RNA–Protein interactions for RNA: ENST00000357179.9

TOP3B-201, Transcript of DNA topoisomerase III beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3B, Length 2,863 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-201ENST00000357179 PDLIM4P50479 330 aa12.81□□□□□ -0.36
TOP3B-201ENST00000357179 EWSR1Q01844 656 aaKnown RBP eCLIP12.81□□□□□ -0.36
TOP3B-201ENST00000357179 HERPUD1Q15011 391 aa12.81□□□□□ -0.36
TOP3B-201ENST00000357179 IQCJQ1A5X6 159 aa12.81□□□□□ -0.36
TOP3B-201ENST00000357179 KLHL24Q6TFL4 600 aa12.81□□□□□ -0.36
TOP3B-201ENST00000357179 FBXL14Q8N1E6 418 aa12.81□□□□□ -0.36
TOP3B-201ENST00000357179 DTD1Q8TEA8 209 aa12.81□□□□□ -0.36
TOP3B-201ENST00000357179 DAZLQ92904 295 aaKnown RBP12.81□□□□□ -0.36
TOP3B-201ENST00000357179 LRRC61Q9BV99 259 aa12.81□□□□□ -0.36
TOP3B-201ENST00000357179 HIPK2Q9H2X6 1198 aa12.81□□□□□ -0.36
TOP3B-201ENST00000357179 GPR84Q9NQS5 396 aa12.81□□□□□ -0.36
TOP3B-201ENST00000357179 MYOTQ9UBF9 498 aa12.81□□□□□ -0.36
TOP3B-201ENST00000357179 NPIPA1Q9UND3 350 aa12.81□□□□□ -0.36
TOP3B-201ENST00000357179 CDC14CA4D256 554 aa12.8□□□□□ -0.36
TOP3B-201ENST00000357179 ST8SIA3O43173 380 aa12.8□□□□□ -0.36
TOP3B-201ENST00000357179 RPLP1P05386 114 aaKnown RBP12.8□□□□□ -0.36
TOP3B-201ENST00000357179 OR5AS1Q8N127 324 aa12.8□□□□□ -0.36
TOP3B-201ENST00000357179 TMEM234Q8WY98 164 aa12.8□□□□□ -0.36
TOP3B-201ENST00000357179 BOD1Q96IK1 185 aa12.8□□□□□ -0.36
TOP3B-201ENST00000357179 THOC3Q96J01 351 aaKnown RBP12.8□□□□□ -0.36
TOP3B-201ENST00000357179 ZNF2Q9BSG1 426 aaPredicted RBP12.8□□□□□ -0.36
TOP3B-201ENST00000357179 URM1Q9BTM9 101 aaKnown RBP12.8□□□□□ -0.36
TOP3B-201ENST00000357179 PBOV1Q9GZY1 135 aa12.8□□□□□ -0.36
TOP3B-201ENST00000357179 CENPMQ9NSP4 180 aa12.8□□□□□ -0.36
TOP3B-201ENST00000357179 KIR2DL5BA0A0G2JN68 375 aa12.8□□□□□ -0.36
TOP3B-201ENST00000357179 KIR2DL5BA0A0G2JPC4 375 aa12.8□□□□□ -0.36
TOP3B-201ENST00000357179 XKRY2A2RUG3 117 aa12.8□□□□□ -0.36
TOP3B-201ENST00000357179 MSX1P28360 303 aa12.8□□□□□ -0.36
TOP3B-201ENST00000357179 ASCL1P50553 236 aa12.8□□□□□ -0.36
TOP3B-201ENST00000357179 RPL23AP62750 156 aaKnown RBP12.8□□□□□ -0.36
TOP3B-201ENST00000357179 FMODQ06828 376 aa12.8□□□□□ -0.36
TOP3B-201ENST00000357179 TMEM187Q14656 261 aa12.8□□□□□ -0.36
TOP3B-201ENST00000357179 C1orf194Q5T5A4 169 aa12.8□□□□□ -0.36
TOP3B-201ENST00000357179 FAM90A2PQ658T7 463 aa12.8□□□□□ -0.36
TOP3B-201ENST00000357179 KIR2DL5AQ8N109 375 aa12.8□□□□□ -0.36
TOP3B-201ENST00000357179 FAM89BQ8N5H3 189 aa12.8□□□□□ -0.36
TOP3B-201ENST00000357179 OR14L1PQ8NHC6 308 aa12.8□□□□□ -0.36
TOP3B-201ENST00000357179 NPRL2Q8WTW4 380 aa12.8□□□□□ -0.36
TOP3B-201ENST00000357179 HIST1H2AAQ96QV6 131 aa12.8□□□□□ -0.36
TOP3B-201ENST00000357179 ETV2O00321 342 aaPredicted RBP12.79□□□□□ -0.36
TOP3B-201ENST00000357179 CRTAPO75718 401 aaPredicted RBP12.79□□□□□ -0.36
TOP3B-201ENST00000357179 ZFP36L1Q07352 338 aaKnown RBP12.79□□□□□ -0.36
TOP3B-201ENST00000357179 LYZL2Q7Z4W2 148 aa12.79□□□□□ -0.36
TOP3B-201ENST00000357179 MRPL52Q86TS9 123 aaKnown RBP12.79□□□□□ -0.36
TOP3B-201ENST00000357179 ZNF441Q8N8Z8 693 aa12.79□□□□□ -0.36
TOP3B-201ENST00000357179 OR52M1Q8NGK5 317 aa12.79□□□□□ -0.36
TOP3B-201ENST00000357179 HAS2Q92819 552 aa12.79□□□□□ -0.36
TOP3B-201ENST00000357179 SLAMF6Q96DU3 332 aa12.79□□□□□ -0.36
TOP3B-201ENST00000357179 OR10A2Q9H208 303 aa12.79□□□□□ -0.36
TOP3B-201ENST00000357179 MOB1AQ9H8S9 216 aa12.79□□□□□ -0.36
TOP3B-201ENST00000357179 PADI1Q9ULC6 663 aa12.79□□□□□ -0.36
TOP3B-201ENST00000357179 IGHV5-51A0A0C4DH38 117 aa12.79□□□□□ -0.36
TOP3B-201ENST00000357179 FOXI3A8MTJ6 420 aaPredicted RBP12.79□□□□□ -0.36
TOP3B-201ENST00000357179 TP53I11O14683 189 aa12.79□□□□□ -0.36
TOP3B-201ENST00000357179 RRP8O43159 456 aaKnown RBP12.79□□□□□ -0.36
TOP3B-201ENST00000357179 ZNF43P17038 809 aa12.79□□□□□ -0.36
TOP3B-201ENST00000357179 SFTPDP35247 375 aa12.79□□□□□ -0.36
TOP3B-201ENST00000357179 OR3A1P47881 315 aa12.79□□□□□ -0.36
TOP3B-201ENST00000357179 THEM4Q5T1C6 240 aa12.79□□□□□ -0.36
TOP3B-201ENST00000357179 ZNF880Q6PDB4 577 aa12.79□□□□□ -0.36
TOP3B-201ENST00000357179 FBXW12Q6X9E4 464 aa12.79□□□□□ -0.36
TOP3B-201ENST00000357179 H1FNTQ75WM6 255 aaPredicted RBP12.79□□□□□ -0.36
TOP3B-201ENST00000357179 ZNF573Q86YE8 665 aa12.79□□□□□ -0.36
TOP3B-201ENST00000357179 LRTM2Q8N967 370 aa12.79□□□□□ -0.36
TOP3B-201ENST00000357179 WNT5BQ9H1J7 359 aa12.79□□□□□ -0.36
TOP3B-201ENST00000357179 COPS7AQ9UBW8 275 aa12.79□□□□□ -0.36
TOP3B-201ENST00000357179 IGKV1D-8A0A087WSZ0 117 aa12.79□□□□□ -0.36
TOP3B-201ENST00000357179 LINC01565O15544 149 aa12.79□□□□□ -0.36
TOP3B-201ENST00000357179 DBHP09172 617 aa12.79□□□□□ -0.36
TOP3B-201ENST00000357179 FGF5P12034 268 aa12.79□□□□□ -0.36
TOP3B-201ENST00000357179 DUSP1P28562 367 aa12.79□□□□□ -0.36
TOP3B-201ENST00000357179 ZNF774Q6NX45 483 aa12.79□□□□□ -0.36
TOP3B-201ENST00000357179 OR1N1Q8NGS0 311 aa12.79□□□□□ -0.36
TOP3B-201ENST00000357179 ST8SIA1Q92185 356 aa12.79□□□□□ -0.36
TOP3B-201ENST00000357179 ACY3Q96HD9 319 aa12.79□□□□□ -0.36
TOP3B-201ENST00000357179 LOC102723971A0A1B0GUV8 181 aa12.78□□□□□ -0.36
TOP3B-201ENST00000357179 DHRS7CA6NNS2 312 aa12.78□□□□□ -0.36
TOP3B-201ENST00000357179 IGLV3-19P01714 112 aa12.78□□□□□ -0.36
TOP3B-201ENST00000357179 HPNP05981 417 aa12.78□□□□□ -0.36
TOP3B-201ENST00000357179 MMP7P09237 267 aaPredicted RBP12.78□□□□□ -0.36
TOP3B-201ENST00000357179 ZNF20P17024 532 aa12.78□□□□□ -0.36
TOP3B-201ENST00000357179 PIGPP57054 158 aa12.78□□□□□ -0.36
TOP3B-201ENST00000357179 SP6Q3SY56 376 aa12.78□□□□□ -0.36
TOP3B-201ENST00000357179 NKAIN1Q4KMZ8 207 aa12.78□□□□□ -0.36
TOP3B-201ENST00000357179 ZNF283Q8N7M2 679 aa12.78□□□□□ -0.36
TOP3B-201ENST00000357179 PYGO2Q9BRQ0 406 aa12.78□□□□□ -0.36
TOP3B-201ENST00000357179 CTDSP1Q9GZU7 261 aa12.78□□□□□ -0.36
TOP3B-201ENST00000357179 KLHL13Q9P2N7 655 aa12.78□□□□□ -0.36
TOP3B-201ENST00000357179 IGKV1D-43A0A0B4J1Z2 117 aa12.78□□□□□ -0.36
TOP3B-201ENST00000357179 A6NNC1 897 aa12.78□□□□□ -0.36
TOP3B-201ENST00000357179 ZNF878C9JN71 531 aa12.78□□□□□ -0.36
TOP3B-201ENST00000357179 H3BMH7 237 aa12.78□□□□□ -0.36
TOP3B-201ENST00000357179 PITX3O75364 302 aa12.78□□□□□ -0.36
TOP3B-201ENST00000357179 IL11P20809 199 aa12.78□□□□□ -0.36
TOP3B-201ENST00000357179 OR1D4P47884 311 aa12.78□□□□□ -0.36
TOP3B-201ENST00000357179 CSNK1A1P48729 337 aa12.78□□□□□ -0.36
TOP3B-201ENST00000357179 C9orf50Q5SZB4 431 aa12.78□□□□□ -0.36
TOP3B-201ENST00000357179 C11orf40Q8WZ69 217 aa12.78□□□□□ -0.36
TOP3B-201ENST00000357179 TMEM18Q96B42 140 aa12.78□□□□□ -0.36
TOP3B-201ENST00000357179 KLHDC7BQ96G42 594 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 192.2 ms