RNA–Protein interactions for RNA: ENST00000380075.6

TRIM54-202, Transcript of tripartite motif containing 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM54, Length 1,967 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54-202ENST00000380075 A0A1W2PPZ6 126 aa18.57■□□□□ 0.56
TRIM54-202ENST00000380075 PDCD6O75340 191 aa18.57■□□□□ 0.56
TRIM54-202ENST00000380075 SAXO1Q8IYX7 474 aa18.57■□□□□ 0.56
TRIM54-202ENST00000380075 OR10AD1Q8NGE0 317 aa18.57■□□□□ 0.56
TRIM54-202ENST00000380075 REG4Q9BYZ8 158 aa18.57■□□□□ 0.56
TRIM54-202ENST00000380075 ST3GAL6Q9Y274 331 aa18.57■□□□□ 0.56
TRIM54-202ENST00000380075 IGKV1D-8A0A087WSZ0 117 aa18.57■□□□□ 0.56
TRIM54-202ENST00000380075 GEMIN2O14893 280 aaKnown RBP18.57■□□□□ 0.56
TRIM54-202ENST00000380075 TPD52L2O43399 206 aaKnown RBP18.57■□□□□ 0.56
TRIM54-202ENST00000380075 SS18L1O75177 396 aaPredicted RBP18.57■□□□□ 0.56
TRIM54-202ENST00000380075 HLA-HP01893 362 aa18.57■□□□□ 0.56
TRIM54-202ENST00000380075 RLN2P04090 185 aa18.57■□□□□ 0.56
TRIM54-202ENST00000380075 OR5H8P0DN80 308 aa18.57■□□□□ 0.56
TRIM54-202ENST00000380075 PI3P19957 117 aa18.57■□□□□ 0.56
TRIM54-202ENST00000380075 PRSS12P56730 875 aa18.57■□□□□ 0.56
TRIM54-202ENST00000380075 RBM11P57052 281 aaKnown RBP18.57■□□□□ 0.56
TRIM54-202ENST00000380075 ANKRD55Q3KP44 614 aa18.57■□□□□ 0.56
TRIM54-202ENST00000380075 MRPL21Q7Z2W9 205 aaKnown RBP18.57■□□□□ 0.56
TRIM54-202ENST00000380075 TMEM178AQ8NBL3 297 aa18.57■□□□□ 0.56
TRIM54-202ENST00000380075 ARPC5LQ9BPX5 153 aa18.57■□□□□ 0.56
TRIM54-202ENST00000380075 SULT4A1Q9BR01 284 aa18.57■□□□□ 0.56
TRIM54-202ENST00000380075 HDHD3Q9BSH5 251 aaPredicted RBP18.57■□□□□ 0.56
TRIM54-202ENST00000380075 CSAG2Q9Y5P2 127 aa18.57■□□□□ 0.56
TRIM54-202ENST00000380075 ZNF850A8MQ14 1090 aa18.56■□□□□ 0.56
TRIM54-202ENST00000380075 CRYZL1O95825 349 aa18.56■□□□□ 0.56
TRIM54-202ENST00000380075 CST4P01036 141 aa18.56■□□□□ 0.56
TRIM54-202ENST00000380075 PET100P0DJ07 73 aa18.56■□□□□ 0.56
TRIM54-202ENST00000380075 LYL1P12980 280 aa18.56■□□□□ 0.56
TRIM54-202ENST00000380075 PLP2Q04941 152 aa18.56■□□□□ 0.56
TRIM54-202ENST00000380075 PCSK4Q6UW60 755 aa18.56■□□□□ 0.56
TRIM54-202ENST00000380075 DHRS11Q6UWP2 260 aa18.56■□□□□ 0.56
TRIM54-202ENST00000380075 OR56B2PQ8NGI1 322 aa18.56■□□□□ 0.56
TRIM54-202ENST00000380075 LRRC20Q8TCA0 184 aa18.56■□□□□ 0.56
TRIM54-202ENST00000380075 C2orf50Q96LR7 162 aa18.56■□□□□ 0.56
TRIM54-202ENST00000380075 ZNF71Q9NQZ8 489 aaPredicted RBP18.56■□□□□ 0.56
TRIM54-202ENST00000380075 C1orf123Q9NWV4 160 aa18.56■□□□□ 0.56
TRIM54-202ENST00000380075 RASL12Q9NYN1 266 aa18.56■□□□□ 0.56
TRIM54-202ENST00000380075 NUP50Q9UKX7 468 aa18.56■□□□□ 0.56
TRIM54-202ENST00000380075 TP53TG5Q9Y2B4 290 aa18.56■□□□□ 0.56
TRIM54-202ENST00000380075 MEMO1Q9Y316 297 aa18.56■□□□□ 0.56
TRIM54-202ENST00000380075 PQLC2LA1A4F0 135 aa18.55■□□□□ 0.56
TRIM54-202ENST00000380075 C5orf49A4QMS7 147 aa18.55■□□□□ 0.56
TRIM54-202ENST00000380075 IFNA2P01563 188 aa18.55■□□□□ 0.56
TRIM54-202ENST00000380075 SFTPBP07988 381 aa18.55■□□□□ 0.56
TRIM54-202ENST00000380075 RBMXP38159 391 aaKnown RBP18.55■□□□□ 0.56
TRIM54-202ENST00000380075 ATXN7L3Q14CW9 347 aaPredicted RBP18.55■□□□□ 0.56
TRIM54-202ENST00000380075 PIGYQ3MUY2 71 aa18.55■□□□□ 0.56
TRIM54-202ENST00000380075 C9orf135Q5VTT2 229 aa18.55■□□□□ 0.56
TRIM54-202ENST00000380075 IGFL2Q6UWQ7 119 aa18.55■□□□□ 0.56
TRIM54-202ENST00000380075 SGPP2Q8IWX5 399 aa18.55■□□□□ 0.56
TRIM54-202ENST00000380075 ZNF611Q8N823 705 aa18.55■□□□□ 0.56
TRIM54-202ENST00000380075 CXorf58Q96LI9 332 aa18.55■□□□□ 0.56
TRIM54-202ENST00000380075 CD79AP11912 226 aa18.55■□□□□ 0.56
TRIM54-202ENST00000380075 FUT3P21217 361 aa18.55■□□□□ 0.56
TRIM54-202ENST00000380075 TMEM211Q6ICI0 200 aa18.55■□□□□ 0.56
TRIM54-202ENST00000380075 PNPLA5Q7Z6Z6 429 aaPredicted RBP18.55■□□□□ 0.56
TRIM54-202ENST00000380075 PAPOLGQ9BWT3 736 aaKnown RBP18.55■□□□□ 0.56
TRIM54-202ENST00000380075 ZNF471Q9BX82 626 aaPredicted RBP18.55■□□□□ 0.56
TRIM54-202ENST00000380075 METTL8Q9H825 291 aaKnown RBP18.55■□□□□ 0.56
TRIM54-202ENST00000380075 ZNF286AQ9HBT8 521 aa18.55■□□□□ 0.56
TRIM54-202ENST00000380075 LHX6Q9UPM6 363 aa18.55■□□□□ 0.56
TRIM54-202ENST00000380075 TEX13DA0A0J9YY54 714 aaPredicted RBP18.54■□□□□ 0.56
TRIM54-202ENST00000380075 MSTNO14793 375 aa18.54■□□□□ 0.56
TRIM54-202ENST00000380075 LUMP51884 338 aaPredicted RBP18.54■□□□□ 0.56
TRIM54-202ENST00000380075 RAB1AP62820 205 aa18.54■□□□□ 0.56
TRIM54-202ENST00000380075 ARG2P78540 354 aa18.54■□□□□ 0.56
TRIM54-202ENST00000380075 LY6DQ14210 128 aa18.54■□□□□ 0.56
TRIM54-202ENST00000380075 ZNF766Q5HY98 468 aa18.54■□□□□ 0.56
TRIM54-202ENST00000380075 ELP2Q6IA86 826 aa18.54■□□□□ 0.56
TRIM54-202ENST00000380075 PRSS54Q6PEW0 395 aa18.54■□□□□ 0.56
TRIM54-202ENST00000380075 HSD17B13Q7Z5P4 300 aaPredicted RBP18.54■□□□□ 0.56
TRIM54-202ENST00000380075 EIF4E3Q8N5X7 224 aaKnown RBP18.54■□□□□ 0.56
TRIM54-202ENST00000380075 OR1S1Q8NH92 325 aa18.54■□□□□ 0.56
TRIM54-202ENST00000380075 DCUN1D4Q92564 292 aa18.54■□□□□ 0.56
TRIM54-202ENST00000380075 POM121L2Q96KW2 1035 aa18.54■□□□□ 0.56
TRIM54-202ENST00000380075 LDAHQ9H6V9 325 aa18.54■□□□□ 0.56
TRIM54-202ENST00000380075 TUBD1Q9UJT1 453 aa18.54■□□□□ 0.56
TRIM54-202ENST00000380075 SPENQ96T58 3664 aaKnown RBP18.54■□□□□ 0.56
TRIM54-202ENST00000380075 TRGV5A0A0B4J1U4 118 aa18.53■□□□□ 0.56
TRIM54-202ENST00000380075 ADAP1O75689 374 aa18.53■□□□□ 0.56
TRIM54-202ENST00000380075 ZP3P21754 424 aa18.53■□□□□ 0.56
TRIM54-202ENST00000380075 CCNOP22674 350 aa18.53■□□□□ 0.56
TRIM54-202ENST00000380075 NUP62P37198 522 aaPredicted RBP18.53■□□□□ 0.56
TRIM54-202ENST00000380075 PRDX4Q13162 271 aa18.53■□□□□ 0.56
TRIM54-202ENST00000380075 CEACAM21Q3KPI0 293 aa18.53■□□□□ 0.56
TRIM54-202ENST00000380075 MYO7BQ6PIF6 2116 aa18.53■□□□□ 0.56
TRIM54-202ENST00000380075 NUFIP2Q7Z417 695 aaKnown RBP18.53■□□□□ 0.56
TRIM54-202ENST00000380075 TMEM200AQ86VY9 491 aa18.53■□□□□ 0.56
TRIM54-202ENST00000380075 ZDHHC23Q8IYP9 409 aa18.53■□□□□ 0.56
TRIM54-202ENST00000380075 NANOS1Q8WY41 292 aaKnown RBP18.53■□□□□ 0.56
TRIM54-202ENST00000380075 RNF126Q9BV68 326 aa18.53■□□□□ 0.56
TRIM54-202ENST00000380075 WDR13Q9H1Z4 485 aa18.53■□□□□ 0.56
TRIM54-202ENST00000380075 C12orf4Q9NQ89 552 aa18.53■□□□□ 0.56
TRIM54-202ENST00000380075 GPR160Q9UJ42 338 aa18.53■□□□□ 0.56
TRIM54-202ENST00000380075 ZNF175Q9Y473 711 aa18.53■□□□□ 0.56
TRIM54-202ENST00000380075 CRYM-AS1A6NIL9 109 aa18.53■□□□□ 0.56
TRIM54-202ENST00000380075 KNG1P01042 644 aa18.53■□□□□ 0.56
TRIM54-202ENST00000380075 ZNF250P15622 560 aa18.53■□□□□ 0.56
TRIM54-202ENST00000380075 M6PRP20645 277 aa18.53■□□□□ 0.56
TRIM54-202ENST00000380075 PTGER4P35408 488 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms