RNA–Protein interactions for RNA: ENST00000395794.2

CXCL12-205, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 1,052 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-205ENST00000395794 TRBV2A0A0J9YWF9 115 aa11.2□□□□□ -0.62
CXCL12-205ENST00000395794 TMEM212A6NML5 194 aa11.2□□□□□ -0.62
CXCL12-205ENST00000395794 OR4C45A6NMZ5 311 aa11.2□□□□□ -0.62
CXCL12-205ENST00000395794 SH2D1BO14796 132 aa11.2□□□□□ -0.62
CXCL12-205ENST00000395794 ZNF737O75373 536 aa11.2□□□□□ -0.62
CXCL12-205ENST00000395794 RBP4P02753 201 aa11.2□□□□□ -0.62
CXCL12-205ENST00000395794 HCKP08631 526 aa11.2□□□□□ -0.62
CXCL12-205ENST00000395794 ZNF728P0DKX0 622 aa11.2□□□□□ -0.62
CXCL12-205ENST00000395794 PRKACAP17612 351 aa11.2□□□□□ -0.62
CXCL12-205ENST00000395794 BCL3P20749 454 aa11.2□□□□□ -0.62
CXCL12-205ENST00000395794 ZNF273Q14593 569 aa11.2□□□□□ -0.62
CXCL12-205ENST00000395794 GRK1Q15835 563 aa11.2□□□□□ -0.62
CXCL12-205ENST00000395794 ZSCAN26Q16670 478 aa11.2□□□□□ -0.62
CXCL12-205ENST00000395794 LRRC75BQ2VPJ9 315 aa11.2□□□□□ -0.62
CXCL12-205ENST00000395794 ZNF782Q6ZMW2 699 aaPredicted RBP11.2□□□□□ -0.62
CXCL12-205ENST00000395794 SERPINA12Q8IW75 414 aa11.2□□□□□ -0.62
CXCL12-205ENST00000395794 OR5D14Q8NGL3 314 aa11.2□□□□□ -0.62
CXCL12-205ENST00000395794 OR13C9Q8NGT0 318 aa11.2□□□□□ -0.62
CXCL12-205ENST00000395794 OR5AK2Q8NH90 309 aa11.2□□□□□ -0.62
CXCL12-205ENST00000395794 LINC01006Q8NI28 216 aa11.2□□□□□ -0.62
CXCL12-205ENST00000395794 ZNF714Q96N38 554 aa11.2□□□□□ -0.62
CXCL12-205ENST00000395794 PPA2Q9H2U2 334 aa11.2□□□□□ -0.62
CXCL12-205ENST00000395794 ZCCHC4Q9H5U6 513 aa11.2□□□□□ -0.62
CXCL12-205ENST00000395794 ISG20L2Q9H9L3 353 aaKnown RBP11.2□□□□□ -0.62
CXCL12-205ENST00000395794 SEBOXQ9HB31 216 aaPredicted RBP11.2□□□□□ -0.62
CXCL12-205ENST00000395794 RAB18Q9NP72 206 aa11.2□□□□□ -0.62
CXCL12-205ENST00000395794 RBFOX1Q9NWB1 397 aaKnown RBP11.2□□□□□ -0.62
CXCL12-205ENST00000395794 SMPD3Q9NY59 655 aaPredicted RBP11.2□□□□□ -0.62
CXCL12-205ENST00000395794 DHDHQ9UQ10 334 aa11.2□□□□□ -0.62
CXCL12-205ENST00000395794 MYRFQ9Y2G1 1151 aa11.2□□□□□ -0.62
CXCL12-205ENST00000395794 IRGMA1A4Y4 181 aa11.19□□□□□ -0.62
CXCL12-205ENST00000395794 FUOMA2VDF0 154 aa11.19□□□□□ -0.62
CXCL12-205ENST00000395794 C17orf98A8MV24 154 aa11.19□□□□□ -0.62
CXCL12-205ENST00000395794 TIMM23O14925 209 aa11.19□□□□□ -0.62
CXCL12-205ENST00000395794 MAGEB3O15480 346 aa11.19□□□□□ -0.62
CXCL12-205ENST00000395794 IGHA1P01876 353 aa11.19□□□□□ -0.62
CXCL12-205ENST00000395794 MT-ND2P03891 347 aa11.19□□□□□ -0.62
CXCL12-205ENST00000395794 DUSP1P28562 367 aa11.19□□□□□ -0.62
CXCL12-205ENST00000395794 NPBWR2P48146 333 aa11.19□□□□□ -0.62
CXCL12-205ENST00000395794 SNU13P55769 128 aaKnown RBP11.19□□□□□ -0.62
CXCL12-205ENST00000395794 AANATQ16613 207 aa11.19□□□□□ -0.62
CXCL12-205ENST00000395794 LPCAT4Q643R3 524 aa11.19□□□□□ -0.62
CXCL12-205ENST00000395794 TREML4Q6UXN2 200 aa11.19□□□□□ -0.62
CXCL12-205ENST00000395794 TRAPPC6BQ86SZ2 158 aa11.19□□□□□ -0.62
CXCL12-205ENST00000395794 C11orf42Q8N5U0 333 aa11.19□□□□□ -0.62
CXCL12-205ENST00000395794 DTX3Q8N9I9 347 aa11.19□□□□□ -0.62
CXCL12-205ENST00000395794 OR51A4Q8NGJ6 313 aa11.19□□□□□ -0.62
CXCL12-205ENST00000395794 OR52I1Q8NGK6 324 aa11.19□□□□□ -0.62
CXCL12-205ENST00000395794 OR10AC1Q8NH08 325 aa11.19□□□□□ -0.62
CXCL12-205ENST00000395794 TSEN15Q8WW01 171 aaKnown RBP11.19□□□□□ -0.62
CXCL12-205ENST00000395794 RFT1Q96AA3 541 aa11.19□□□□□ -0.62
CXCL12-205ENST00000395794 CPNE2Q96FN4 548 aaPredicted RBP11.19□□□□□ -0.62
CXCL12-205ENST00000395794 MEGF9Q9H1U4 602 aa11.19□□□□□ -0.62
CXCL12-205ENST00000395794 C16orf95Q9H693 158 aa11.19□□□□□ -0.62
CXCL12-205ENST00000395794 RHOFQ9HBH0 211 aa11.19□□□□□ -0.62
CXCL12-205ENST00000395794 EXOSC4Q9NPD3 245 aaKnown RBP11.19□□□□□ -0.62
CXCL12-205ENST00000395794 TMEM82A0PJX8 343 aa11.18□□□□□ -0.62
CXCL12-205ENST00000395794 M0QZ24 198 aa11.18□□□□□ -0.62
CXCL12-205ENST00000395794 MGST3O14880 152 aa11.18□□□□□ -0.62
CXCL12-205ENST00000395794 ZFPL1O95159 310 aa11.18□□□□□ -0.62
CXCL12-205ENST00000395794 ARG1P05089 322 aa11.18□□□□□ -0.62
CXCL12-205ENST00000395794 TMEM225BP0DP42 221 aa11.18□□□□□ -0.62
CXCL12-205ENST00000395794 CALCBP10092 127 aa11.18□□□□□ -0.62
CXCL12-205ENST00000395794 BMXP51813 675 aa11.18□□□□□ -0.62
CXCL12-205ENST00000395794 SCN1BQ07699 218 aa11.18□□□□□ -0.62
CXCL12-205ENST00000395794 DYNC1I2Q13409 638 aaKnown RBP11.18□□□□□ -0.62
CXCL12-205ENST00000395794 ZNF146Q15072 292 aa11.18□□□□□ -0.62
CXCL12-205ENST00000395794 LY6EQ16553 131 aa11.18□□□□□ -0.62
CXCL12-205ENST00000395794 TMPRSS11AQ6ZMR5 421 aa11.18□□□□□ -0.62
CXCL12-205ENST00000395794 Q6ZSV7 163 aa11.18□□□□□ -0.62
CXCL12-205ENST00000395794 SAXO1Q8IYX7 474 aa11.18□□□□□ -0.62
CXCL12-205ENST00000395794 OR5D18Q8NGL1 313 aa11.18□□□□□ -0.62
CXCL12-205ENST00000395794 OR4C13Q8NGP0 309 aa11.18□□□□□ -0.62
CXCL12-205ENST00000395794 C17orf50Q8WW18 174 aa11.18□□□□□ -0.62
CXCL12-205ENST00000395794 FOXRED1Q96CU9 486 aaPredicted RBP11.18□□□□□ -0.62
CXCL12-205ENST00000395794 CITED1Q99966 193 aa11.18□□□□□ -0.62
CXCL12-205ENST00000395794 CHST6Q9GZX3 395 aa11.18□□□□□ -0.62
CXCL12-205ENST00000395794 TCF7L1Q9HCS4 588 aa11.18□□□□□ -0.62
CXCL12-205ENST00000395794 HMG20AQ9NP66 347 aa11.18□□□□□ -0.62
CXCL12-205ENST00000395794 C8orf4Q9NR00 106 aa11.18□□□□□ -0.62
CXCL12-205ENST00000395794 ABCB10Q9NRK6 738 aa11.18□□□□□ -0.62
CXCL12-205ENST00000395794 MRPS18AQ9NVS2 196 aaKnown RBP11.18□□□□□ -0.62
CXCL12-205ENST00000395794 GSTK1Q9Y2Q3 226 aa11.18□□□□□ -0.62
CXCL12-205ENST00000395794 LINC00312Q9Y6C7 94 aa11.18□□□□□ -0.62
CXCL12-205ENST00000395794 MEX3AA1L020 520 aaKnown RBP11.17□□□□□ -0.62
CXCL12-205ENST00000395794 H3BUI4 141 aa11.17□□□□□ -0.62
CXCL12-205ENST00000395794 SIRPB1O00241 398 aa11.17□□□□□ -0.62
CXCL12-205ENST00000395794 SULT1B1O43704 296 aa11.17□□□□□ -0.62
CXCL12-205ENST00000395794 TSPAN9O75954 239 aa11.17□□□□□ -0.62
CXCL12-205ENST00000395794 CLPXO76031 633 aa11.17□□□□□ -0.62
CXCL12-205ENST00000395794 KDM4BO94953 1096 aa11.17□□□□□ -0.62
CXCL12-205ENST00000395794 IGHV1-8P0DP01 117 aa11.17□□□□□ -0.62
CXCL12-205ENST00000395794 MYL12AP19105 171 aa11.17□□□□□ -0.62
CXCL12-205ENST00000395794 GABRA5P31644 462 aa11.17□□□□□ -0.62
CXCL12-205ENST00000395794 DLX6P56179 175 aa11.17□□□□□ -0.62
CXCL12-205ENST00000395794 PROK1P58294 105 aa11.17□□□□□ -0.62
CXCL12-205ENST00000395794 SRSF4Q08170 494 aaKnown RBP11.17□□□□□ -0.62
CXCL12-205ENST00000395794 MED21Q13503 144 aa11.17□□□□□ -0.62
CXCL12-205ENST00000395794 TTC23Q5W5X9 447 aa11.17□□□□□ -0.62
CXCL12-205ENST00000395794 SLC35E4Q6ICL7 350 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 126 ms