42 318 aa14.5□□□□□ -0.09
NUP50-203ENST00000407019 ZDHHC23Q8IYP9 409 aa14.5□□□□□ -0.09
NUP50-203ENST00000407019 LRTM2Q8N967 370 aa14.5□□□□□ -0.09
NUP50-203ENST00000407019 LOXL4Q96JB6 756 aa14.5□□□□□ -0.09
NUP50-203ENST00000407019 SYT3Q9BQG1 590 aa14.5□□□□□ -0.09
NUP50-203ENST00000407019 TAF9BQ9HBM6 251 aa14.5□□□□□ -0.09
NUP50-203ENST00000407019 ZNF503-AS2A6NEH8 195 aa14.5□□□□□ -0.09
NUP50-203ENST00000407019 M0R296 226 aa14.5□□□□□ -0.09
NUP50-203ENST00000407019 NUPL2O15504 423 aaKnown RBP14.5□□□□□ -0.09
NUP50-203ENST00000407019 ACTL6AO96019 429 aa14.5□□□□□ -0.09
NUP50-203ENST00000407019 BCL3P20749 454 aa14.5□□□□□ -0.09
NUP50-203ENST00000407019 LIAT1Q6ZQX7 453 aa14.5□□□□□ -0.09
NUP50-203ENST00000407019 SAXO1Q8IYX7 474 aa14.5□□□□□ -0.09
NUP50-203ENST00000407019 CCDC71LQ8N9Z2 235 aa14.5□□□□□ -0.09
NUP50-203ENST00000407019 OR5L1Q8NGL2 311 aa14.5□□□□□ -0.09
NUP50-203ENST00000407019 HPSE2Q8WWQ2 592 aa14.5□□□□□ -0.09
NUP50-203ENST00000407019 EXTL1Q92935 676 aa14.5□□□□□ -0.09
NUP50-203ENST00000407019 SLAMF9Q96A28 289 aa14.5□□□□□ -0.09
NUP50-203ENST00000407019 SAT2Q96F10 170 aaPredicted RBP14.5□□□□□ -0.09
NUP50-203ENST00000407019 NKX6-2Q9C056 277 aaPredicted RBP14.5□□□□□ -0.09
NUP50-203ENST00000407019 FGF23Q9GZV9 251 aaPredicted RBP14.5□□□□□ -0.09
NUP50-203ENST00000407019 KLF13Q9Y2Y9 288 aaPredicted RBP14.5□□□□□ -0.09
NUP50-203ENST00000407019 ZDBF2Q9HCK1 2354 aa14.49□□□□□ -0.09
NUP50-203ENST00000407019 COL6A3P12111 3177 aa14.49□□□□□ -0.09
NUP50-203ENST00000407019 ZNHIT1O43257 154 aa14.49□□□□□ -0.09
NUP50-203ENST00000407019 ATG12O94817 140 aa14.49□□□□□ -0.09
NUP50-203ENST00000407019 CST4P01036 141 aa14.49□□□□□ -0.09
NUP50-203ENST00000407019 AADACP22760 399 aa14.49□□□□□ -0.09
NUP50-203ENST00000407019 ARR3P36575 388 aa14.49□□□□□ -0.09
NUP50-203ENST00000407019 HAAOP46952 286 aa14.49□□□□□ -0.09
NUP50-203ENST00000407019 ARHGDIBP52566 201 aa14.49□□□□□ -0.09
NUP50-203ENST00000407019 AKR1C2P52895 323 aa14.49□□□□□ -0.09
NUP50-203ENST00000407019 AKR1C1Q04828 323 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 88.6 ms