RNA–Protein interactions for RNA: ENST00000366942.3

USH2A-202, Transcript of usherin, humanhuman

TSL 1 (best) BASIC

Gene USH2A, Length 6,320 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-202ENST00000366942 KLHL30-AS1Q8NEE0 82 aa3.58□□□□□ -1.84
USH2A-202ENST00000366942 ZNF420Q8TAQ5 688 aaPredicted RBP3.58□□□□□ -1.84
USH2A-202ENST00000366942 TMEM74BQ9NUR3 256 aa3.58□□□□□ -1.84
USH2A-202ENST00000366942 EGFL7Q9UHF1 273 aa3.58□□□□□ -1.84
USH2A-202ENST00000366942 NFAT5O94916 1531 aa3.57□□□□□ -1.84
USH2A-202ENST00000366942 CLEC18AA5D8T8 446 aa3.57□□□□□ -1.84
USH2A-202ENST00000366942 EPOPA6NHQ4 379 aa3.57□□□□□ -1.84
USH2A-202ENST00000366942 FGF17O60258 216 aa3.57□□□□□ -1.84
USH2A-202ENST00000366942 CASP3P42574 277 aa3.57□□□□□ -1.84
USH2A-202ENST00000366942 UCP3P55916 312 aa3.57□□□□□ -1.84
USH2A-202ENST00000366942 FAM198BQ6UWH4 519 aa3.57□□□□□ -1.84
USH2A-202ENST00000366942 TMEM179BQ7Z7N9 219 aa3.57□□□□□ -1.84
USH2A-202ENST00000366942 PRSS35Q8N3Z0 413 aa3.57□□□□□ -1.84
USH2A-202ENST00000366942 RNF148Q8N7C7 305 aa3.57□□□□□ -1.84
USH2A-202ENST00000366942 OR10P1Q8NGE3 313 aa3.57□□□□□ -1.84
USH2A-202ENST00000366942 OR51S1Q8NGJ8 323 aa3.57□□□□□ -1.84
USH2A-202ENST00000366942 OR13F1Q8NGS4 319 aa3.57□□□□□ -1.84
USH2A-202ENST00000366942 UBALD1Q8TB05 177 aa3.57□□□□□ -1.84
USH2A-202ENST00000366942 ADAMTS17Q8TE56 1095 aa3.57□□□□□ -1.84
USH2A-202ENST00000366942 SGK494Q96LW2 274 aa3.57□□□□□ -1.84
USH2A-202ENST00000366942 TGIF2Q9GZN2 237 aa3.57□□□□□ -1.84
USH2A-202ENST00000366942 RANBP3Q9H6Z4 567 aaPredicted RBP3.57□□□□□ -1.84
USH2A-202ENST00000366942 EHFQ9NZC4 300 aa3.57□□□□□ -1.84
USH2A-202ENST00000366942 MLXQ9UH92 298 aa3.57□□□□□ -1.84
USH2A-202ENST00000366942 HS3ST3B1Q9Y662 390 aa3.57□□□□□ -1.84
USH2A-202ENST00000366942 CUL9Q8IWT3 2517 aa3.57□□□□□ -1.84
USH2A-202ENST00000366942 ZNF142P52746 1687 aaPredicted RBP3.57□□□□□ -1.84
USH2A-202ENST00000366942 SCN7AQ01118 1682 aa3.57□□□□□ -1.84
USH2A-202ENST00000366942 LOC100509620A0A075B734 347 aa3.57□□□□□ -1.84
USH2A-202ENST00000366942 TRAV39A0A0B4J263 110 aa3.57□□□□□ -1.84
USH2A-202ENST00000366942 TCRBV7S2A1N4TA0A589 114 aa3.57□□□□□ -1.84
USH2A-202ENST00000366942 HBZP02008 142 aa3.57□□□□□ -1.84
USH2A-202ENST00000366942 ISG15P05161 165 aa3.57□□□□□ -1.84
USH2A-202ENST00000366942 LYL1P12980 280 aa3.57□□□□□ -1.84
USH2A-202ENST00000366942 CRYGSP22914 178 aa3.57□□□□□ -1.84
USH2A-202ENST00000366942 HTR2AP28223 471 aa3.57□□□□□ -1.84
USH2A-202ENST00000366942 AMTP48728 403 aa3.57□□□□□ -1.84
USH2A-202ENST00000366942 NEDD8Q15843 81 aa3.57□□□□□ -1.84
USH2A-202ENST00000366942 PCK2Q16822 640 aa3.57□□□□□ -1.84
USH2A-202ENST00000366942 C14orf177Q52M58 125 aa3.57□□□□□ -1.84
USH2A-202ENST00000366942 PRSS57Q6UWY2 283 aa3.57□□□□□ -1.84
USH2A-202ENST00000366942 OLIG3Q7RTU3 272 aa3.57□□□□□ -1.84
USH2A-202ENST00000366942 CLEC18CQ8NCF0 446 aa3.57□□□□□ -1.84
USH2A-202ENST00000366942 OR6M1Q8NGM8 313 aa3.57□□□□□ -1.84
USH2A-202ENST00000366942 AKR7LQ8NHP1 331 aa3.57□□□□□ -1.84
USH2A-202ENST00000366942 ACY3Q96HD9 319 aa3.57□□□□□ -1.84
USH2A-202ENST00000366942 MACROD1Q9BQ69 325 aa3.57□□□□□ -1.84
USH2A-202ENST00000366942 CHST6Q9GZX3 395 aa3.57□□□□□ -1.84
USH2A-202ENST00000366942 CXCL16Q9H2A7 254 aa3.57□□□□□ -1.84
USH2A-202ENST00000366942 OR52D1Q9H346 318 aa3.57□□□□□ -1.84
USH2A-202ENST00000366942 NDUFA12Q9UI09 145 aa3.57□□□□□ -1.84
USH2A-202ENST00000366942 STRAPQ9Y3F4 350 aaKnown RBP3.57□□□□□ -1.84
USH2A-202ENST00000366942 HSPE1-MOB4S4R3N1 261 aa3.57□□□□□ -1.84
USH2A-202ENST00000366942 AKAP11Q9UKA4 1901 aa3.57□□□□□ -1.84
USH2A-202ENST00000366942 IGHV3OR16-10A0A075B7F0 116 aa3.57□□□□□ -1.84
USH2A-202ENST00000366942 A0A1W2PR77 199 aa3.57□□□□□ -1.84
USH2A-202ENST00000366942 DBX1A6NMT0 343 aa3.57□□□□□ -1.84
USH2A-202ENST00000366942 ZNF736B4DX44 427 aaPredicted RBP3.57□□□□□ -1.84
USH2A-202ENST00000366942 HOXB3P14651 431 aaPredicted RBP3.57□□□□□ -1.84
USH2A-202ENST00000366942 CTLA4P16410 223 aa3.57□□□□□ -1.84
USH2A-202ENST00000366942 MALP21145 153 aa3.57□□□□□ -1.84
USH2A-202ENST00000366942 PTBP1P26599 531 aaKnown RBP eCLIP3.57□□□□□ -1.84
USH2A-202ENST00000366942 WNT5AP41221 380 aa3.57□□□□□ -1.84
USH2A-202ENST00000366942 MAGEB1P43366 347 aa3.57□□□□□ -1.84
USH2A-202ENST00000366942 DAD1P61803 113 aa3.57□□□□□ -1.84
USH2A-202ENST00000366942 BSPH1Q075Z2 132 aa3.57□□□□□ -1.84
USH2A-202ENST00000366942 MAB21L1Q13394 359 aa3.57□□□□□ -1.84
USH2A-202ENST00000366942 PMS2P11Q13670 270 aa3.57□□□□□ -1.84
USH2A-202ENST00000366942 OPCMLQ14982 345 aa3.57□□□□□ -1.84
USH2A-202ENST00000366942 CHCHD2P9Q5T1J5 151 aaPredicted RBP3.57□□□□□ -1.84
USH2A-202ENST00000366942 RPL22L1Q6P5R6 122 aaKnown RBP3.57□□□□□ -1.84
USH2A-202ENST00000366942 DCXRQ7Z4W1 244 aa3.57□□□□□ -1.84
USH2A-202ENST00000366942 DMRTC2Q8IXT2 367 aaPredicted RBP3.57□□□□□ -1.84
USH2A-202ENST00000366942 MAP6Q96JE9 813 aa3.57□□□□□ -1.84
USH2A-202ENST00000366942 GPR173Q9NS66 373 aa3.57□□□□□ -1.84
USH2A-202ENST00000366942 MON2Q7Z3U7 1717 aa3.57□□□□□ -1.84
USH2A-202ENST00000366942 PKD1L2Q7Z442 2459 aa3.57□□□□□ -1.84
USH2A-202ENST00000366942 ARRDC5A6NEK1 342 aa3.57□□□□□ -1.84
USH2A-202ENST00000366942 OOEPA6NGQ2 149 aa3.57□□□□□ -1.84
USH2A-202ENST00000366942 SNRPGP15A8MWD9 76 aa3.57□□□□□ -1.84
USH2A-202ENST00000366942 F8WEM9 126 aa3.57□□□□□ -1.84
USH2A-202ENST00000366942 B3GALT4O96024 378 aa3.57□□□□□ -1.84
USH2A-202ENST00000366942 OR2T7P0C7T2 308 aa3.57□□□□□ -1.84
USH2A-202ENST00000366942 ZNF32P17041 273 aa3.57□□□□□ -1.84
USH2A-202ENST00000366942 CD200P41217 278 aa3.57□□□□□ -1.84
USH2A-202ENST00000366942 CNN1P51911 297 aaKnown RBP3.57□□□□□ -1.84
USH2A-202ENST00000366942 EMP1P54849 157 aa3.57□□□□□ -1.84
USH2A-202ENST00000366942 NDUFA6P56556 154 aa3.57□□□□□ -1.84
USH2A-202ENST00000366942 HERVK_113P61574 105 aa3.57□□□□□ -1.84
USH2A-202ENST00000366942 BTG1P62324 171 aa3.57□□□□□ -1.84
USH2A-202ENST00000366942 COL10A1Q03692 680 aa3.57□□□□□ -1.84
USH2A-202ENST00000366942 PRSS53Q2L4Q9 553 aa3.57□□□□□ -1.84
USH2A-202ENST00000366942 RNASE12Q5GAN4 147 aaKnown RBP3.57□□□□□ -1.84
USH2A-202ENST00000366942 MINOS1Q5TGZ0 78 aa3.57□□□□□ -1.84
USH2A-202ENST00000366942 SFRP4Q6FHJ7 346 aaPredicted RBP3.57□□□□□ -1.84
USH2A-202ENST00000366942 CLEC18BQ6UXF7 455 aa3.57□□□□□ -1.84
USH2A-202ENST00000366942 ZNF738Q8NE65 137 aa3.57□□□□□ -1.84
USH2A-202ENST00000366942 OR8B12Q8NGG6 310 aa3.57□□□□□ -1.84
USH2A-202ENST00000366942 DERL3Q96Q80 235 aa3.57□□□□□ -1.84
USH2A-202ENST00000366942 LINC01587Q99440 93 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms