RNA–Protein interactions for RNA: ENST00000395066.7

CLK3-202, Transcript of CDC like kinase 3, humanhuman

TSL 1 (best) BASIC

Gene CLK3, Length 2,621 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-202ENST00000395066 A0A1W2PRV1 198 aa17.9■□□□□ 0.46
CLK3-202ENST00000395066 MBPP02686 304 aaPredicted RBP17.9■□□□□ 0.46
CLK3-202ENST00000395066 DANCRP0C864 163 aa17.9■□□□□ 0.46
CLK3-202ENST00000395066 IGSF11Q5DX21 431 aa17.9■□□□□ 0.46
CLK3-202ENST00000395066 FGFBP3Q8TAT2 258 aa17.9■□□□□ 0.46
CLK3-202ENST00000395066 METTL9Q9H1A3 318 aa17.9■□□□□ 0.46
CLK3-202ENST00000395066 ARV1Q9H2C2 271 aa17.9■□□□□ 0.46
CLK3-202ENST00000395066 OR51M1Q9H341 326 aa17.9■□□□□ 0.46
CLK3-202ENST00000395066 HS3ST3B1Q9Y662 390 aa17.9■□□□□ 0.46
CLK3-202ENST00000395066 C1QL1O75973 258 aa17.9■□□□□ 0.46
CLK3-202ENST00000395066 IGHV2-5P01817 119 aa17.9■□□□□ 0.46
CLK3-202ENST00000395066 ASCL1P50553 236 aa17.9■□□□□ 0.46
CLK3-202ENST00000395066 UCP2P55851 309 aa17.9■□□□□ 0.46
CLK3-202ENST00000395066 FOXL2NBQ6ZUU3 175 aa17.9■□□□□ 0.46
CLK3-202ENST00000395066 TRIOBPQ9H2D6 2365 aa17.9■□□□□ 0.46
CLK3-202ENST00000395066 A0A1B0GV50 99 aa17.89■□□□□ 0.46
CLK3-202ENST00000395066 CRYGSP22914 178 aa17.89■□□□□ 0.46
CLK3-202ENST00000395066 DSCR4P56555 118 aaPredicted RBP17.89■□□□□ 0.46
CLK3-202ENST00000395066 HLA-BQ31612 363 aa17.89■□□□□ 0.46
CLK3-202ENST00000395066 SLC22A25Q6T423 547 aa17.89■□□□□ 0.46
CLK3-202ENST00000395066 PLXDC2Q6UX71 529 aa17.89■□□□□ 0.46
CLK3-202ENST00000395066 ANGPTL4Q9BY76 406 aa17.89■□□□□ 0.46
CLK3-202ENST00000395066 LUZP4Q9P127 313 aa17.89■□□□□ 0.46
CLK3-202ENST00000395066 MIOXQ9UGB7 285 aa17.89■□□□□ 0.46
CLK3-202ENST00000395066 NCKAP5O14513 1909 aa17.89■□□□□ 0.45
CLK3-202ENST00000395066 SEC11BP0C7V7 166 aa17.89■□□□□ 0.45
CLK3-202ENST00000395066 NR2C1P13056 603 aa17.89■□□□□ 0.45
CLK3-202ENST00000395066 CAMLGP49069 296 aa17.89■□□□□ 0.45
CLK3-202ENST00000395066 Q6ZPA2 131 aa17.89■□□□□ 0.45
CLK3-202ENST00000395066 OR10AD1Q8NGE0 317 aa17.89■□□□□ 0.45
CLK3-202ENST00000395066 RTN4IP1Q8WWV3 396 aaPredicted RBP17.89■□□□□ 0.45
CLK3-202ENST00000395066 IMMP1LQ96LU5 166 aa17.89■□□□□ 0.45
CLK3-202ENST00000395066 RSRP1Q9BUV0 290 aa17.89■□□□□ 0.45
CLK3-202ENST00000395066 DUSP23Q9BVJ7 150 aa17.89■□□□□ 0.45
CLK3-202ENST00000395066 WFDC1Q9HC57 220 aa17.89■□□□□ 0.45
CLK3-202ENST00000395066 F10P00742 488 aa17.88■□□□□ 0.45
CLK3-202ENST00000395066 OR8U8P0C7N1 319 aa17.88■□□□□ 0.45
CLK3-202ENST00000395066 ZNF728P0DKX0 622 aa17.88■□□□□ 0.45
CLK3-202ENST00000395066 NQO2P16083 231 aa17.88■□□□□ 0.45
CLK3-202ENST00000395066 ZNF32P17041 273 aa17.88■□□□□ 0.45
CLK3-202ENST00000395066 ZNF133P52736 654 aaPredicted RBP17.88■□□□□ 0.45
CLK3-202ENST00000395066 FBXL14Q8N1E6 418 aa17.88■□□□□ 0.45
CLK3-202ENST00000395066 FAM24BQ8N5W8 94 aa17.88■□□□□ 0.45
CLK3-202ENST00000395066 OR52M1Q8NGK5 317 aa17.88■□□□□ 0.45
CLK3-202ENST00000395066 KIAA1549Q9HCM3 1950 aa17.88■□□□□ 0.45
CLK3-202ENST00000395066 BORCS7-ASMTA0A0B4J1R7 106 aa17.88■□□□□ 0.45
CLK3-202ENST00000395066 UMAD1C9J7I0 102 aa17.88■□□□□ 0.45
CLK3-202ENST00000395066 E5RGE8 158 aa17.88■□□□□ 0.45
CLK3-202ENST00000395066 RRP8O43159 456 aaKnown RBP17.88■□□□□ 0.45
CLK3-202ENST00000395066 TXNL1O43396 289 aa17.88■□□□□ 0.45
CLK3-202ENST00000395066 SYNGR3O43761 229 aa17.88■□□□□ 0.45
CLK3-202ENST00000395066 KLF7O75840 302 aaPredicted RBP17.88■□□□□ 0.45
CLK3-202ENST00000395066 IGHV3-9P01782 118 aa17.88■□□□□ 0.45
CLK3-202ENST00000395066 SSR4P51571 173 aa17.88■□□□□ 0.45
CLK3-202ENST00000395066 ABCA11PQ4W5N1 156 aa17.88■□□□□ 0.45
CLK3-202ENST00000395066 FAM27BQ5VT28 67 aa17.88■□□□□ 0.45
CLK3-202ENST00000395066 LYSMD4Q5XG99 296 aa17.88■□□□□ 0.45
CLK3-202ENST00000395066 NSG2Q9Y328 171 aa17.88■□□□□ 0.45
CLK3-202ENST00000395066 S100PP25815 95 aa17.87■□□□□ 0.45
CLK3-202ENST00000395066 SULT1A1P50225 295 aa17.87■□□□□ 0.45
CLK3-202ENST00000395066 ARL6IP1Q15041 203 aa17.87■□□□□ 0.45
CLK3-202ENST00000395066 ADAM5Q6NVV9 412 aa17.87■□□□□ 0.45
CLK3-202ENST00000395066 IFI44Q8TCB0 444 aa17.87■□□□□ 0.45
CLK3-202ENST00000395066 TCTEX1D2Q8WW35 142 aa17.87■□□□□ 0.45
CLK3-202ENST00000395066 BORCS8Q96FH0 119 aa17.87■□□□□ 0.45
CLK3-202ENST00000395066 SH3BGRL3Q9H299 93 aa17.87■□□□□ 0.45
CLK3-202ENST00000395066 A0A087WZY1 265 aa17.87■□□□□ 0.45
CLK3-202ENST00000395066 ONECUT2O95948 504 aa17.87■□□□□ 0.45
CLK3-202ENST00000395066 ARG1P05089 322 aa17.87■□□□□ 0.45
CLK3-202ENST00000395066 CHATP28329 748 aa17.87■□□□□ 0.45
CLK3-202ENST00000395066 HTR5AP47898 357 aa17.87■□□□□ 0.45
CLK3-202ENST00000395066 TMEM187Q14656 261 aa17.87■□□□□ 0.45
CLK3-202ENST00000395066 C19orf12Q9NSK7 152 aa17.87■□□□□ 0.45
CLK3-202ENST00000395066 NECAP2Q9NVZ3 263 aa17.87■□□□□ 0.45
CLK3-202ENST00000395066 RFNGQ9Y644 331 aa17.87■□□□□ 0.45
CLK3-202ENST00000395066 LOC102723996A0A087X1L8 192 aa17.86■□□□□ 0.45
CLK3-202ENST00000395066 CA11O75493 328 aa17.86■□□□□ 0.45
CLK3-202ENST00000395066 CLN5O75503 358 aa17.86■□□□□ 0.45
CLK3-202ENST00000395066 OR2B8PP59922 312 aa17.86■□□□□ 0.45
CLK3-202ENST00000395066 MRPS34P82930 218 aaKnown RBP17.86■□□□□ 0.45
CLK3-202ENST00000395066 PPA1Q15181 289 aa17.86■□□□□ 0.45
CLK3-202ENST00000395066 RHEBQ15382 184 aa17.86■□□□□ 0.45
CLK3-202ENST00000395066 RTL6Q6ICC9 239 aa17.86■□□□□ 0.45
CLK3-202ENST00000395066 OR1F12Q8NHA8 337 aa17.86■□□□□ 0.45
CLK3-202ENST00000395066 GPHA2Q96T91 129 aa17.86■□□□□ 0.45
CLK3-202ENST00000395066 GINS3Q9BRX5 216 aa17.86■□□□□ 0.45
CLK3-202ENST00000395066 NAA60Q9H7X0 242 aa17.86■□□□□ 0.45
CLK3-202ENST00000395066 ZDHHC8Q9ULC8 765 aa17.86■□□□□ 0.45
CLK3-202ENST00000395066 VAMP5O95183 116 aa17.86■□□□□ 0.45
CLK3-202ENST00000395066 FKBP2P26885 142 aaKnown RBP17.86■□□□□ 0.45
CLK3-202ENST00000395066 RBP2P50120 134 aa17.86■□□□□ 0.45
CLK3-202ENST00000395066 EIF3IQ13347 325 aaKnown RBP17.86■□□□□ 0.45
CLK3-202ENST00000395066 RPS19BP1Q86WX3 136 aaKnown RBP17.86■□□□□ 0.45
CLK3-202ENST00000395066 OR1J1Q8NGS3 322 aa17.86■□□□□ 0.45
CLK3-202ENST00000395066 MALSU1Q96EH3 234 aa17.86■□□□□ 0.45
CLK3-202ENST00000395066 SLC2A9Q9NRM0 540 aa17.86■□□□□ 0.45
CLK3-202ENST00000395066 AP4M1O00189 453 aa17.85■□□□□ 0.45
CLK3-202ENST00000395066 RFPL3SP0C7P2 107 aa17.85■□□□□ 0.45
CLK3-202ENST00000395066 EIF2S3P41091 472 aaKnown RBP17.85■□□□□ 0.45
CLK3-202ENST00000395066 P2RY1P47900 373 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms