RNA–Protein interactions for RNA: ENSMUST00000003645.8

Ercc1-201, Transcript of DNA excision repair protein ERCC-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ercc1, Length 1,375 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc1-201ENSMUST00000003645 Sema6dQ76KF0 1073 aa12.64□□□□□ -0.39
Ercc1-201ENSMUST00000003645 HeltQ7TS99 240 aa12.64□□□□□ -0.39
Ercc1-201ENSMUST00000003645 Slc22a29Q8BWG6 551 aa12.64□□□□□ -0.39
Ercc1-201ENSMUST00000003645 Trmt6Q8CE96 497 aa12.64□□□□□ -0.39
Ercc1-201ENSMUST00000003645 Klf17Q8CFA7 341 aa12.64□□□□□ -0.39
Ercc1-201ENSMUST00000003645 Nsun5Q8K4F6 465 aaKnown RBP12.64□□□□□ -0.39
Ercc1-201ENSMUST00000003645 Cuedc1Q8R3V6 388 aa12.64□□□□□ -0.39
Ercc1-201ENSMUST00000003645 Olfr1217Q8VGG1 304 aa12.64□□□□□ -0.39
Ercc1-201ENSMUST00000003645 Olfr796Q8VGJ1 310 aa12.64□□□□□ -0.39
Ercc1-201ENSMUST00000003645 Gtf3aQ8VHT7 364 aa12.64□□□□□ -0.39
Ercc1-201ENSMUST00000003645 Cd209dQ91ZW8 237 aa12.64□□□□□ -0.39
Ercc1-201ENSMUST00000003645 Slc35b3Q922Q5 369 aa12.64□□□□□ -0.39
Ercc1-201ENSMUST00000003645 Mrpl54Q9CPW3 135 aa12.64□□□□□ -0.39
Ercc1-201ENSMUST00000003645 Jam3Q9D8B7 310 aa12.64□□□□□ -0.39
Ercc1-201ENSMUST00000003645 Tinf2Q9QXG9 341 aa12.64□□□□□ -0.39
Ercc1-201ENSMUST00000003645 Ighv6-6A0A075B5T3 119 aa12.63□□□□□ -0.39
Ercc1-201ENSMUST00000003645 Smok4aA0JLX3 433 aa12.63□□□□□ -0.39
Ercc1-201ENSMUST00000003645 Gm6890A2BG94 208 aa12.63□□□□□ -0.39
Ercc1-201ENSMUST00000003645 Gm8225D3Z536 292 aa12.63□□□□□ -0.39
Ercc1-201ENSMUST00000003645 Krt83E9Q1Y9 479 aa12.63□□□□□ -0.39
Ercc1-201ENSMUST00000003645 PspnO70300 156 aa12.63□□□□□ -0.39
Ercc1-201ENSMUST00000003645 Agr2O88312 175 aa12.63□□□□□ -0.39
Ercc1-201ENSMUST00000003645 ApelaP0DMC4 54 aa12.63□□□□□ -0.39
Ercc1-201ENSMUST00000003645 Agtr1aP29754 359 aa12.63□□□□□ -0.39
Ercc1-201ENSMUST00000003645 Barhl1P63157 327 aa12.63□□□□□ -0.39
Ercc1-201ENSMUST00000003645 Ear2P97425 156 aa12.63□□□□□ -0.39
Ercc1-201ENSMUST00000003645 Pax8Q00288 457 aa12.63□□□□□ -0.39
Ercc1-201ENSMUST00000003645 Gm6760Q0ZNK3 87 aa12.63□□□□□ -0.39
Ercc1-201ENSMUST00000003645 Defb20Q30KP3 96 aa12.63□□□□□ -0.39
Ercc1-201ENSMUST00000003645 Gm10912Q3UXH0 145 aa12.63□□□□□ -0.39
Ercc1-201ENSMUST00000003645 Spock1Q62288 442 aa12.63□□□□□ -0.39
Ercc1-201ENSMUST00000003645 Slc25a44Q8BGF9 314 aa12.63□□□□□ -0.39
Ercc1-201ENSMUST00000003645 D330020A13RikQ8C799 211 aa12.63□□□□□ -0.39
Ercc1-201ENSMUST00000003645 Vmn1r21Q8R2C6 297 aa12.63□□□□□ -0.39
Ercc1-201ENSMUST00000003645 Olfr164Q8VF87 315 aa12.63□□□□□ -0.39
Ercc1-201ENSMUST00000003645 Chchd6Q91VN4 273 aa12.63□□□□□ -0.39
Ercc1-201ENSMUST00000003645 Txndc17Q9CQM5 123 aa12.63□□□□□ -0.39
Ercc1-201ENSMUST00000003645 Plpp6Q9D4F2 292 aa12.63□□□□□ -0.39
Ercc1-201ENSMUST00000003645 Vmn1r171Q9EPS6 316 aa12.63□□□□□ -0.39
Ercc1-201ENSMUST00000003645 Uchl1Q9R0P9 223 aa12.63□□□□□ -0.39
Ercc1-201ENSMUST00000003645 Slurp1Q9Z0K7 110 aa12.63□□□□□ -0.39
Ercc1-201ENSMUST00000003645 Flg2Q2VIS4 2362 aa12.62□□□□□ -0.39
Ercc1-201ENSMUST00000003645 Ighv5-4A0A075B5P9 117 aa12.62□□□□□ -0.39
Ercc1-201ENSMUST00000003645 Siglec15A7E1W8 342 aa12.62□□□□□ -0.39
Ercc1-201ENSMUST00000003645 Prdm13E9PZZ1 754 aa12.62□□□□□ -0.39
Ercc1-201ENSMUST00000003645 Vmn2r66K7N6R9 851 aa12.62□□□□□ -0.39
Ercc1-201ENSMUST00000003645 Gm8050L7N2E3 205 aa12.62□□□□□ -0.39
Ercc1-201ENSMUST00000003645 Klk1b3P00756 261 aa12.62□□□□□ -0.39
Ercc1-201ENSMUST00000003645 P18526 117 aa12.62□□□□□ -0.39
Ercc1-201ENSMUST00000003645 Tnfsf10P50592 291 aa12.62□□□□□ -0.39
Ercc1-201ENSMUST00000003645 Atp5j2P56135 88 aaKnown RBP12.62□□□□□ -0.39
Ercc1-201ENSMUST00000003645 Rac2Q05144 192 aa12.62□□□□□ -0.39
Ercc1-201ENSMUST00000003645 Cd96Q3U0X8 602 aa12.62□□□□□ -0.39
Ercc1-201ENSMUST00000003645 Tbrg1Q3UB74 406 aa12.62□□□□□ -0.39
Ercc1-201ENSMUST00000003645 Bloc1s3Q5U5M8 195 aa12.62□□□□□ -0.39
Ercc1-201ENSMUST00000003645 Coq8aQ60936 645 aa12.62□□□□□ -0.39
Ercc1-201ENSMUST00000003645 Dtx1Q61010 627 aa12.62□□□□□ -0.39
Ercc1-201ENSMUST00000003645 Zfp874bQ7M6X2 447 aa12.62□□□□□ -0.39
Ercc1-201ENSMUST00000003645 Olfr1162Q7TR28 314 aa12.62□□□□□ -0.39
Ercc1-201ENSMUST00000003645 Olfr1101Q7TR59 310 aa12.62□□□□□ -0.39
Ercc1-201ENSMUST00000003645 Sez6Q7TSK2 991 aa12.62□□□□□ -0.39
Ercc1-201ENSMUST00000003645 JkampQ8BI36 311 aa12.62□□□□□ -0.39
Ercc1-201ENSMUST00000003645 Srrm4Q8BKA3 608 aa12.62□□□□□ -0.39
Ercc1-201ENSMUST00000003645 Zfp3Q8BLB0 497 aa12.62□□□□□ -0.39
Ercc1-201ENSMUST00000003645 Tgm4Q8BZH1 670 aa12.62□□□□□ -0.39
Ercc1-201ENSMUST00000003645 Anapc10Q8K2H6 185 aa12.62□□□□□ -0.39
Ercc1-201ENSMUST00000003645 Vmn1r233Q8R294 319 aa12.62□□□□□ -0.39
Ercc1-201ENSMUST00000003645 Vmn1r51Q8VIC6 319 aa12.62□□□□□ -0.39
Ercc1-201ENSMUST00000003645 Scgb3a1Q920D7 104 aa12.62□□□□□ -0.39
Ercc1-201ENSMUST00000003645 Ranbp3Q9CT10 491 aa12.62□□□□□ -0.39
Ercc1-201ENSMUST00000003645 Raet1eQ9CZQ6 251 aa12.62□□□□□ -0.39
Ercc1-201ENSMUST00000003645 Stpg1Q9D2F5 341 aa12.62□□□□□ -0.39
Ercc1-201ENSMUST00000003645 Exosc8Q9D753 276 aaKnown RBP12.62□□□□□ -0.39
Ercc1-201ENSMUST00000003645 Cmtm2aQ9DAR1 169 aa12.62□□□□□ -0.39
Ercc1-201ENSMUST00000003645 AspdhQ9DCQ2 287 aa12.62□□□□□ -0.39
Ercc1-201ENSMUST00000003645 Gk2Q9WU65 554 aa12.62□□□□□ -0.39
Ercc1-201ENSMUST00000003645 Syngr4Q9Z1L2 233 aa12.62□□□□□ -0.39
Ercc1-201ENSMUST00000003645 Gm3667K7N757 205 aa12.61□□□□□ -0.39
Ercc1-201ENSMUST00000003645 CaskO70589 926 aa12.61□□□□□ -0.39
Ercc1-201ENSMUST00000003645 Hnf1aP22361 628 aa12.61□□□□□ -0.39
Ercc1-201ENSMUST00000003645 Agtr1bP29755 359 aa12.61□□□□□ -0.39
Ercc1-201ENSMUST00000003645 ErfP70459 551 aa12.61□□□□□ -0.39
Ercc1-201ENSMUST00000003645 Prop1P97458 223 aa12.61□□□□□ -0.39
Ercc1-201ENSMUST00000003645 Gdf3Q07104 366 aa12.61□□□□□ -0.39
Ercc1-201ENSMUST00000003645 Rtp3Q5QGU6 474 aa12.61□□□□□ -0.39
Ercc1-201ENSMUST00000003645 Fam181bQ80VF6 417 aa12.61□□□□□ -0.39
Ercc1-201ENSMUST00000003645 Stk17bQ8BG48 372 aa12.61□□□□□ -0.39
Ercc1-201ENSMUST00000003645 Lhfpl2Q8BGA2 222 aa12.61□□□□□ -0.39
Ercc1-201ENSMUST00000003645 Gtdc1Q8BW56 445 aa12.61□□□□□ -0.39
Ercc1-201ENSMUST00000003645 Olfr307Q8VFN8 313 aa12.61□□□□□ -0.39
Ercc1-201ENSMUST00000003645 Olfr1240Q8VG73 314 aa12.61□□□□□ -0.39
Ercc1-201ENSMUST00000003645 Gpr37Q9QY42 600 aa12.61□□□□□ -0.39
Ercc1-201ENSMUST00000003645 Sptbn2Q68FG2 2388 aa12.6□□□□□ -0.39
Ercc1-201ENSMUST00000003645 Gm45844A0A1B0GRQ2 137 aa12.6□□□□□ -0.39
Ercc1-201ENSMUST00000003645 Olfr287E9PZS7 322 aa12.6□□□□□ -0.39
Ercc1-201ENSMUST00000003645 Gm21783J3QM57 227 aa12.6□□□□□ -0.39
Ercc1-201ENSMUST00000003645 Cxcl13O55038 109 aa12.6□□□□□ -0.39
Ercc1-201ENSMUST00000003645 Rce1P57791 329 aa12.6□□□□□ -0.39
Ercc1-201ENSMUST00000003645 Fitm2P59266 262 aa12.6□□□□□ -0.39
Ercc1-201ENSMUST00000003645 Rsu1Q01730 277 aa12.6□□□□□ -0.39
Retrieved 100 of 22,080 RNA–protein pairs in 68 ms