RNA–Protein interactions for RNA: ENST00000316048.2

SMCO3-201, Transcript of single-pass membrane protein with coiled-coil domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO3, Length 2,104 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO3-201ENST00000316048 TBL1XR1Q9BZK7 514 aa3.12□□□□□ -1.91
SMCO3-201ENST00000316048 NDEL1Q9GZM8 345 aa3.12□□□□□ -1.91
SMCO3-201ENST00000316048 GFRA4Q9GZZ7 299 aa3.12□□□□□ -1.91
SMCO3-201ENST00000316048 C12orf10Q9HB07 376 aa3.12□□□□□ -1.91
SMCO3-201ENST00000316048 CMC2Q9NRP2 79 aa3.12□□□□□ -1.91
SMCO3-201ENST00000316048 CLEC2DQ9UHP7 191 aa3.12□□□□□ -1.91
SMCO3-201ENST00000316048 KLHL21Q9UJP4 597 aa3.12□□□□□ -1.91
SMCO3-201ENST00000316048 SSR3Q9UNL2 185 aa3.12□□□□□ -1.91
SMCO3-201ENST00000316048 SIGLEC7Q9Y286 467 aa3.12□□□□□ -1.91
SMCO3-201ENST00000316048 ZNF337Q9Y3M9 751 aa3.12□□□□□ -1.91
SMCO3-201ENST00000316048 TIMM10BQ9Y5J6 103 aa3.12□□□□□ -1.91
SMCO3-201ENST00000316048 ABCA7Q8IZY2 2146 aa3.12□□□□□ -1.91
SMCO3-201ENST00000316048 SCN2AQ99250 2005 aa3.12□□□□□ -1.91
SMCO3-201ENST00000316048 EML5Q05BV3 1969 aa3.11□□□□□ -1.91
SMCO3-201ENST00000316048 DAPL1A0PJW8 107 aa3.11□□□□□ -1.91
SMCO3-201ENST00000316048 OR6C70A6NIJ9 312 aa3.11□□□□□ -1.91
SMCO3-201ENST00000316048 IDSB3KWA1 339 aa3.11□□□□□ -1.91
SMCO3-201ENST00000316048 TMX2-CTNND1H3BSU7 103 aa3.11□□□□□ -1.91
SMCO3-201ENST00000316048 BHLHE40O14503 412 aa3.11□□□□□ -1.91
SMCO3-201ENST00000316048 SLC2A10O95528 541 aa3.11□□□□□ -1.91
SMCO3-201ENST00000316048 CT45A10P0DMU9 189 aa3.11□□□□□ -1.91
SMCO3-201ENST00000316048 PTNP21246 168 aa3.11□□□□□ -1.91
SMCO3-201ENST00000316048 CXCR1P25024 350 aa3.11□□□□□ -1.91
SMCO3-201ENST00000316048 SEC61GP60059 68 aa3.11□□□□□ -1.91
SMCO3-201ENST00000316048 MRPS15P82914 257 aaKnown RBP3.11□□□□□ -1.91
SMCO3-201ENST00000316048 EBPQ15125 230 aaKnown RBP3.11□□□□□ -1.91
SMCO3-201ENST00000316048 ISXQ2M1V0 245 aa3.11□□□□□ -1.91
SMCO3-201ENST00000316048 KLHL12Q53G59 568 aa3.11□□□□□ -1.91
SMCO3-201ENST00000316048 FAM199XQ6PEV8 388 aaPredicted RBP3.11□□□□□ -1.91
SMCO3-201ENST00000316048 MOB3BQ86TA1 216 aa3.11□□□□□ -1.91
SMCO3-201ENST00000316048 LHFPL3Q86UP9 236 aa3.11□□□□□ -1.91
SMCO3-201ENST00000316048 C9orf40Q8IXQ3 194 aa3.11□□□□□ -1.91
SMCO3-201ENST00000316048 LRRC75A-AS1Q8N1F1 130 aa3.11□□□□□ -1.91
SMCO3-201ENST00000316048 ACBD7Q8N6N7 88 aa3.11□□□□□ -1.91
SMCO3-201ENST00000316048 CSNK1G2-AS1Q8NCQ2 148 aa3.11□□□□□ -1.91
SMCO3-201ENST00000316048 AKR7LQ8NHP1 331 aa3.11□□□□□ -1.91
SMCO3-201ENST00000316048 NDNFQ8TB73 568 aa3.11□□□□□ -1.91
SMCO3-201ENST00000316048 SLC22A8Q8TCC7 542 aa3.11□□□□□ -1.91
SMCO3-201ENST00000316048 UFD1Q92890 307 aa3.11□□□□□ -1.91
SMCO3-201ENST00000316048 OPALINQ96PE5 141 aa3.11□□□□□ -1.91
SMCO3-201ENST00000316048 ERMAPQ96PL5 475 aaPredicted RBP3.11□□□□□ -1.91
SMCO3-201ENST00000316048 TEAD3Q99594 435 aa3.11□□□□□ -1.91
SMCO3-201ENST00000316048 TAPBPLQ9BX59 468 aa3.11□□□□□ -1.91
SMCO3-201ENST00000316048 OR51E2Q9H255 320 aa3.11□□□□□ -1.91
SMCO3-201ENST00000316048 FN3KRPQ9HA64 309 aa3.11□□□□□ -1.91
SMCO3-201ENST00000316048 EXOSC4Q9NPD3 245 aaKnown RBP3.11□□□□□ -1.91
SMCO3-201ENST00000316048 NANSQ9NR45 359 aa3.11□□□□□ -1.91
SMCO3-201ENST00000316048 FBXO8Q9NRD0 319 aa3.11□□□□□ -1.91
SMCO3-201ENST00000316048 INPP5EQ9NRR6 644 aa3.11□□□□□ -1.91
SMCO3-201ENST00000316048 NDUFB11Q9NX14 153 aa3.11□□□□□ -1.91
SMCO3-201ENST00000316048 CTSFQ9UBX1 484 aa3.11□□□□□ -1.91
SMCO3-201ENST00000316048 NXT1Q9UKK6 140 aaKnown RBP3.11□□□□□ -1.91
SMCO3-201ENST00000316048 RPH3ALQ9UNE2 315 aa3.11□□□□□ -1.91
SMCO3-201ENST00000316048 POLDIP2Q9Y2S7 368 aa3.11□□□□□ -1.91
SMCO3-201ENST00000316048 LSM2Q9Y333 95 aaKnown RBP3.11□□□□□ -1.91
SMCO3-201ENST00000316048 PEX16Q9Y5Y5 336 aa3.11□□□□□ -1.91
SMCO3-201ENST00000316048 NINQ8N4C6 2090 aa3.11□□□□□ -1.91
SMCO3-201ENST00000316048 REV3LO60673 3130 aa3.11□□□□□ -1.91
SMCO3-201ENST00000316048 RANBP2P49792 3224 aaKnown RBP3.11□□□□□ -1.91
SMCO3-201ENST00000316048 TRAV27A0A087WT01 109 aa3.11□□□□□ -1.91
SMCO3-201ENST00000316048 PNMA8CA0A1B0GUJ8 204 aa3.11□□□□□ -1.91
SMCO3-201ENST00000316048 SERTM2A0A1B0GWG4 89 aa3.11□□□□□ -1.91
SMCO3-201ENST00000316048 BTBD17A6NE02 478 aa3.11□□□□□ -1.91
SMCO3-201ENST00000316048 FAM183AA6NL82 134 aa3.11□□□□□ -1.91
SMCO3-201ENST00000316048 CDC40O60508 579 aaKnown RBP eCLIP3.11□□□□□ -1.91
SMCO3-201ENST00000316048 ICOSLGO75144 302 aa3.11□□□□□ -1.91
SMCO3-201ENST00000316048 GPX5O75715 221 aa3.11□□□□□ -1.91
SMCO3-201ENST00000316048 OR7A10O76100 309 aa3.11□□□□□ -1.91
SMCO3-201ENST00000316048 LDOC1O95751 146 aaPredicted RBP3.11□□□□□ -1.91
SMCO3-201ENST00000316048 IGHV3-13P01766 116 aa3.11□□□□□ -1.91
SMCO3-201ENST00000316048 GP1BAP07359 652 aa3.11□□□□□ -1.91
SMCO3-201ENST00000316048 SNRPCP09234 159 aaKnown RBP3.11□□□□□ -1.91
SMCO3-201ENST00000316048 LIMS3P0CW19 117 aa3.11□□□□□ -1.91
SMCO3-201ENST00000316048 LIMS4P0CW20 117 aa3.11□□□□□ -1.91
SMCO3-201ENST00000316048 HTR2BP41595 481 aa3.11□□□□□ -1.91
SMCO3-201ENST00000316048 TMED10P49755 219 aaKnown RBP3.11□□□□□ -1.91
SMCO3-201ENST00000316048 RORCP51449 518 aa3.11□□□□□ -1.91
SMCO3-201ENST00000316048 P2RX1P51575 399 aa3.11□□□□□ -1.91
SMCO3-201ENST00000316048 FXYD6P3P58550 94 aa3.11□□□□□ -1.91
SMCO3-201ENST00000316048 RND3P61587 244 aa3.11□□□□□ -1.91
SMCO3-201ENST00000316048 ACTC1P68032 377 aa3.11□□□□□ -1.91
SMCO3-201ENST00000316048 ACTA1P68133 377 aa3.11□□□□□ -1.91
SMCO3-201ENST00000316048 ZNF45Q02386 682 aa3.11□□□□□ -1.91
SMCO3-201ENST00000316048 SKP2Q13309 424 aa3.11□□□□□ -1.91
SMCO3-201ENST00000316048 TPBGQ13641 420 aa3.11□□□□□ -1.91
SMCO3-201ENST00000316048 PON3Q15166 354 aa3.11□□□□□ -1.91
SMCO3-201ENST00000316048 SSX1Q16384 188 aa3.11□□□□□ -1.91
SMCO3-201ENST00000316048 NDUFAF6Q330K2 333 aa3.11□□□□□ -1.91
SMCO3-201ENST00000316048 SHISA6Q6ZSJ9 500 aa3.11□□□□□ -1.91
SMCO3-201ENST00000316048 NCCRP1Q6ZVX7 275 aaPredicted RBP3.11□□□□□ -1.91
SMCO3-201ENST00000316048 MARCH3Q86UD3 253 aa3.11□□□□□ -1.91
SMCO3-201ENST00000316048 PRR22Q8IZ63 422 aa3.11□□□□□ -1.91
SMCO3-201ENST00000316048 KIR3DL3Q8N743 410 aa3.11□□□□□ -1.91
SMCO3-201ENST00000316048 GATSQ8NAP1 163 aa3.11□□□□□ -1.91
SMCO3-201ENST00000316048 OR4F15Q8NGB8 312 aa3.11□□□□□ -1.91
SMCO3-201ENST00000316048 OR52E2Q8NGJ4 325 aa3.11□□□□□ -1.91
SMCO3-201ENST00000316048 OR6Q1Q8NGQ2 317 aa3.11□□□□□ -1.91
SMCO3-201ENST00000316048 OR52N1Q8NH53 320 aa3.11□□□□□ -1.91
SMCO3-201ENST00000316048 NUBPLQ8TB37 319 aa3.11□□□□□ -1.91
SMCO3-201ENST00000316048 TMEM234Q8WY98 164 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms