RNA–Protein interactions for RNA: ENST00000228872.8

CDKN1B-201, Transcript of cyclin dependent kinase inhibitor 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN1B, Length 2,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1B-201ENST00000228872 GZMBP10144 247 aa15.43■□□□□ 0.06
CDKN1B-201ENST00000228872 ZNF43P17038 809 aa15.43■□□□□ 0.06
CDKN1B-201ENST00000228872 POU3F1Q03052 451 aaPredicted RBP15.43■□□□□ 0.06
CDKN1B-201ENST00000228872 PLPP5Q8NEB5 264 aa15.43■□□□□ 0.06
CDKN1B-201ENST00000228872 TOMM40LQ969M1 308 aa15.43■□□□□ 0.06
CDKN1B-201ENST00000228872 BOD1Q96IK1 185 aa15.43■□□□□ 0.06
CDKN1B-201ENST00000228872 HDHD3Q9BSH5 251 aaPredicted RBP15.43■□□□□ 0.06
CDKN1B-201ENST00000228872 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa15.43■□□□□ 0.06
CDKN1B-201ENST00000228872 TGOLN2O43493 480 aa15.43■□□□□ 0.06
CDKN1B-201ENST00000228872 CSNK1A1P48729 337 aa15.43■□□□□ 0.06
CDKN1B-201ENST00000228872 HLA-DRB3P79483 266 aa15.43■□□□□ 0.06
CDKN1B-201ENST00000228872 ZP4Q12836 540 aa15.43■□□□□ 0.06
CDKN1B-201ENST00000228872 C5orf24Q7Z6I8 188 aa15.43■□□□□ 0.06
CDKN1B-201ENST00000228872 ABCA7Q8IZY2 2146 aa15.43■□□□□ 0.06
CDKN1B-201ENST00000228872 LRTM2Q8N967 370 aa15.43■□□□□ 0.06
CDKN1B-201ENST00000228872 CA5BP1Q8WTZ4 195 aa15.43■□□□□ 0.06
CDKN1B-201ENST00000228872 PITPNC1Q9UKF7 332 aa15.43■□□□□ 0.06
CDKN1B-201ENST00000228872 TNRC6BQ9UPQ9 1833 aaKnown RBP15.43■□□□□ 0.06
CDKN1B-201ENST00000228872 CA11O75493 328 aa15.42■□□□□ 0.06
CDKN1B-201ENST00000228872 COX5BP10606 129 aa15.42■□□□□ 0.06
CDKN1B-201ENST00000228872 ZNF121P58317 390 aaPredicted RBP15.42■□□□□ 0.06
CDKN1B-201ENST00000228872 HSF1Q00613 529 aa15.42■□□□□ 0.06
CDKN1B-201ENST00000228872 RELQ04864 619 aaPredicted RBP15.42■□□□□ 0.06
CDKN1B-201ENST00000228872 CHCHD2P9Q5T1J5 151 aaPredicted RBP15.42■□□□□ 0.06
CDKN1B-201ENST00000228872 TSPO2Q5TGU0 170 aa15.42■□□□□ 0.06
CDKN1B-201ENST00000228872 CRIP3Q6Q6R5 217 aa15.42■□□□□ 0.06
CDKN1B-201ENST00000228872 LIAT1Q6ZQX7 453 aa15.42■□□□□ 0.06
CDKN1B-201ENST00000228872 BEND2Q8NDZ0 799 aa15.42■□□□□ 0.06
CDKN1B-201ENST00000228872 OR6X1Q8NH79 312 aa15.42■□□□□ 0.06
CDKN1B-201ENST00000228872 RTN4IP1Q8WWV3 396 aaPredicted RBP15.42■□□□□ 0.06
CDKN1B-201ENST00000228872 POM121Q96HA1 1249 aa15.42■□□□□ 0.06
CDKN1B-201ENST00000228872 VCANP13611 3396 aa15.42■□□□□ 0.06
CDKN1B-201ENST00000228872 CCDC187A0A096LP49 1063 aa15.42■□□□□ 0.06
CDKN1B-201ENST00000228872 MSTNO14793 375 aa15.42■□□□□ 0.06
CDKN1B-201ENST00000228872 SFTPDP35247 375 aa15.42■□□□□ 0.06
CDKN1B-201ENST00000228872 PPM1FP49593 454 aaPredicted RBP15.42■□□□□ 0.06
CDKN1B-201ENST00000228872 ZNF266Q14584 549 aa15.42■□□□□ 0.06
CDKN1B-201ENST00000228872 OGFOD3Q6PK18 319 aa15.42■□□□□ 0.06
CDKN1B-201ENST00000228872 C6orf201Q7Z4U5 140 aa15.42■□□□□ 0.06
CDKN1B-201ENST00000228872 FBXL14Q8N1E6 418 aa15.42■□□□□ 0.06
CDKN1B-201ENST00000228872 TM2D1Q9BX74 207 aa15.42■□□□□ 0.06
CDKN1B-201ENST00000228872 VN1R1Q9GZP7 353 aa15.42■□□□□ 0.06
CDKN1B-201ENST00000228872 LHFPL6Q9Y693 200 aa15.42■□□□□ 0.06
CDKN1B-201ENST00000228872 FAM230AA0A1W2PPH8 454 aa15.41■□□□□ 0.06
CDKN1B-201ENST00000228872 FAM24AA6NFZ4 105 aa15.41■□□□□ 0.06
CDKN1B-201ENST00000228872 EREGO14944 169 aa15.41■□□□□ 0.06
CDKN1B-201ENST00000228872 TSPAN2O60636 221 aa15.41■□□□□ 0.06
CDKN1B-201ENST00000228872 DBHP09172 617 aa15.41■□□□□ 0.06
CDKN1B-201ENST00000228872 ZNF728P0DKX0 622 aa15.41■□□□□ 0.06
CDKN1B-201ENST00000228872 TMEM225BP0DP42 221 aa15.41■□□□□ 0.06
CDKN1B-201ENST00000228872 FASLGP48023 281 aa15.41■□□□□ 0.06
CDKN1B-201ENST00000228872 RND2P52198 227 aa15.41■□□□□ 0.06
CDKN1B-201ENST00000228872 HNRNPKP61978 463 aaKnown RBP eCLIP15.41■□□□□ 0.06
CDKN1B-201ENST00000228872 PPA1Q15181 289 aa15.41■□□□□ 0.06
CDKN1B-201ENST00000228872 KISS1Q15726 138 aa15.41■□□□□ 0.06
CDKN1B-201ENST00000228872 ABCA11PQ4W5N1 156 aa15.41■□□□□ 0.06
CDKN1B-201ENST00000228872 OR14L1PQ8NHC6 308 aa15.41■□□□□ 0.06
CDKN1B-201ENST00000228872 LMX1AQ8TE12 382 aa15.41■□□□□ 0.06
CDKN1B-201ENST00000228872 NPRL2Q8WTW4 380 aa15.41■□□□□ 0.06
CDKN1B-201ENST00000228872 PCDH15Q96QU1 1955 aa15.41■□□□□ 0.06
CDKN1B-201ENST00000228872 B4DEV8 164 aa15.41■□□□□ 0.06
CDKN1B-201ENST00000228872 GLI4P10075 376 aa15.41■□□□□ 0.06
CDKN1B-201ENST00000228872 CCL1P22362 96 aa15.41■□□□□ 0.06
CDKN1B-201ENST00000228872 CLDND2Q8NHS1 167 aa15.41■□□□□ 0.06
CDKN1B-201ENST00000228872 RNASEH2CQ8TDP1 164 aaKnown RBP15.41■□□□□ 0.06
CDKN1B-201ENST00000228872 EMC6Q9BV81 110 aa15.41■□□□□ 0.06
CDKN1B-201ENST00000228872 DDA1Q9BW61 102 aa15.41■□□□□ 0.06
CDKN1B-201ENST00000228872 PPP1R14DQ9NXH3 145 aa15.41■□□□□ 0.06
CDKN1B-201ENST00000228872 ANXA10Q9UJ72 324 aa15.41■□□□□ 0.06
CDKN1B-201ENST00000228872 GEMIN2O14893 280 aaKnown RBP15.4■□□□□ 0.06
CDKN1B-201ENST00000228872 PITX3O75364 302 aa15.4■□□□□ 0.06
CDKN1B-201ENST00000228872 FUT3P21217 361 aa15.4■□□□□ 0.06
CDKN1B-201ENST00000228872 GNMTQ14749 295 aa15.4■□□□□ 0.06
CDKN1B-201ENST00000228872 ARL6IP1Q15041 203 aa15.4■□□□□ 0.06
CDKN1B-201ENST00000228872 RTL6Q6ICC9 239 aa15.4■□□□□ 0.06
CDKN1B-201ENST00000228872 H1FNTQ75WM6 255 aaPredicted RBP15.4■□□□□ 0.06
CDKN1B-201ENST00000228872 C17orf82Q86X59 251 aaPredicted RBP15.4■□□□□ 0.06
CDKN1B-201ENST00000228872 TMEM183AQ8IXX5 376 aa15.4■□□□□ 0.06
CDKN1B-201ENST00000228872 OR2C3Q8N628 320 aa15.4■□□□□ 0.06
CDKN1B-201ENST00000228872 SLC38A9Q8NBW4 561 aa15.4■□□□□ 0.06
CDKN1B-201ENST00000228872 OR4D5Q8NGN0 318 aa15.4■□□□□ 0.06
CDKN1B-201ENST00000228872 POLR1DQ9Y2S0 133 aa15.4■□□□□ 0.06
CDKN1B-201ENST00000228872 PHF3Q92576 2039 aaKnown RBP15.4■□□□□ 0.06
CDKN1B-201ENST00000228872 SPAG17Q6Q759 2223 aa15.4■□□□□ 0.06
CDKN1B-201ENST00000228872 IGSF23A1L1A6 192 aa15.4■□□□□ 0.06
CDKN1B-201ENST00000228872 STMND1H3BQB6 276 aa15.4■□□□□ 0.06
CDKN1B-201ENST00000228872 AMBPP02760 352 aa15.4■□□□□ 0.06
CDKN1B-201ENST00000228872 IGKV3-11P04433 115 aa15.4■□□□□ 0.06
CDKN1B-201ENST00000228872 ALDH3B1P43353 468 aa15.4■□□□□ 0.06
CDKN1B-201ENST00000228872 PLCXD2Q0VAA5 305 aa15.4■□□□□ 0.06
CDKN1B-201ENST00000228872 DOK3Q7L591 496 aa15.4■□□□□ 0.06
CDKN1B-201ENST00000228872 MSI2Q96DH6 328 aaKnown RBP15.4■□□□□ 0.06
CDKN1B-201ENST00000228872 GPR87Q9BY21 358 aa15.4■□□□□ 0.06
CDKN1B-201ENST00000228872 ACTR3CQ9C0K3 210 aaPredicted RBP15.4■□□□□ 0.06
CDKN1B-201ENST00000228872 C11orf1Q9H5F2 150 aa15.4■□□□□ 0.06
CDKN1B-201ENST00000228872 PCNX3Q9H6A9 2034 aa15.4■□□□□ 0.06
CDKN1B-201ENST00000228872 ZNF205O95201 554 aa15.4■□□□□ 0.06
CDKN1B-201ENST00000228872 BIDP55957 195 aa15.4■□□□□ 0.06
CDKN1B-201ENST00000228872 PHLDA2Q53GA4 152 aa15.4■□□□□ 0.06
CDKN1B-201ENST00000228872 ZNF721Q8TF20 911 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 116 ms