RNA–Protein interactions for RNA: ENST00000373010.5

USP49-202, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 5 BASIC

Gene USP49, Length 2,446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-202ENST00000373010 LYL1P12980 280 aa16.13■□□□□ 0.17
USP49-202ENST00000373010 SPINK2P20155 84 aa16.13■□□□□ 0.17
USP49-202ENST00000373010 FUT3P21217 361 aa16.13■□□□□ 0.17
USP49-202ENST00000373010 PIGPP57054 158 aa16.13■□□□□ 0.17
USP49-202ENST00000373010 PAN3Q58A45 887 aaKnown RBP16.13■□□□□ 0.17
USP49-202ENST00000373010 TMPRSS7Q7RTY8 843 aa16.13■□□□□ 0.17
USP49-202ENST00000373010 STPG2Q8N412 459 aa16.13■□□□□ 0.17
USP49-202ENST00000373010 POM121L2Q96KW2 1035 aa16.13■□□□□ 0.17
USP49-202ENST00000373010 PCDHB16Q9NRJ7 776 aa16.13■□□□□ 0.17
USP49-202ENST00000373010 CYTL1Q9NRR1 136 aa16.13■□□□□ 0.17
USP49-202ENST00000373010 FCGR2CP31995 323 aa16.12■□□□□ 0.17
USP49-202ENST00000373010 HAAOP46952 286 aa16.12■□□□□ 0.17
USP49-202ENST00000373010 SP6Q3SY56 376 aa16.12■□□□□ 0.17
USP49-202ENST00000373010 PLEKHN1Q494U1 663 aaPredicted RBP16.12■□□□□ 0.17
USP49-202ENST00000373010 HIKESHIQ53FT3 197 aa16.12■□□□□ 0.17
USP49-202ENST00000373010 ZNF286AQ9HBT8 521 aa16.12■□□□□ 0.17
USP49-202ENST00000373010 SPRR3Q9UBC9 169 aa16.12■□□□□ 0.17
USP49-202ENST00000373010 SHANK1Q9Y566 2161 aa16.12■□□□□ 0.17
USP49-202ENST00000373010 ACTL6AO96019 429 aa16.11■□□□□ 0.17
USP49-202ENST00000373010 ARG2P78540 354 aa16.11■□□□□ 0.17
USP49-202ENST00000373010 IAH1Q2TAA2 248 aaPredicted RBP16.11■□□□□ 0.17
USP49-202ENST00000373010 MRPL24Q96A35 216 aaKnown RBP16.11■□□□□ 0.17
USP49-202ENST00000373010 OR51B6Q9H340 312 aa16.11■□□□□ 0.17
USP49-202ENST00000373010 C12orf4Q9NQ89 552 aa16.11■□□□□ 0.17
USP49-202ENST00000373010 ARR3P36575 388 aa16.11■□□□□ 0.17
USP49-202ENST00000373010 ZDHHC23Q8IYP9 409 aa16.11■□□□□ 0.17
USP49-202ENST00000373010 EIF4E3Q8N5X7 224 aaKnown RBP16.11■□□□□ 0.17
USP49-202ENST00000373010 BOLLQ8N9W6 283 aaKnown RBP16.11■□□□□ 0.17
USP49-202ENST00000373010 WDYHV1Q96HA8 205 aa16.11■□□□□ 0.17
USP49-202ENST00000373010 IL36RNQ9UBH0 155 aa16.11■□□□□ 0.17
USP49-202ENST00000373010 KRBOX1C9JBD0 128 aa16.1■□□□□ 0.17
USP49-202ENST00000373010 SS18L1O75177 396 aaPredicted RBP16.1■□□□□ 0.17
USP49-202ENST00000373010 M6PRP20645 277 aa16.1■□□□□ 0.17
USP49-202ENST00000373010 PHLDA2Q53GA4 152 aa16.1■□□□□ 0.17
USP49-202ENST00000373010 ZNF766Q5HY98 468 aa16.1■□□□□ 0.17
USP49-202ENST00000373010 C5orf24Q7Z6I8 188 aa16.1■□□□□ 0.17
USP49-202ENST00000373010 TMEM200AQ86VY9 491 aa16.1■□□□□ 0.17
USP49-202ENST00000373010 STOML3Q8TAV4 291 aa16.1■□□□□ 0.17
USP49-202ENST00000373010 MS4A7Q9GZW8 240 aaPredicted RBP16.1■□□□□ 0.17
USP49-202ENST00000373010 ZNF552Q9H707 407 aaPredicted RBP16.1■□□□□ 0.17
USP49-202ENST00000373010 TNRC6AQ8NDV7 1962 aaKnown RBP16.1■□□□□ 0.17
USP49-202ENST00000373010 ZNF732B4DXR9 585 aa16.1■□□□□ 0.17
USP49-202ENST00000373010 PLP2Q04941 152 aa16.1■□□□□ 0.17
USP49-202ENST00000373010 CEACAM21Q3KPI0 293 aa16.1■□□□□ 0.17
USP49-202ENST00000373010 ABCA11PQ4W5N1 156 aa16.1■□□□□ 0.17
USP49-202ENST00000373010 GGNBP1Q5YKI7 109 aa16.1■□□□□ 0.17
USP49-202ENST00000373010 C17orf50Q8WW18 174 aa16.1■□□□□ 0.17
USP49-202ENST00000373010 TRGV5A0A0B4J1U4 118 aa16.09■□□□□ 0.17
USP49-202ENST00000373010 A0A1B0GW55 424 aa16.09■□□□□ 0.17
USP49-202ENST00000373010 LILRA1O75019 489 aa16.09■□□□□ 0.17
USP49-202ENST00000373010 IL18BPO95998 194 aa16.09■□□□□ 0.17
USP49-202ENST00000373010 DUX4L2P0CJ85 424 aa16.09■□□□□ 0.17
USP49-202ENST00000373010 DUX4L3P0CJ86 424 aa16.09■□□□□ 0.17
USP49-202ENST00000373010 DUX4L4P0CJ87 422 aa16.09■□□□□ 0.17
USP49-202ENST00000373010 DUX4L5P0CJ88 424 aa16.09■□□□□ 0.17
USP49-202ENST00000373010 DUX4L6P0CJ89 424 aa16.09■□□□□ 0.17
USP49-202ENST00000373010 DUX4L7P0CJ90 424 aa16.09■□□□□ 0.17
USP49-202ENST00000373010 GLI4P10075 376 aa16.09■□□□□ 0.17
USP49-202ENST00000373010 TPT1P13693 172 aaKnown RBP16.09■□□□□ 0.17
USP49-202ENST00000373010 PMP22Q01453 160 aa16.09■□□□□ 0.17
USP49-202ENST00000373010 EXTL1Q92935 676 aa16.09■□□□□ 0.17
USP49-202ENST00000373010 SHARPINQ9H0F6 387 aa16.09■□□□□ 0.17
USP49-202ENST00000373010 TAS2R3Q9NYW6 316 aa16.09■□□□□ 0.17
USP49-202ENST00000373010 DUX4Q9UBX2 424 aa16.09■□□□□ 0.17
USP49-202ENST00000373010 MEMO1Q9Y316 297 aa16.09■□□□□ 0.17
USP49-202ENST00000373010 B8ZZF3 427 aa16.09■□□□□ 0.17
USP49-202ENST00000373010 CST4P01036 141 aa16.09■□□□□ 0.17
USP49-202ENST00000373010 OR5AC1P0C628 307 aa16.09■□□□□ 0.17
USP49-202ENST00000373010 WNT5AP41221 380 aa16.09■□□□□ 0.17
USP49-202ENST00000373010 SRSF6Q13247 344 aaKnown RBP16.09■□□□□ 0.17
USP49-202ENST00000373010 TMEM211Q6ICI0 200 aa16.09■□□□□ 0.17
USP49-202ENST00000373010 ZNF585AQ6P3V2 769 aa16.09■□□□□ 0.17
USP49-202ENST00000373010 VASH2Q86V25 355 aa16.09■□□□□ 0.17
USP49-202ENST00000373010 BAP18Q8IXM2 172 aa16.09■□□□□ 0.17
USP49-202ENST00000373010 Q8NFD4 153 aa16.09■□□□□ 0.17
USP49-202ENST00000373010 RTN4IP1Q8WWV3 396 aaPredicted RBP16.09■□□□□ 0.17
USP49-202ENST00000373010 AQP10Q96PS8 301 aa16.09■□□□□ 0.17
USP49-202ENST00000373010 NAA60Q9H7X0 242 aa16.09■□□□□ 0.17
USP49-202ENST00000373010 MTCH1Q9NZJ7 389 aa16.09■□□□□ 0.17
USP49-202ENST00000373010 CD300LBA8K4G0 201 aa16.08■□□□□ 0.17
USP49-202ENST00000373010 HOXD4P09016 255 aaPredicted RBP16.08■□□□□ 0.17
USP49-202ENST00000373010 SLC38A6Q8IZM9 456 aa16.08■□□□□ 0.17
USP49-202ENST00000373010 OR1K1Q8NGR3 316 aa16.08■□□□□ 0.17
USP49-202ENST00000373010 OR11L1Q8NGX0 322 aa16.08■□□□□ 0.17
USP49-202ENST00000373010 MED12LQ86YW9 2145 aa16.08■□□□□ 0.16
USP49-202ENST00000373010 SIGLEC5O15389 551 aa16.08■□□□□ 0.16
USP49-202ENST00000373010 PET100P0DJ07 73 aa16.08■□□□□ 0.16
USP49-202ENST00000373010 AADACP22760 399 aa16.08■□□□□ 0.16
USP49-202ENST00000373010 TMEM187Q14656 261 aa16.08■□□□□ 0.16
USP49-202ENST00000373010 IGSF11Q5DX21 431 aa16.08■□□□□ 0.16
USP49-202ENST00000373010 SLC30A7Q8NEW0 376 aa16.08■□□□□ 0.16
USP49-202ENST00000373010 OR5L1Q8NGL2 311 aa16.08■□□□□ 0.16
USP49-202ENST00000373010 OR1S2Q8NGQ3 325 aa16.08■□□□□ 0.16
USP49-202ENST00000373010 TMED6Q8WW62 240 aa16.08■□□□□ 0.16
USP49-202ENST00000373010 CNTNAP3BQ96NU0 1288 aa16.08■□□□□ 0.16
USP49-202ENST00000373010 CNTNAP3Q9BZ76 1288 aa16.08■□□□□ 0.16
USP49-202ENST00000373010 OR2S2Q9NQN1 319 aa16.08■□□□□ 0.16
USP49-202ENST00000373010 SLC2A9Q9NRM0 540 aa16.08■□□□□ 0.16
USP49-202ENST00000373010 ASF1BQ9NVP2 202 aa16.08■□□□□ 0.16
USP49-202ENST00000373010 SLC22A20A6NK97 555 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms