RNA–Protein interactions for RNA: ENST00000640957.1

SCARB2-227, Transcript of scavenger receptor class B member 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCARB2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-227ENST00000640957 LCN15Q6UWW0 184 aa12.06□□□□□ -0.48
SCARB2-227ENST00000640957 WWTR1Q9GZV5 400 aa12.06□□□□□ -0.48
SCARB2-227ENST00000640957 POLE3Q9NRF9 147 aa12.06□□□□□ -0.48
SCARB2-227ENST00000640957 OSGIN2Q9Y236 505 aa12.06□□□□□ -0.48
SCARB2-227ENST00000640957 A0A1B0GUS0 222 aa12.06□□□□□ -0.48
SCARB2-227ENST00000640957 TMEM14DPA8MWL7 114 aa12.06□□□□□ -0.48
SCARB2-227ENST00000640957 HSD17B6O14756 317 aa12.06□□□□□ -0.48
SCARB2-227ENST00000640957 IFNA10P01566 189 aa12.06□□□□□ -0.48
SCARB2-227ENST00000640957 GP1BBP13224 206 aa12.06□□□□□ -0.48
SCARB2-227ENST00000640957 MMP16P51512 607 aa12.06□□□□□ -0.48
SCARB2-227ENST00000640957 BIDP55957 195 aa12.06□□□□□ -0.48
SCARB2-227ENST00000640957 SPCS3P61009 180 aa12.06□□□□□ -0.48
SCARB2-227ENST00000640957 TMEM37Q8WXS4 190 aa12.06□□□□□ -0.48
SCARB2-227ENST00000640957 OR10A2Q9H208 303 aa12.06□□□□□ -0.48
SCARB2-227ENST00000640957 TXNIPQ9H3M7 391 aa12.06□□□□□ -0.48
SCARB2-227ENST00000640957 PLEKHJ1Q9NW61 149 aa12.06□□□□□ -0.48
SCARB2-227ENST00000640957 BPNT1O95861 308 aa12.05□□□□□ -0.48
SCARB2-227ENST00000640957 OR4A8P0C604 315 aa12.05□□□□□ -0.48
SCARB2-227ENST00000640957 FSTP19883 344 aa12.05□□□□□ -0.48
SCARB2-227ENST00000640957 ALDH3B1P43353 468 aa12.05□□□□□ -0.48
SCARB2-227ENST00000640957 ERVS71-1P61550 626 aa12.05□□□□□ -0.48
SCARB2-227ENST00000640957 DTX1Q86Y01 620 aa12.05□□□□□ -0.48
SCARB2-227ENST00000640957 NKAIN3Q8N8D7 197 aa12.05□□□□□ -0.48
SCARB2-227ENST00000640957 ZNF248Q8NDW4 579 aa12.05□□□□□ -0.48
SCARB2-227ENST00000640957 OR10S1Q8NGN2 331 aa12.05□□□□□ -0.48
SCARB2-227ENST00000640957 SLC39A7Q92504 469 aa12.05□□□□□ -0.48
SCARB2-227ENST00000640957 CPNE4Q96A23 557 aaPredicted RBP12.05□□□□□ -0.48
SCARB2-227ENST00000640957 NIPSNAP3BQ9BS92 247 aa12.05□□□□□ -0.48
SCARB2-227ENST00000640957 FOXD3Q9UJU5 478 aaPredicted RBP12.05□□□□□ -0.48
SCARB2-227ENST00000640957 TRAV36DV7A0A075B6V5 113 aa12.05□□□□□ -0.48
SCARB2-227ENST00000640957 PHF1O43189 567 aaPredicted RBP12.05□□□□□ -0.48
SCARB2-227ENST00000640957 SSSCA1O60232 199 aa12.05□□□□□ -0.48
SCARB2-227ENST00000640957 FAHP16930 419 aa12.05□□□□□ -0.48
SCARB2-227ENST00000640957 PGCP20142 388 aa12.05□□□□□ -0.48
SCARB2-227ENST00000640957 IZUMO4Q1ZYL8 232 aa12.05□□□□□ -0.48
SCARB2-227ENST00000640957 FDX2Q6P4F2 183 aa12.05□□□□□ -0.48
SCARB2-227ENST00000640957 TMEM68Q96MH6 324 aa12.05□□□□□ -0.48
SCARB2-227ENST00000640957 S1PR5Q9H228 398 aa12.05□□□□□ -0.48
SCARB2-227ENST00000640957 AURKAIP1Q9NWT8 199 aaPredicted RBP12.05□□□□□ -0.48
SCARB2-227ENST00000640957 SPRY1O43609 319 aaPredicted RBP12.05□□□□□ -0.48
SCARB2-227ENST00000640957 ZNF121P58317 390 aaPredicted RBP12.05□□□□□ -0.48
SCARB2-227ENST00000640957 P2RY6Q15077 328 aa12.05□□□□□ -0.48
SCARB2-227ENST00000640957 NCR3LG1Q68D85 454 aa12.05□□□□□ -0.48
SCARB2-227ENST00000640957 LYPD6Q86Y78 171 aa12.05□□□□□ -0.48
SCARB2-227ENST00000640957 OR5AS1Q8N127 324 aa12.05□□□□□ -0.48
SCARB2-227ENST00000640957 ZNF519Q8TB69 540 aa12.05□□□□□ -0.48
SCARB2-227ENST00000640957 RTN4IP1Q8WWV3 396 aaPredicted RBP12.05□□□□□ -0.48
SCARB2-227ENST00000640957 SLC25A31Q9H0C2 315 aa12.05□□□□□ -0.48
SCARB2-227ENST00000640957 KCNIP3Q9Y2W7 256 aa12.05□□□□□ -0.48
SCARB2-227ENST00000640957 NSG1A0A0A6YYJ2 146 aa12.04□□□□□ -0.48
SCARB2-227ENST00000640957 GZMBP10144 247 aa12.04□□□□□ -0.48
SCARB2-227ENST00000640957 FCGR2AP12318 317 aa12.04□□□□□ -0.48
SCARB2-227ENST00000640957 GABRG2P18507 467 aa12.04□□□□□ -0.48
SCARB2-227ENST00000640957 EPHA1P21709 976 aa12.04□□□□□ -0.48
SCARB2-227ENST00000640957 RPL29P47914 159 aaKnown RBP12.04□□□□□ -0.48
SCARB2-227ENST00000640957 EMC4Q5J8M3 183 aa12.04□□□□□ -0.48
SCARB2-227ENST00000640957 SLC22A18ASQ8N1D0 253 aa12.04□□□□□ -0.48
SCARB2-227ENST00000640957 ZNF283Q8N7M2 679 aa12.04□□□□□ -0.48
SCARB2-227ENST00000640957 OR2AJ1Q8NGZ0 328 aa12.04□□□□□ -0.48
SCARB2-227ENST00000640957 FAM206AQ9NX38 181 aa12.04□□□□□ -0.48
SCARB2-227ENST00000640957 DCAF16Q9NXF7 216 aa12.04□□□□□ -0.48
SCARB2-227ENST00000640957 IGKV1-9A0A0C4DH69 117 aa12.04□□□□□ -0.48
SCARB2-227ENST00000640957 PLPP3O14495 311 aa12.04□□□□□ -0.48
SCARB2-227ENST00000640957 SRSF10O75494 262 aaKnown RBP12.04□□□□□ -0.48
SCARB2-227ENST00000640957 BMP5P22003 454 aa12.04□□□□□ -0.48
SCARB2-227ENST00000640957 PCP4P48539 62 aa12.04□□□□□ -0.48
SCARB2-227ENST00000640957 LANCL3Q6ZV70 420 aa12.04□□□□□ -0.48
SCARB2-227ENST00000640957 OR8B12Q8NGG6 310 aa12.04□□□□□ -0.48
SCARB2-227ENST00000640957 GPBAR1Q8TDU6 330 aa12.04□□□□□ -0.48
SCARB2-227ENST00000640957 YPEL4Q96NS1 127 aa12.04□□□□□ -0.48
SCARB2-227ENST00000640957 SIRT7Q9NRC8 400 aa12.04□□□□□ -0.48
SCARB2-227ENST00000640957 LOC390937A0A1W2PQ73 354 aa12.03□□□□□ -0.48
SCARB2-227ENST00000640957 A6NIZ1 184 aa12.03□□□□□ -0.48
SCARB2-227ENST00000640957 LYL1P12980 280 aa12.03□□□□□ -0.48
SCARB2-227ENST00000640957 TNFRSF4P43489 277 aa12.03□□□□□ -0.48
SCARB2-227ENST00000640957 P2RY1P47900 373 aa12.03□□□□□ -0.48
SCARB2-227ENST00000640957 RAP1BP61224 184 aa12.03□□□□□ -0.48
SCARB2-227ENST00000640957 FZD2Q14332 565 aa12.03□□□□□ -0.48
SCARB2-227ENST00000640957 TOMM20Q15388 145 aa12.03□□□□□ -0.48
SCARB2-227ENST00000640957 NSDHLQ15738 373 aa12.03□□□□□ -0.48
SCARB2-227ENST00000640957 KCNG3Q8TAE7 436 aa12.03□□□□□ -0.48
SCARB2-227ENST00000640957 MALSU1Q96EH3 234 aa12.03□□□□□ -0.48
SCARB2-227ENST00000640957 DDA1Q9BW61 102 aa12.03□□□□□ -0.48
SCARB2-227ENST00000640957 MRPL37Q9BZE1 423 aaKnown RBP12.03□□□□□ -0.48
SCARB2-227ENST00000640957 CLDN16Q9Y5I7 305 aa12.03□□□□□ -0.48
SCARB2-227ENST00000640957 NCOA6Q14686 2063 aaPredicted RBP12.03□□□□□ -0.48
SCARB2-227ENST00000640957 CCDC187A0A096LP49 1063 aa12.03□□□□□ -0.48
SCARB2-227ENST00000640957 TMEM150CB9EJG8 249 aa12.03□□□□□ -0.48
SCARB2-227ENST00000640957 PMELP40967 661 aa12.03□□□□□ -0.48
SCARB2-227ENST00000640957 SLC25A24Q6NUK1 477 aa12.03□□□□□ -0.48
SCARB2-227ENST00000640957 EMG1Q92979 244 aaKnown RBP12.03□□□□□ -0.48
SCARB2-227ENST00000640957 C1orf147Q96MC9 270 aaPredicted RBP12.03□□□□□ -0.48
SCARB2-227ENST00000640957 BCO1Q9HAY6 547 aa12.03□□□□□ -0.48
SCARB2-227ENST00000640957 MUC3AQ02505 3323 aa12.03□□□□□ -0.48
SCARB2-227ENST00000640957 C5orf67F2Z3F1 127 aa12.03□□□□□ -0.48
SCARB2-227ENST00000640957 PTBP3O95758 552 aaKnown RBP12.03□□□□□ -0.48
SCARB2-227ENST00000640957 MBP02144 154 aa12.03□□□□□ -0.48
SCARB2-227ENST00000640957 SRP19P09132 144 aaKnown RBP12.03□□□□□ -0.48
SCARB2-227ENST00000640957 WNT5AP41221 380 aa12.03□□□□□ -0.48
SCARB2-227ENST00000640957 TLE3Q04726 772 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms