RNA–Protein interactions for RNA: ENST00000635152.1

BRF1-222, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 2

Gene BRF1, Length 2,876 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-222ENST00000635152 FOXJ2Q9P0K8 574 aa11.35□□□□□ -0.59
BRF1-222ENST00000635152 FCGR3AP08637 254 aa11.34□□□□□ -0.59
BRF1-222ENST00000635152 EDN3P14138 238 aa11.34□□□□□ -0.59
BRF1-222ENST00000635152 FOXG1P55316 489 aaPredicted RBP11.34□□□□□ -0.59
BRF1-222ENST00000635152 GFRA1P56159 465 aa11.34□□□□□ -0.59
BRF1-222ENST00000635152 PHLDA2Q53GA4 152 aa11.34□□□□□ -0.59
BRF1-222ENST00000635152 IGSF11Q5DX21 431 aa11.34□□□□□ -0.59
BRF1-222ENST00000635152 LHFPL2Q6ZUX7 228 aa11.34□□□□□ -0.59
BRF1-222ENST00000635152 CALHM1Q8IU99 346 aa11.34□□□□□ -0.59
BRF1-222ENST00000635152 OSR2Q8N2R0 312 aa11.34□□□□□ -0.59
BRF1-222ENST00000635152 CPNE4Q96A23 557 aaPredicted RBP11.34□□□□□ -0.59
BRF1-222ENST00000635152 LDAHQ9H6V9 325 aa11.34□□□□□ -0.59
BRF1-222ENST00000635152 CALHM2Q9HA72 323 aa11.34□□□□□ -0.59
BRF1-222ENST00000635152 PLA2G3Q9NZ20 509 aa11.34□□□□□ -0.59
BRF1-222ENST00000635152 SLC7A11Q9UPY5 501 aa11.34□□□□□ -0.59
BRF1-222ENST00000635152 hCG_38984A0A1B0GV85 526 aa11.34□□□□□ -0.59
BRF1-222ENST00000635152 OR7C1O76099 320 aaPredicted RBP11.34□□□□□ -0.59
BRF1-222ENST00000635152 FARS2O95363 451 aaKnown RBP11.34□□□□□ -0.59
BRF1-222ENST00000635152 CHATP28329 748 aa11.34□□□□□ -0.59
BRF1-222ENST00000635152 ZNF273Q14593 569 aa11.34□□□□□ -0.59
BRF1-222ENST00000635152 RTL6Q6ICC9 239 aa11.34□□□□□ -0.59
BRF1-222ENST00000635152 OR2A2Q6IF42 318 aa11.34□□□□□ -0.59
BRF1-222ENST00000635152 SLC22A25Q6T423 547 aa11.34□□□□□ -0.59
BRF1-222ENST00000635152 LINC00696Q6ZRV3 163 aa11.34□□□□□ -0.59
BRF1-222ENST00000635152 STOML3Q8TAV4 291 aa11.34□□□□□ -0.59
BRF1-222ENST00000635152 MRPL24Q96A35 216 aaKnown RBP11.34□□□□□ -0.59
BRF1-222ENST00000635152 PIGMQ9H3S5 423 aa11.34□□□□□ -0.59
BRF1-222ENST00000635152 TMEM231Q9H6L2 316 aa11.34□□□□□ -0.59
BRF1-222ENST00000635152 SLC7A10Q9NS82 523 aa11.34□□□□□ -0.59
BRF1-222ENST00000635152 BDP1A6H8Y1 2624 aa11.34□□□□□ -0.59
BRF1-222ENST00000635152 PCSK5Q92824 1860 aa11.34□□□□□ -0.59
BRF1-222ENST00000635152 C9orf172C9J069 976 aa11.34□□□□□ -0.59
BRF1-222ENST00000635152 ACTL6AO96019 429 aa11.34□□□□□ -0.59
BRF1-222ENST00000635152 RCC1P18754 421 aaPredicted RBP11.34□□□□□ -0.59
BRF1-222ENST00000635152 NPBWR2P48146 333 aa11.34□□□□□ -0.59
BRF1-222ENST00000635152 SRSF3P84103 164 aaKnown RBP11.34□□□□□ -0.59
BRF1-222ENST00000635152 PDZK1IP1Q13113 114 aa11.34□□□□□ -0.59
BRF1-222ENST00000635152 SURF2Q15527 256 aaPredicted RBP11.34□□□□□ -0.59
BRF1-222ENST00000635152 PLEKHN1Q494U1 663 aaPredicted RBP11.34□□□□□ -0.59
BRF1-222ENST00000635152 CDCP2Q5VXM1 449 aa11.34□□□□□ -0.59
BRF1-222ENST00000635152 H3F3CQ6NXT2 135 aa11.34□□□□□ -0.59
BRF1-222ENST00000635152 CLEC9AQ6UXN8 241 aa11.34□□□□□ -0.59
BRF1-222ENST00000635152 CCDC54Q8NEL0 328 aa11.34□□□□□ -0.59
BRF1-222ENST00000635152 SLC30A7Q8NEW0 376 aa11.34□□□□□ -0.59
BRF1-222ENST00000635152 FNDC9Q8TBE3 224 aa11.34□□□□□ -0.59
BRF1-222ENST00000635152 USB1Q9BQ65 265 aaKnown RBP11.34□□□□□ -0.59
BRF1-222ENST00000635152 SMIM3Q9BZL3 60 aa11.34□□□□□ -0.59
BRF1-222ENST00000635152 LSM5Q9Y4Y9 91 aaKnown RBP11.34□□□□□ -0.59
BRF1-222ENST00000635152 ZNF705EA8MWA4 302 aaPredicted RBP11.33□□□□□ -0.6
BRF1-222ENST00000635152 CYTIPO60759 359 aa11.33□□□□□ -0.6
BRF1-222ENST00000635152 HLA-HP01893 362 aa11.33□□□□□ -0.6
BRF1-222ENST00000635152 MPLP40238 635 aa11.33□□□□□ -0.6
BRF1-222ENST00000635152 PCBD1P61457 104 aa11.33□□□□□ -0.6
BRF1-222ENST00000635152 PPA1Q15181 289 aa11.33□□□□□ -0.6
BRF1-222ENST00000635152 ABCA11PQ4W5N1 156 aa11.33□□□□□ -0.6
BRF1-222ENST00000635152 RPL7L1Q6DKI1 246 aaKnown RBP11.33□□□□□ -0.6
BRF1-222ENST00000635152 SLC25A26Q70HW3 274 aa11.33□□□□□ -0.6
BRF1-222ENST00000635152 TUSC5Q8IXB3 177 aa11.33□□□□□ -0.6
BRF1-222ENST00000635152 RNF141Q8WVD5 230 aa11.33□□□□□ -0.6
BRF1-222ENST00000635152 CPNE2Q96FN4 548 aaPredicted RBP11.33□□□□□ -0.6
BRF1-222ENST00000635152 STRADBQ9C0K7 418 aa11.33□□□□□ -0.6
BRF1-222ENST00000635152 NECAP2Q9NVZ3 263 aa11.33□□□□□ -0.6
BRF1-222ENST00000635152 MED13Q9UHV7 2174 aa11.33□□□□□ -0.6
BRF1-222ENST00000635152 NEURL1O76050 574 aa11.33□□□□□ -0.6
BRF1-222ENST00000635152 PET100P0DJ07 73 aa11.33□□□□□ -0.6
BRF1-222ENST00000635152 ITGA3P26006 1051 aa11.33□□□□□ -0.6
BRF1-222ENST00000635152 FCGR2CP31995 323 aa11.33□□□□□ -0.6
BRF1-222ENST00000635152 MAGEA5P43359 124 aa11.33□□□□□ -0.6
BRF1-222ENST00000635152 ARF1P84077 181 aaKnown RBP11.33□□□□□ -0.6
BRF1-222ENST00000635152 RIPPLY2Q5TAB7 128 aa11.33□□□□□ -0.6
BRF1-222ENST00000635152 GGNBP1Q5YKI7 109 aa11.33□□□□□ -0.6
BRF1-222ENST00000635152 C5orf24Q7Z6I8 188 aa11.33□□□□□ -0.6
BRF1-222ENST00000635152 ZNF611Q8N823 705 aa11.33□□□□□ -0.6
BRF1-222ENST00000635152 PAPOLGQ9BWT3 736 aaKnown RBP11.33□□□□□ -0.6
BRF1-222ENST00000635152 HRH4Q9H3N8 390 aa11.33□□□□□ -0.6
BRF1-222ENST00000635152 ZNF442Q9H7R0 627 aa11.33□□□□□ -0.6
BRF1-222ENST00000635152 ZNF629Q9UEG4 869 aaPredicted RBP11.33□□□□□ -0.6
BRF1-222ENST00000635152 GLS2Q9UI32 602 aa11.33□□□□□ -0.6
BRF1-222ENST00000635152 BOKQ9UMX3 212 aaPredicted RBP11.33□□□□□ -0.6
BRF1-222ENST00000635152 MEMO1Q9Y316 297 aa11.33□□□□□ -0.6
BRF1-222ENST00000635152 FBXO24O75426 580 aa11.32□□□□□ -0.6
BRF1-222ENST00000635152 CA11O75493 328 aa11.32□□□□□ -0.6
BRF1-222ENST00000635152 CTSDP07339 412 aaPredicted RBP11.32□□□□□ -0.6
BRF1-222ENST00000635152 MMP7P09237 267 aaPredicted RBP11.32□□□□□ -0.6
BRF1-222ENST00000635152 OR5AC1P0C628 307 aa11.32□□□□□ -0.6
BRF1-222ENST00000635152 ZNF728P0DKX0 622 aa11.32□□□□□ -0.6
BRF1-222ENST00000635152 ZNF708P17019 499 aa11.32□□□□□ -0.6
BRF1-222ENST00000635152 FUT6P51993 359 aa11.32□□□□□ -0.6
BRF1-222ENST00000635152 IL15RAQ13261 267 aa11.32□□□□□ -0.6
BRF1-222ENST00000635152 C3AR1Q16581 482 aa11.32□□□□□ -0.6
BRF1-222ENST00000635152 ABHD17BQ5VST6 288 aa11.32□□□□□ -0.6
BRF1-222ENST00000635152 TMEM42Q69YG0 159 aa11.32□□□□□ -0.6
BRF1-222ENST00000635152 CCDC36Q8IYA8 594 aa11.32□□□□□ -0.6
BRF1-222ENST00000635152 OR2M7Q8NG81 312 aa11.32□□□□□ -0.6
BRF1-222ENST00000635152 OR5T2Q8NGG2 359 aa11.32□□□□□ -0.6
BRF1-222ENST00000635152 OR5L1Q8NGL2 311 aa11.32□□□□□ -0.6
BRF1-222ENST00000635152 RTN4IP1Q8WWV3 396 aaPredicted RBP11.32□□□□□ -0.6
BRF1-222ENST00000635152 AQP10Q96PS8 301 aa11.32□□□□□ -0.6
BRF1-222ENST00000635152 TAAR9Q96RI9 348 aa11.32□□□□□ -0.6
BRF1-222ENST00000635152 ADAT1Q9BUB4 502 aaKnown RBP11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms