RNA–Protein interactions for RNA: ENST00000368020.5

USF1-202, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-202ENST00000368020 RHOFQ9HBH0 211 aa12.09□□□□□ -0.47
USF1-202ENST00000368020 AK3Q9UIJ7 227 aa12.09□□□□□ -0.47
USF1-202ENST00000368020 MPC1Q9Y5U8 109 aa12.09□□□□□ -0.47
USF1-202ENST00000368020 FREM1Q5H8C1 2179 aa12.09□□□□□ -0.47
USF1-202ENST00000368020 TRBV6-7A0A0A0MS04 114 aa12.08□□□□□ -0.47
USF1-202ENST00000368020 SDCBPO00560 298 aaPredicted RBP12.08□□□□□ -0.47
USF1-202ENST00000368020 CCSO14618 274 aa12.08□□□□□ -0.47
USF1-202ENST00000368020 PLATP00750 562 aa12.08□□□□□ -0.47
USF1-202ENST00000368020 OR5H8P0DN80 308 aa12.08□□□□□ -0.47
USF1-202ENST00000368020 CCNOP22674 350 aa12.08□□□□□ -0.47
USF1-202ENST00000368020 RBMXP38159 391 aaKnown RBP12.08□□□□□ -0.47
USF1-202ENST00000368020 P2RX3P56373 397 aa12.08□□□□□ -0.47
USF1-202ENST00000368020 PRDX4Q13162 271 aa12.08□□□□□ -0.47
USF1-202ENST00000368020 MRPL49Q13405 166 aaKnown RBP12.08□□□□□ -0.47
USF1-202ENST00000368020 IGFL3Q6UXB1 125 aa12.08□□□□□ -0.47
USF1-202ENST00000368020 KDF1Q8NAX2 398 aaPredicted RBP12.08□□□□□ -0.47
USF1-202ENST00000368020 SEC22AQ96IW7 307 aa12.08□□□□□ -0.47
USF1-202ENST00000368020 ZNF2Q9BSG1 426 aaPredicted RBP12.08□□□□□ -0.47
USF1-202ENST00000368020 FAAP24Q9BTP7 215 aa12.08□□□□□ -0.47
USF1-202ENST00000368020 PFDN2Q9UHV9 154 aa12.08□□□□□ -0.47
USF1-202ENST00000368020 IGKV1-12A0A0C4DH73 117 aa12.08□□□□□ -0.48
USF1-202ENST00000368020 OR5B21A6NL26 309 aa12.08□□□□□ -0.48
USF1-202ENST00000368020 ANKRD30BLA7E2S9 258 aa12.08□□□□□ -0.48
USF1-202ENST00000368020 EEF1E1-BLOC1S5C9J1V9 151 aa12.08□□□□□ -0.48
USF1-202ENST00000368020 GEMIN2O14893 280 aaKnown RBP12.08□□□□□ -0.48
USF1-202ENST00000368020 CNOT4O95628 575 aaKnown RBP12.08□□□□□ -0.48
USF1-202ENST00000368020 IGKV1D-12P01611 117 aa12.08□□□□□ -0.48
USF1-202ENST00000368020 IGHG3P01860 377 aa12.08□□□□□ -0.48
USF1-202ENST00000368020 GLP1RP43220 463 aa12.08□□□□□ -0.48
USF1-202ENST00000368020 MPV17LQ2QL34 196 aa12.08□□□□□ -0.48
USF1-202ENST00000368020 C9orf135Q5VTT2 229 aa12.08□□□□□ -0.48
USF1-202ENST00000368020 ZNF660Q6AZW8 331 aaPredicted RBP12.08□□□□□ -0.48
USF1-202ENST00000368020 Q6ZS49 121 aa12.08□□□□□ -0.48
USF1-202ENST00000368020 NUFIP2Q7Z417 695 aaKnown RBP12.08□□□□□ -0.48
USF1-202ENST00000368020 PDZD9Q8IXQ8 264 aa12.08□□□□□ -0.48
USF1-202ENST00000368020 OR5M9Q8NGP3 310 aa12.08□□□□□ -0.48
USF1-202ENST00000368020 ZCCHC14Q8WYQ9 949 aaKnown RBP12.08□□□□□ -0.48
USF1-202ENST00000368020 PIK3IP1Q96FE7 263 aa12.08□□□□□ -0.48
USF1-202ENST00000368020 DEFB127Q9H1M4 99 aa12.08□□□□□ -0.48
USF1-202ENST00000368020 KCNIP3Q9Y2W7 256 aa12.08□□□□□ -0.48
USF1-202ENST00000368020 LIPGQ9Y5X9 500 aa12.08□□□□□ -0.48
USF1-202ENST00000368020 MGAQ8IWI9 3026 aa12.07□□□□□ -0.48
USF1-202ENST00000368020 C13orf42A0A1B0GVH6 325 aa12.07□□□□□ -0.48
USF1-202ENST00000368020 hCG_1807616A0A1W2PRN6 198 aa12.07□□□□□ -0.48
USF1-202ENST00000368020 FGF12P61328 243 aa12.07□□□□□ -0.48
USF1-202ENST00000368020 SUPT4H1P63272 117 aaKnown RBP12.07□□□□□ -0.48
USF1-202ENST00000368020 PIGYQ3MUY2 71 aa12.07□□□□□ -0.48
USF1-202ENST00000368020 LRRC37A5PQ49AS3 106 aa12.07□□□□□ -0.48
USF1-202ENST00000368020 TOR2AQ5JU69 321 aa12.07□□□□□ -0.48
USF1-202ENST00000368020 SLC25A26Q70HW3 274 aa12.07□□□□□ -0.48
USF1-202ENST00000368020 P4HA3Q7Z4N8 544 aa12.07□□□□□ -0.48
USF1-202ENST00000368020 ST8SIA2Q92186 375 aa12.07□□□□□ -0.48
USF1-202ENST00000368020 BCL2L2Q92843 193 aaPredicted RBP12.07□□□□□ -0.48
USF1-202ENST00000368020 C2orf50Q96LR7 162 aa12.07□□□□□ -0.48
USF1-202ENST00000368020 SULT4A1Q9BR01 284 aa12.07□□□□□ -0.48
USF1-202ENST00000368020 METTL8Q9H825 291 aaKnown RBP12.07□□□□□ -0.48
USF1-202ENST00000368020 SPACA1Q9HBV2 294 aa12.07□□□□□ -0.48
USF1-202ENST00000368020 RDH8Q9NYR8 311 aa12.07□□□□□ -0.48
USF1-202ENST00000368020 SPRR3Q9UBC9 169 aa12.07□□□□□ -0.48
USF1-202ENST00000368020 LOC400499M0QZD8 3231 aa12.07□□□□□ -0.48
USF1-202ENST00000368020 TRAV17A0A0B4J275 112 aa12.06□□□□□ -0.48
USF1-202ENST00000368020 TRAPPC2LH3BP13 241 aa12.06□□□□□ -0.48
USF1-202ENST00000368020 PDGFAP04085 211 aa12.06□□□□□ -0.48
USF1-202ENST00000368020 SFTPBP07988 381 aa12.06□□□□□ -0.48
USF1-202ENST00000368020 NMBP08949 121 aa12.06□□□□□ -0.48
USF1-202ENST00000368020 LYL1P12980 280 aa12.06□□□□□ -0.48
USF1-202ENST00000368020 HOXB1P14653 301 aaPredicted RBP12.06□□□□□ -0.48
USF1-202ENST00000368020 UCP3P55916 312 aa12.06□□□□□ -0.48
USF1-202ENST00000368020 BAMBIQ13145 260 aa12.06□□□□□ -0.48
USF1-202ENST00000368020 SLC9A3R2Q15599 337 aa12.06□□□□□ -0.48
USF1-202ENST00000368020 TBC1D28Q2M2D7 210 aa12.06□□□□□ -0.48
USF1-202ENST00000368020 ALKAL2Q6UX46 152 aa12.06□□□□□ -0.48
USF1-202ENST00000368020 CFAP47Q6ZTR5 3102 aa12.06□□□□□ -0.48
USF1-202ENST00000368020 ZNF573Q86YE8 665 aa12.06□□□□□ -0.48
USF1-202ENST00000368020 LRRC20Q8TCA0 184 aa12.06□□□□□ -0.48
USF1-202ENST00000368020 MAFIPQ8WZ33 124 aa12.06□□□□□ -0.48
USF1-202ENST00000368020 ARPC5LQ9BPX5 153 aa12.06□□□□□ -0.48
USF1-202ENST00000368020 SYT3Q9BQG1 590 aa12.06□□□□□ -0.48
USF1-202ENST00000368020 ZNF442Q9H7R0 627 aa12.06□□□□□ -0.48
USF1-202ENST00000368020 MBD2Q9UBB5 411 aa12.06□□□□□ -0.48
USF1-202ENST00000368020 GPR160Q9UJ42 338 aa12.06□□□□□ -0.48
USF1-202ENST00000368020 RNF222A6NCQ9 220 aa12.06□□□□□ -0.48
USF1-202ENST00000368020 CRYM-AS1A6NIL9 109 aa12.06□□□□□ -0.48
USF1-202ENST00000368020 POM121CA8CG34 1229 aa12.06□□□□□ -0.48
USF1-202ENST00000368020 CD300LBA8K4G0 201 aa12.06□□□□□ -0.48
USF1-202ENST00000368020 MKRN2OSH3BPM6 223 aa12.06□□□□□ -0.48
USF1-202ENST00000368020 I3L521 148 aa12.06□□□□□ -0.48
USF1-202ENST00000368020 SHOXO15266 292 aa12.06□□□□□ -0.48
USF1-202ENST00000368020 OR7C1O76099 320 aaPredicted RBP12.06□□□□□ -0.48
USF1-202ENST00000368020 SPDEFO95238 335 aa12.06□□□□□ -0.48
USF1-202ENST00000368020 IL18BPO95998 194 aa12.06□□□□□ -0.48
USF1-202ENST00000368020 IFNA21P01568 189 aa12.06□□□□□ -0.48
USF1-202ENST00000368020 ZNF728P0DKX0 622 aa12.06□□□□□ -0.48
USF1-202ENST00000368020 RPS2P15880 293 aaKnown RBP12.06□□□□□ -0.48
USF1-202ENST00000368020 GLRA1P23415 457 aa12.06□□□□□ -0.48
USF1-202ENST00000368020 AANATQ16613 207 aa12.06□□□□□ -0.48
USF1-202ENST00000368020 ABCA11PQ4W5N1 156 aa12.06□□□□□ -0.48
USF1-202ENST00000368020 TFAP2EQ6VUC0 442 aa12.06□□□□□ -0.48
USF1-202ENST00000368020 CALHM1Q8IU99 346 aa12.06□□□□□ -0.48
USF1-202ENST00000368020 SLC38A6Q8IZM9 456 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 115 ms