RNA–Protein interactions for RNA: ENST00000375604.6

MCF2L-203, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

APPRIS P3 TSL 2 BASIC

Gene MCF2L, Length 6,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-203ENST00000375604 SCN3AQ9NY46 2000 aa15.14■□□□□ 0.01
MCF2L-203ENST00000375604 TBC1D26Q86UD7 250 aa15.14■□□□□ 0.01
MCF2L-203ENST00000375604 TGIF2LYQ8IUE0 185 aa15.14■□□□□ 0.01
MCF2L-203ENST00000375604 HAND1O96004 215 aa15.14■□□□□ 0.01
MCF2L-203ENST00000375604 GSX2Q9BZM3 304 aa15.14■□□□□ 0.01
MCF2L-203ENST00000375604 RHOFQ9HBH0 211 aa15.14■□□□□ 0.01
MCF2L-203ENST00000375604 POLR2AP24928 1970 aaKnown RBP15.13■□□□□ 0.01
MCF2L-203ENST00000375604 KCNAB3O43448 404 aa15.13■□□□□ 0.01
MCF2L-203ENST00000375604 MBP02144 154 aa15.13■□□□□ 0.01
MCF2L-203ENST00000375604 PRRX1P54821 245 aa15.13■□□□□ 0.01
MCF2L-203ENST00000375604 ZNF260Q3ZCT1 412 aa15.13■□□□□ 0.01
MCF2L-203ENST00000375604 MYPOPQ86VE0 399 aaPredicted RBP15.13■□□□□ 0.01
MCF2L-203ENST00000375604 D2HGDHQ8N465 521 aa15.13■□□□□ 0.01
MCF2L-203ENST00000375604 WDR13Q9H1Z4 485 aa15.13■□□□□ 0.01
MCF2L-203ENST00000375604 ZPLD1Q8TCW7 415 aa15.13■□□□□ 0.01
MCF2L-203ENST00000375604 TMEM56Q96MV1 263 aa15.13■□□□□ 0.01
MCF2L-203ENST00000375604 COL4A5P29400 1685 aa15.13■□□□□ 0.01
MCF2L-203ENST00000375604 Q8IYB0 196 aa15.13■□□□□ 0.01
MCF2L-203ENST00000375604 OR8B3Q8NGG8 313 aa15.13■□□□□ 0.01
MCF2L-203ENST00000375604 C10orf90Q96M02 699 aa15.13■□□□□ 0.01
MCF2L-203ENST00000375604 OR8B2Q96RD0 313 aa15.13■□□□□ 0.01
MCF2L-203ENST00000375604 TMEM208Q9BTX3 173 aa15.13■□□□□ 0.01
MCF2L-203ENST00000375604 SAP30LQ9HAJ7 183 aa15.13■□□□□ 0.01
MCF2L-203ENST00000375604 NIT2Q9NQR4 276 aa15.13■□□□□ 0.01
MCF2L-203ENST00000375604 NKX2-8O15522 239 aa15.13■□□□□ 0.01
MCF2L-203ENST00000375604 B3GALNT1O75752 331 aa15.13■□□□□ 0.01
MCF2L-203ENST00000375604 IGHA1P01876 353 aa15.13■□□□□ 0.01
MCF2L-203ENST00000375604 IGHA2P01877 340 aa15.13■□□□□ 0.01
MCF2L-203ENST00000375604 GGNBP1Q5YKI7 109 aa15.13■□□□□ 0.01
MCF2L-203ENST00000375604 TTTY12Q9BZ98 90 aa15.13■□□□□ 0.01
MCF2L-203ENST00000375604 ACSM4P0C7M7 580 aa15.13■□□□□ 0.01
MCF2L-203ENST00000375604 COL13A1Q5TAT6 717 aaPredicted RBP15.13■□□□□ 0.01
MCF2L-203ENST00000375604 ZNF429Q86V71 674 aa15.13■□□□□ 0.01
MCF2L-203ENST00000375604 SLC25A40Q8TBP6 338 aa15.13■□□□□ 0.01
MCF2L-203ENST00000375604 PCGF1Q9BSM1 259 aa15.13■□□□□ 0.01
MCF2L-203ENST00000375604 ZDHHC11Q9H8X9 412 aa15.13■□□□□ 0.01
MCF2L-203ENST00000375604 LOC102723971A0A1B0GUV8 181 aa15.12■□□□□ 0.01
MCF2L-203ENST00000375604 TO15178 435 aa15.12■□□□□ 0.01
MCF2L-203ENST00000375604 INPP5JQ15735 1006 aaPredicted RBP15.12■□□□□ 0.01
MCF2L-203ENST00000375604 LIPGQ9Y5X9 500 aa15.12■□□□□ 0.01
MCF2L-203ENST00000375604 A0A1W2PNV4 684 aa15.12■□□□□ 0.01
MCF2L-203ENST00000375604 SNRPGP15A8MWD9 76 aa15.12■□□□□ 0.01
MCF2L-203ENST00000375604 ACTL6AO96019 429 aa15.12■□□□□ 0.01
MCF2L-203ENST00000375604 WDR34Q96EX3 536 aa15.12■□□□□ 0.01
MCF2L-203ENST00000375604 COMMD1Q8N668 190 aa15.12■□□□□ 0.01
MCF2L-203ENST00000375604 TRIP12Q14669 1992 aaPredicted RBP15.12■□□□□ 0.01
MCF2L-203ENST00000375604 XKRY2A2RUG3 117 aa15.12■□□□□ 0.01
MCF2L-203ENST00000375604 RAB19A4D1S5 217 aa15.12■□□□□ 0.01
MCF2L-203ENST00000375604 LIMS3P0CW19 117 aa15.12■□□□□ 0.01
MCF2L-203ENST00000375604 LIMS4P0CW20 117 aa15.12■□□□□ 0.01
MCF2L-203ENST00000375604 DYNLT3P51808 116 aa15.12■□□□□ 0.01
MCF2L-203ENST00000375604 ZNF425Q6IV72 752 aa15.12■□□□□ 0.01
MCF2L-203ENST00000375604 IGKV1D-16P01601 117 aa15.12■□□□□ 0.01
MCF2L-203ENST00000375604 AESQ08117 197 aa15.12■□□□□ 0.01
MCF2L-203ENST00000375604 AANATQ16613 207 aa15.12■□□□□ 0.01
MCF2L-203ENST00000375604 OR1K1Q8NGR3 316 aa15.12■□□□□ 0.01
MCF2L-203ENST00000375604 BCL2L2Q92843 193 aaPredicted RBP15.12■□□□□ 0.01
MCF2L-203ENST00000375604 ADAP1O75689 374 aa15.11■□□□□ 0.01
MCF2L-203ENST00000375604 SFT2D2O95562 160 aa15.11■□□□□ 0.01
MCF2L-203ENST00000375604 RNASEKQ6P5S7 137 aaKnown RBP15.11■□□□□ 0.01
MCF2L-203ENST00000375604 HDHD3Q9BSH5 251 aaPredicted RBP15.11■□□□□ 0.01
MCF2L-203ENST00000375604 KIAA0100Q14667 2235 aaKnown RBP15.11■□□□□ 0.01
MCF2L-203ENST00000375604 C5orf67F2Z3F1 127 aa15.11■□□□□ 0.01
MCF2L-203ENST00000375604 MGAT2Q10469 447 aa15.11■□□□□ 0.01
MCF2L-203ENST00000375604 ENDOGQ14249 297 aaKnown RBP15.11■□□□□ 0.01
MCF2L-203ENST00000375604 GAB4Q2WGN9 574 aa15.11■□□□□ 0.01
MCF2L-203ENST00000375604 ATG4DQ86TL0 474 aaPredicted RBP15.11■□□□□ 0.01
MCF2L-203ENST00000375604 MDP1Q86V88 176 aa15.11■□□□□ 0.01
MCF2L-203ENST00000375604 TPRX1Q8N7U7 411 aa15.11■□□□□ 0.01
MCF2L-203ENST00000375604 SHANK3Q9BYB0 1731 aa15.11■□□□□ 0.01
MCF2L-203ENST00000375604 Q1RN00 199 aa15.11■□□□□ 0.01
MCF2L-203ENST00000375604 OR4F17Q8NGA8 305 aa15.11■□□□□ 0.01
MCF2L-203ENST00000375604 GPR27Q9NS67 375 aa15.11■□□□□ 0.01
MCF2L-203ENST00000375604 UQCC1Q9NVA1 299 aa15.11■□□□□ 0.01
MCF2L-203ENST00000375604 SLC2A8Q9NY64 477 aa15.11■□□□□ 0.01
MCF2L-203ENST00000375604 LAMB2P55268 1798 aa15.11■□□□□ 0.01
MCF2L-203ENST00000375604 hADV38S2A0JD32 116 aa15.11■□□□□ 0.01
MCF2L-203ENST00000375604 ST8SIA5O15466 376 aa15.11■□□□□ 0.01
MCF2L-203ENST00000375604 PTTG1IPP53801 180 aa15.11■□□□□ 0.01
MCF2L-203ENST00000375604 SKP2Q13309 424 aa15.11■□□□□ 0.01
MCF2L-203ENST00000375604 JMJD6Q6NYC1 403 aaPredicted RBP15.11■□□□□ 0.01
MCF2L-203ENST00000375604 ZNF385AQ96PM9 386 aaKnown RBP15.11■□□□□ 0.01
MCF2L-203ENST00000375604 CTSBP07858 339 aa15.11■□□□□ 0.01
MCF2L-203ENST00000375604 DCAF10Q5QP82 559 aa15.11■□□□□ 0.01
MCF2L-203ENST00000375604 CCDC190Q86UF4 302 aa15.11■□□□□ 0.01
MCF2L-203ENST00000375604 OR6X1Q8NH79 312 aa15.11■□□□□ 0.01
MCF2L-203ENST00000375604 GPR35Q9HC97 309 aa15.11■□□□□ 0.01
MCF2L-203ENST00000375604 CYSLTR2Q9NS75 346 aa15.11■□□□□ 0.01
MCF2L-203ENST00000375604 F2RL2O00254 374 aa15.1■□□□□ 0.01
MCF2L-203ENST00000375604 OR4A8P0C604 315 aa15.1■□□□□ 0.01
MCF2L-203ENST00000375604 CPN1P15169 458 aa15.1■□□□□ 0.01
MCF2L-203ENST00000375604 G6PCP35575 357 aa15.1■□□□□ 0.01
MCF2L-203ENST00000375604 RAC3P60763 192 aa15.1■□□□□ 0.01
MCF2L-203ENST00000375604 POLR2GP62487 172 aaKnown RBP eCLIP15.1■□□□□ 0.01
MCF2L-203ENST00000375604 DHRS2Q13268 280 aa15.1■□□□□ 0.01
MCF2L-203ENST00000375604 SEZ6L2Q6UXD5 910 aa15.1■□□□□ 0.01
MCF2L-203ENST00000375604 OR2H1Q9GZK4 316 aa15.1■□□□□ 0.01
MCF2L-203ENST00000375604 GAR1Q9NY12 217 aaKnown RBP15.1■□□□□ 0.01
MCF2L-203ENST00000375604 NEU3Q9UQ49 428 aa15.1■□□□□ 0.01
MCF2L-203ENST00000375604 HRASP01112 189 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms