RNA–Protein interactions for RNA: ENST00000324340.13

DDX39A-202, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,355 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-202ENST00000324340 CHST5Q9GZS9 411 aa10.97□□□□□ -0.65
DDX39A-202ENST00000324340 CDH20Q9HBT6 801 aa10.97□□□□□ -0.65
DDX39A-202ENST00000324340 TUBG2Q9NRH3 451 aa10.97□□□□□ -0.65
DDX39A-202ENST00000324340 DCAF16Q9NXF7 216 aa10.97□□□□□ -0.65
DDX39A-202ENST00000324340 NKIRAS2Q9NYR9 191 aa10.97□□□□□ -0.65
DDX39A-202ENST00000324340 STARD10Q9Y365 291 aa10.97□□□□□ -0.65
DDX39A-202ENST00000324340 PRRC2CQ9Y520 2896 aaKnown RBP10.96□□□□□ -0.65
DDX39A-202ENST00000324340 FXYD6-FXYD2A0A087WZ82 144 aa10.96□□□□□ -0.65
DDX39A-202ENST00000324340 TRAV20A0A0B4J274 112 aa10.96□□□□□ -0.65
DDX39A-202ENST00000324340 RNF222A6NCQ9 220 aa10.96□□□□□ -0.65
DDX39A-202ENST00000324340 ZNF729A6NN14 1252 aaPredicted RBP10.96□□□□□ -0.65
DDX39A-202ENST00000324340 POM121CA8CG34 1229 aa10.96□□□□□ -0.65
DDX39A-202ENST00000324340 ST8SIA5O15466 376 aa10.96□□□□□ -0.65
DDX39A-202ENST00000324340 IGHV2-70P01814 119 aa10.96□□□□□ -0.65
DDX39A-202ENST00000324340 GNALP38405 381 aa10.96□□□□□ -0.65
DDX39A-202ENST00000324340 C4orf17Q53FE4 359 aa10.96□□□□□ -0.65
DDX39A-202ENST00000324340 FAM166AQ6J272 317 aa10.96□□□□□ -0.65
DDX39A-202ENST00000324340 FBXW12Q6X9E4 464 aa10.96□□□□□ -0.65
DDX39A-202ENST00000324340 C22orf34Q6ZV56 151 aa10.96□□□□□ -0.65
DDX39A-202ENST00000324340 STX12Q86Y82 276 aa10.96□□□□□ -0.65
DDX39A-202ENST00000324340 C1orf174Q8IYL3 243 aa10.96□□□□□ -0.65
DDX39A-202ENST00000324340 CMTM4Q8IZR5 234 aa10.96□□□□□ -0.65
DDX39A-202ENST00000324340 LILRB2Q8N423 598 aa10.96□□□□□ -0.65
DDX39A-202ENST00000324340 OR51A2Q8NGJ7 313 aa10.96□□□□□ -0.65
DDX39A-202ENST00000324340 SSC4DQ8WTU2 575 aa10.96□□□□□ -0.65
DDX39A-202ENST00000324340 S100A16Q96FQ6 103 aaKnown RBP10.96□□□□□ -0.65
DDX39A-202ENST00000324340 FXYD6Q9H0Q3 95 aa10.96□□□□□ -0.65
DDX39A-202ENST00000324340 PIGLQ9Y2B2 252 aa10.96□□□□□ -0.65
DDX39A-202ENST00000324340 PLEKHA6Q9Y2H5 1048 aa10.96□□□□□ -0.65
DDX39A-202ENST00000324340 POLEQ07864 2286 aa10.95□□□□□ -0.66
DDX39A-202ENST00000324340 C5orf52A6NGY3 159 aa10.95□□□□□ -0.66
DDX39A-202ENST00000324340 A6NIN4 97 aa10.95□□□□□ -0.66
DDX39A-202ENST00000324340 ERCC1P07992 297 aaPredicted RBP10.95□□□□□ -0.66
DDX39A-202ENST00000324340 CSF1P09603 554 aa10.95□□□□□ -0.66
DDX39A-202ENST00000324340 FAHP16930 419 aa10.95□□□□□ -0.66
DDX39A-202ENST00000324340 BTF3P20290 206 aaKnown RBP10.95□□□□□ -0.66
DDX39A-202ENST00000324340 BDKRB2P30411 391 aa10.95□□□□□ -0.66
DDX39A-202ENST00000324340 UCP2P55851 309 aa10.95□□□□□ -0.66
DDX39A-202ENST00000324340 NAAAQ02083 359 aa10.95□□□□□ -0.66
DDX39A-202ENST00000324340 TLE1Q04724 770 aa10.95□□□□□ -0.66
DDX39A-202ENST00000324340 NKPD1Q17RQ9 610 aa10.95□□□□□ -0.66
DDX39A-202ENST00000324340 GLT8D1Q68CQ7 371 aa10.95□□□□□ -0.66
DDX39A-202ENST00000324340 UNQ6126/PRO20091Q6UXV3 157 aa10.95□□□□□ -0.66
DDX39A-202ENST00000324340 OR5AS1Q8N127 324 aa10.95□□□□□ -0.66
DDX39A-202ENST00000324340 TMEM185AQ8NFB2 350 aa10.95□□□□□ -0.66
DDX39A-202ENST00000324340 OR52I2Q8NH67 350 aa10.95□□□□□ -0.66
DDX39A-202ENST00000324340 ZNF671Q8TAW3 534 aa10.95□□□□□ -0.66
DDX39A-202ENST00000324340 THAP6Q8TBB0 222 aa10.95□□□□□ -0.66
DDX39A-202ENST00000324340 ARL11Q969Q4 196 aa10.95□□□□□ -0.66
DDX39A-202ENST00000324340 FOXRED1Q96CU9 486 aaPredicted RBP10.95□□□□□ -0.66
DDX39A-202ENST00000324340 POFUT1Q9H488 388 aa10.95□□□□□ -0.66
DDX39A-202ENST00000324340 PPP1R14DQ9NXH3 145 aa10.95□□□□□ -0.66
DDX39A-202ENST00000324340 ERRFI1Q9UJM3 462 aaPredicted RBP10.95□□□□□ -0.66
DDX39A-202ENST00000324340 FLVCR2Q9UPI3 526 aa10.95□□□□□ -0.66
DDX39A-202ENST00000324340 RHBDD3Q9Y3P4 386 aa10.95□□□□□ -0.66
DDX39A-202ENST00000324340 ATRXP46100 2492 aa10.95□□□□□ -0.66
DDX39A-202ENST00000324340 IGHV2OR16-5A0A0B4J2B6 119 aa10.94□□□□□ -0.66
DDX39A-202ENST00000324340 IGKV1-9A0A0C4DH69 117 aa10.94□□□□□ -0.66
DDX39A-202ENST00000324340 ZNF816-ZNF321PA0A0X1KG74 233 aa10.94□□□□□ -0.66
DDX39A-202ENST00000324340 C1orf196B1AJZ1 125 aa10.94□□□□□ -0.66
DDX39A-202ENST00000324340 SLC17A2O00624 439 aa10.94□□□□□ -0.66
DDX39A-202ENST00000324340 CRYBA1P05813 215 aa10.94□□□□□ -0.66
DDX39A-202ENST00000324340 SNRPBP14678 240 aaKnown RBP10.94□□□□□ -0.66
DDX39A-202ENST00000324340 HLA-GP17693 338 aa10.94□□□□□ -0.66
DDX39A-202ENST00000324340 GNLYP22749 145 aa10.94□□□□□ -0.66
DDX39A-202ENST00000324340 PTAFRP25105 342 aa10.94□□□□□ -0.66
DDX39A-202ENST00000324340 PPP1CBP62140 327 aa10.94□□□□□ -0.66
DDX39A-202ENST00000324340 SPOCK1Q08629 439 aa10.94□□□□□ -0.66
DDX39A-202ENST00000324340 UBE2V2Q15819 145 aa10.94□□□□□ -0.66
DDX39A-202ENST00000324340 C1orf100Q5SVJ3 147 aa10.94□□□□□ -0.66
DDX39A-202ENST00000324340 MRPL21Q7Z2W9 205 aaKnown RBP10.94□□□□□ -0.66
DDX39A-202ENST00000324340 ZNF561Q8N587 486 aa10.94□□□□□ -0.66
DDX39A-202ENST00000324340 CSNK2A3Q8NEV1 391 aa10.94□□□□□ -0.66
DDX39A-202ENST00000324340 OR13C9Q8NGT0 318 aa10.94□□□□□ -0.66
DDX39A-202ENST00000324340 STOML3Q8TAV4 291 aa10.94□□□□□ -0.66
DDX39A-202ENST00000324340 NANPQ8TBE9 248 aa10.94□□□□□ -0.66
DDX39A-202ENST00000324340 RNASE6Q93091 150 aaKnown RBP10.94□□□□□ -0.66
DDX39A-202ENST00000324340 HAVCR1Q96D42 359 aa10.94□□□□□ -0.66
DDX39A-202ENST00000324340 BBC3Q96PG8 261 aaPredicted RBP10.94□□□□□ -0.66
DDX39A-202ENST00000324340 TUBA4BQ9H853 241 aa10.94□□□□□ -0.66
DDX39A-202ENST00000324340 TMEM100Q9NV29 134 aa10.94□□□□□ -0.66
DDX39A-202ENST00000324340 STEAP1Q9UHE8 339 aa10.94□□□□□ -0.66
DDX39A-202ENST00000324340 DMRT1Q9Y5R6 373 aa10.94□□□□□ -0.66
DDX39A-202ENST00000324340 POMT1Q9Y6A1 747 aa10.94□□□□□ -0.66
DDX39A-202ENST00000324340 ZFYVE26Q68DK2 2539 aa10.94□□□□□ -0.66
DDX39A-202ENST00000324340 A0A0B4J203 849 aa10.93□□□□□ -0.66
DDX39A-202ENST00000324340 SIX6O95475 246 aa10.93□□□□□ -0.66
DDX39A-202ENST00000324340 CST4P01036 141 aa10.93□□□□□ -0.66
DDX39A-202ENST00000324340 THBDP07204 575 aa10.93□□□□□ -0.66
DDX39A-202ENST00000324340 SPP1P10451 314 aa10.93□□□□□ -0.66
DDX39A-202ENST00000324340 AGAP20933 346 aa10.93□□□□□ -0.66
DDX39A-202ENST00000324340 UQCRFS1P47985 274 aa10.93□□□□□ -0.66
DDX39A-202ENST00000324340 PTH2RP49190 550 aa10.93□□□□□ -0.66
DDX39A-202ENST00000324340 ZNF83P51522 516 aa10.93□□□□□ -0.66
DDX39A-202ENST00000324340 H2BFSP57053 126 aa10.93□□□□□ -0.66
DDX39A-202ENST00000324340 CD81P60033 236 aa10.93□□□□□ -0.66
DDX39A-202ENST00000324340 SMCO1Q147U7 214 aa10.93□□□□□ -0.66
DDX39A-202ENST00000324340 PEA15Q15121 130 aa10.93□□□□□ -0.66
DDX39A-202ENST00000324340 HMGN3Q15651 99 aa10.93□□□□□ -0.66
DDX39A-202ENST00000324340 FIP1L1Q6UN15 594 aaKnown RBP10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms