RNA–Protein interactions for RNA: ENST00000363237.1

RNU6-1249P-201, Transcript of RNA, U6 small nuclear 1249, pseudogene, humanhuman

BASIC

Gene RNU6-1249P, Length 111 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1249P-201ENST00000363237 PCP2Q8IVA1 136 aa2.58□□□□□ -2
RNU6-1249P-201ENST00000363237 WDFY1Q8IWB7 410 aa2.58□□□□□ -2
RNU6-1249P-201ENST00000363237 CPNE9Q8IYJ1 553 aa2.58□□□□□ -2
RNU6-1249P-201ENST00000363237 HS3ST5Q8IZT8 346 aa2.58□□□□□ -2
RNU6-1249P-201ENST00000363237 ZNF485Q8NCK3 441 aa2.58□□□□□ -2
RNU6-1249P-201ENST00000363237 OR4P4Q8NGL7 312 aa2.58□□□□□ -2
RNU6-1249P-201ENST00000363237 OR52P1PQ8NH57 321 aa2.58□□□□□ -2
RNU6-1249P-201ENST00000363237 OR1L1Q8NH94 360 aa2.58□□□□□ -2
RNU6-1249P-201ENST00000363237 LINC01006Q8NI28 216 aa2.58□□□□□ -2
RNU6-1249P-201ENST00000363237 BLOC1S5Q8TDH9 187 aa2.58□□□□□ -2
RNU6-1249P-201ENST00000363237 ORAOV1Q8WV07 137 aa2.58□□□□□ -2
RNU6-1249P-201ENST00000363237 TMEM158Q8WZ71 300 aa2.58□□□□□ -2
RNU6-1249P-201ENST00000363237 RDH5Q92781 318 aa2.58□□□□□ -2
RNU6-1249P-201ENST00000363237 TESCQ96BS2 214 aa2.58□□□□□ -2
RNU6-1249P-201ENST00000363237 FMC1Q96HJ9 113 aa2.58□□□□□ -2
RNU6-1249P-201ENST00000363237 CCDC42Q96M95 316 aa2.58□□□□□ -2
RNU6-1249P-201ENST00000363237 PACRGQ96M98 296 aaPredicted RBP2.58□□□□□ -2
RNU6-1249P-201ENST00000363237 STACQ99469 402 aa2.58□□□□□ -2
RNU6-1249P-201ENST00000363237 SLC25A31Q9H0C2 315 aa2.58□□□□□ -2
RNU6-1249P-201ENST00000363237 PARP11Q9NR21 331 aa2.58□□□□□ -2
RNU6-1249P-201ENST00000363237 OR12D3Q9UGF7 316 aa2.58□□□□□ -2
RNU6-1249P-201ENST00000363237 SLC22A13Q9Y226 551 aa2.58□□□□□ -2
RNU6-1249P-201ENST00000363237 SBDSQ9Y3A5 250 aaKnown RBP eCLIP2.58□□□□□ -2
RNU6-1249P-201ENST00000363237 INSIG2Q9Y5U4 225 aa2.58□□□□□ -2
RNU6-1249P-201ENST00000363237 MIA3Q5JRA6 1907 aa2.58□□□□□ -2
RNU6-1249P-201ENST00000363237 SETD1AO15047 1707 aaKnown RBP2.57□□□□□ -2
RNU6-1249P-201ENST00000363237 LTBP1Q14766 1721 aa2.57□□□□□ -2
RNU6-1249P-201ENST00000363237 TSPOAP1O95153 1857 aa2.57□□□□□ -2
RNU6-1249P-201ENST00000363237 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP2.57□□□□□ -2
RNU6-1249P-201ENST00000363237 IGKV6D-21A0A0A0MT36 114 aa2.57□□□□□ -2
RNU6-1249P-201ENST00000363237 IGHV3-64DA0A0J9YX35 117 aa2.57□□□□□ -2
RNU6-1249P-201ENST00000363237 A0A0U1RQV1 116 aa2.57□□□□□ -2
RNU6-1249P-201ENST00000363237 LOC389332A0A1B0GUA5 103 aa2.57□□□□□ -2
RNU6-1249P-201ENST00000363237 F5H5T6 163 aa2.57□□□□□ -2
RNU6-1249P-201ENST00000363237 ACOX3O15254 700 aa2.57□□□□□ -2
RNU6-1249P-201ENST00000363237 CHST10O43529 356 aa2.57□□□□□ -2
RNU6-1249P-201ENST00000363237 GATBO75879 557 aaKnown RBP2.57□□□□□ -2
RNU6-1249P-201ENST00000363237 DCTN3O75935 186 aa2.57□□□□□ -2
RNU6-1249P-201ENST00000363237 CD74P04233 296 aa2.57□□□□□ -2
RNU6-1249P-201ENST00000363237 TYMSP04818 313 aa2.57□□□□□ -2
RNU6-1249P-201ENST00000363237 CD99P14209 185 aa2.57□□□□□ -2
RNU6-1249P-201ENST00000363237 SPNP16150 400 aa2.57□□□□□ -2
RNU6-1249P-201ENST00000363237 CFL1P23528 166 aaKnown RBP2.57□□□□□ -2
RNU6-1249P-201ENST00000363237 PRTN3P24158 256 aa2.57□□□□□ -2
RNU6-1249P-201ENST00000363237 IFNGR2P38484 337 aa2.57□□□□□ -2
RNU6-1249P-201ENST00000363237 CBX5P45973 191 aa2.57□□□□□ -2
RNU6-1249P-201ENST00000363237 ACOT2P49753 483 aa2.57□□□□□ -2
RNU6-1249P-201ENST00000363237 LHX2P50458 406 aa2.57□□□□□ -2
RNU6-1249P-201ENST00000363237 PPP1CAP62136 330 aa2.57□□□□□ -2
RNU6-1249P-201ENST00000363237 RAP1AP62834 184 aa2.57□□□□□ -2
RNU6-1249P-201ENST00000363237 GNB2P62879 340 aa2.57□□□□□ -2
RNU6-1249P-201ENST00000363237 GRB2P62993 217 aaKnown RBP2.57□□□□□ -2
RNU6-1249P-201ENST00000363237 C4orf26Q17RF5 130 aa2.57□□□□□ -2
RNU6-1249P-201ENST00000363237 CLLU1OSQ5K130 101 aa2.57□□□□□ -2
RNU6-1249P-201ENST00000363237 CST9Q5W186 159 aa2.57□□□□□ -2
RNU6-1249P-201ENST00000363237 SPOPLQ6IQ16 392 aa2.57□□□□□ -2
RNU6-1249P-201ENST00000363237 TMEM205Q6UW68 189 aa2.57□□□□□ -2
RNU6-1249P-201ENST00000363237 Q6ZTC4 211 aa2.57□□□□□ -2
RNU6-1249P-201ENST00000363237 FAM231DQ6ZW35 169 aa2.57□□□□□ -2
RNU6-1249P-201ENST00000363237 ZNF429Q86V71 674 aa2.57□□□□□ -2
RNU6-1249P-201ENST00000363237 CALHM1Q8IU99 346 aa2.57□□□□□ -2
RNU6-1249P-201ENST00000363237 MUC15Q8N387 334 aa2.57□□□□□ -2
RNU6-1249P-201ENST00000363237 Q8N976 141 aa2.57□□□□□ -2
RNU6-1249P-201ENST00000363237 OR2M7Q8NG81 312 aa2.57□□□□□ -2
RNU6-1249P-201ENST00000363237 OR8K1Q8NGG5 319 aa2.57□□□□□ -2
RNU6-1249P-201ENST00000363237 OR5D18Q8NGL1 313 aa2.57□□□□□ -2
RNU6-1249P-201ENST00000363237 DTD1Q8TEA8 209 aa2.57□□□□□ -2
RNU6-1249P-201ENST00000363237 CASTOR1Q8WTX7 329 aa2.57□□□□□ -2
RNU6-1249P-201ENST00000363237 CCL17Q92583 94 aa2.57□□□□□ -2
RNU6-1249P-201ENST00000363237 NEURL3Q96EH8 262 aa2.57□□□□□ -2
RNU6-1249P-201ENST00000363237 BMFQ96LC9 184 aa2.57□□□□□ -2
RNU6-1249P-201ENST00000363237 C18orf15Q96N68 181 aa2.57□□□□□ -2
RNU6-1249P-201ENST00000363237 OR2A5Q96R48 311 aa2.57□□□□□ -2
RNU6-1249P-201ENST00000363237 GGTLC1Q9BX51 225 aa2.57□□□□□ -2
RNU6-1249P-201ENST00000363237 CDCA4Q9BXL8 241 aa2.57□□□□□ -2
RNU6-1249P-201ENST00000363237 SLC17A9Q9BYT1 436 aa2.57□□□□□ -2
RNU6-1249P-201ENST00000363237 OR51E2Q9H255 320 aa2.57□□□□□ -2
RNU6-1249P-201ENST00000363237 METTL17Q9H7H0 456 aaPredicted RBP2.57□□□□□ -2
RNU6-1249P-201ENST00000363237 HMG20AQ9NP66 347 aa2.57□□□□□ -2
RNU6-1249P-201ENST00000363237 DMAC2Q9NW81 257 aa2.57□□□□□ -2
RNU6-1249P-201ENST00000363237 CACNG2Q9Y698 323 aa2.57□□□□□ -2
RNU6-1249P-201ENST00000363237 WSB1Q9Y6I7 421 aa2.57□□□□□ -2
RNU6-1249P-201ENST00000363237 SNAPC4Q5SXM2 1469 aa2.57□□□□□ -2
RNU6-1249P-201ENST00000363237 PIKFYVEQ9Y2I7 2098 aa2.56□□□□□ -2
RNU6-1249P-201ENST00000363237 A0A0G2JMP0 313 aa2.56□□□□□ -2
RNU6-1249P-201ENST00000363237 A0A0X1KG70 313 aa2.56□□□□□ -2
RNU6-1249P-201ENST00000363237 A0A1B0GUA9 196 aa2.56□□□□□ -2
RNU6-1249P-201ENST00000363237 A0A1B0GVX0 72 aa2.56□□□□□ -2
RNU6-1249P-201ENST00000363237 MYBPHLA2RUH7 354 aa2.56□□□□□ -2
RNU6-1249P-201ENST00000363237 A6NDX4 124 aa2.56□□□□□ -2
RNU6-1249P-201ENST00000363237 CD300LBA8K4G0 201 aa2.56□□□□□ -2
RNU6-1249P-201ENST00000363237 FFAR1O14842 300 aa2.56□□□□□ -2
RNU6-1249P-201ENST00000363237 SOCS1O15524 211 aa2.56□□□□□ -2
RNU6-1249P-201ENST00000363237 SLC37A4O43826 429 aa2.56□□□□□ -2
RNU6-1249P-201ENST00000363237 GCM2O75603 506 aaPredicted RBP2.56□□□□□ -2
RNU6-1249P-201ENST00000363237 OR5F1O95221 314 aa2.56□□□□□ -2
RNU6-1249P-201ENST00000363237 LYPLA2O95372 231 aa2.56□□□□□ -2
RNU6-1249P-201ENST00000363237 NSA2O95478 260 aaKnown RBP2.56□□□□□ -2
RNU6-1249P-201ENST00000363237 IGLV2-8P01709 118 aa2.56□□□□□ -2
RNU6-1249P-201ENST00000363237 IGHV3-11P01762 117 aa2.56□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms