RNA–Protein interactions for RNA: ENST00000625664.2

USP8-219, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 5 BASIC

Gene USP8, Length 1,568 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-219ENST00000625664 ATPAF1Q5TC12 328 aaPredicted RBP10.41□□□□□ -0.74
USP8-219ENST00000625664 OR2G6Q5TZ20 316 aa10.41□□□□□ -0.74
USP8-219ENST00000625664 ZNF788Q6ZQV5 615 aa10.41□□□□□ -0.74
USP8-219ENST00000625664 Q6ZSR3 168 aa10.41□□□□□ -0.74
USP8-219ENST00000625664 C9orf139Q6ZV77 190 aa10.41□□□□□ -0.74
USP8-219ENST00000625664 CROCCP3Q8IVE0 287 aa10.41□□□□□ -0.74
USP8-219ENST00000625664 BATF2Q8N1L9 274 aa10.41□□□□□ -0.74
USP8-219ENST00000625664 PRSS35Q8N3Z0 413 aa10.41□□□□□ -0.74
USP8-219ENST00000625664 MCFD2Q8NI22 146 aa10.41□□□□□ -0.74
USP8-219ENST00000625664 TRMT10AQ8TBZ6 339 aaKnown RBP10.41□□□□□ -0.74
USP8-219ENST00000625664 NPRL2Q8WTW4 380 aa10.41□□□□□ -0.74
USP8-219ENST00000625664 H1FXQ92522 213 aaKnown RBP10.41□□□□□ -0.74
USP8-219ENST00000625664 C1orf147Q96MC9 270 aaPredicted RBP10.41□□□□□ -0.74
USP8-219ENST00000625664 MND1Q9BWT6 205 aa10.41□□□□□ -0.74
USP8-219ENST00000625664 SIRPDQ9H106 197 aa10.41□□□□□ -0.74
USP8-219ENST00000625664 PLEKHA1Q9HB21 404 aa10.41□□□□□ -0.74
USP8-219ENST00000625664 LOC107986453A0A1B0GWG9 222 aa10.4□□□□□ -0.74
USP8-219ENST00000625664 DAPL1A0PJW8 107 aa10.4□□□□□ -0.74
USP8-219ENST00000625664 DHRS7CA6NNS2 312 aa10.4□□□□□ -0.74
USP8-219ENST00000625664 J3QT63 122 aa10.4□□□□□ -0.74
USP8-219ENST00000625664 MAGEB3O15480 346 aa10.4□□□□□ -0.74
USP8-219ENST00000625664 LIMS3P0CW19 117 aa10.4□□□□□ -0.74
USP8-219ENST00000625664 LIMS4P0CW20 117 aa10.4□□□□□ -0.74
USP8-219ENST00000625664 PSG2P11465 335 aa10.4□□□□□ -0.74
USP8-219ENST00000625664 PRTN3P24158 256 aa10.4□□□□□ -0.74
USP8-219ENST00000625664 KIR3DL2P43630 455 aa10.4□□□□□ -0.74
USP8-219ENST00000625664 ACTC1P68032 377 aa10.4□□□□□ -0.74
USP8-219ENST00000625664 ACTA1P68133 377 aa10.4□□□□□ -0.74
USP8-219ENST00000625664 RAB40BQ12829 278 aa10.4□□□□□ -0.74
USP8-219ENST00000625664 ZNF846Q147U1 533 aa10.4□□□□□ -0.74
USP8-219ENST00000625664 DEFB112Q30KQ8 113 aa10.4□□□□□ -0.74
USP8-219ENST00000625664 ZNF573Q86YE8 665 aa10.4□□□□□ -0.74
USP8-219ENST00000625664 PDZD9Q8IXQ8 264 aa10.4□□□□□ -0.74
USP8-219ENST00000625664 LHX4Q969G2 390 aa10.4□□□□□ -0.74
USP8-219ENST00000625664 RNF166Q96A37 237 aaPredicted RBP10.4□□□□□ -0.74
USP8-219ENST00000625664 DNTTIP1Q9H147 329 aa10.4□□□□□ -0.74
USP8-219ENST00000625664 CNTD2Q9H8S5 307 aa10.4□□□□□ -0.74
USP8-219ENST00000625664 ONECUT1Q9UBC0 465 aa10.4□□□□□ -0.74
USP8-219ENST00000625664 SLC25A10Q9UBX3 287 aaPredicted RBP10.4□□□□□ -0.74
USP8-219ENST00000625664 IGKV1D-17A0A075B6S4 117 aa10.39□□□□□ -0.75
USP8-219ENST00000625664 CENPVL3A0A0U1RRI6 287 aa10.39□□□□□ -0.75
USP8-219ENST00000625664 FAM230AA0A1W2PPH8 454 aa10.39□□□□□ -0.75
USP8-219ENST00000625664 PQLC2LA1A4F0 135 aa10.39□□□□□ -0.75
USP8-219ENST00000625664 ANKRD61A6NGH8 418 aa10.39□□□□□ -0.75
USP8-219ENST00000625664 J3QRE1 110 aa10.39□□□□□ -0.75
USP8-219ENST00000625664 MYL12BO14950 172 aa10.39□□□□□ -0.75
USP8-219ENST00000625664 SIGLEC5O15389 551 aa10.39□□□□□ -0.75
USP8-219ENST00000625664 ACAA1P09110 424 aaPredicted RBP10.39□□□□□ -0.75
USP8-219ENST00000625664 NDUFB7P17568 137 aa10.39□□□□□ -0.75
USP8-219ENST00000625664 OR12D2P58182 307 aa10.39□□□□□ -0.75
USP8-219ENST00000625664 C11orf91Q3C1V1 193 aa10.39□□□□□ -0.75
USP8-219ENST00000625664 CDONQ4KMG0 1287 aa10.39□□□□□ -0.75
USP8-219ENST00000625664 C16orf87Q6PH81 154 aa10.39□□□□□ -0.75
USP8-219ENST00000625664 ACP7Q6ZNF0 438 aa10.39□□□□□ -0.75
USP8-219ENST00000625664 SNX29P2Q8IUI4 249 aa10.39□□□□□ -0.75
USP8-219ENST00000625664 RDH10Q8IZV5 341 aa10.39□□□□□ -0.75
USP8-219ENST00000625664 ACBD7Q8N6N7 88 aa10.39□□□□□ -0.75
USP8-219ENST00000625664 POC1AQ8NBT0 407 aa10.39□□□□□ -0.75
USP8-219ENST00000625664 LY6G5BQ8NDX9 201 aa10.39□□□□□ -0.75
USP8-219ENST00000625664 TMEM185AQ8NFB2 350 aa10.39□□□□□ -0.75
USP8-219ENST00000625664 OR2G2Q8NGZ5 317 aa10.39□□□□□ -0.75
USP8-219ENST00000625664 ZDHHC16Q969W1 377 aa10.39□□□□□ -0.75
USP8-219ENST00000625664 MED30Q96HR3 178 aa10.39□□□□□ -0.75
USP8-219ENST00000625664 DCTN5Q9BTE1 182 aa10.39□□□□□ -0.75
USP8-219ENST00000625664 ELL3Q9HB65 397 aaPredicted RBP10.39□□□□□ -0.75
USP8-219ENST00000625664 ZNF222Q9UK12 451 aa10.39□□□□□ -0.75
USP8-219ENST00000625664 TMEM89A2RUT3 159 aa10.39□□□□□ -0.75
USP8-219ENST00000625664 SNTNA6NMZ2 147 aa10.39□□□□□ -0.75
USP8-219ENST00000625664 J3QLW9 94 aa10.39□□□□□ -0.75
USP8-219ENST00000625664 GPR37O15354 613 aa10.39□□□□□ -0.75
USP8-219ENST00000625664 ZNF19P17023 458 aa10.39□□□□□ -0.75
USP8-219ENST00000625664 PRB3Q04118 309 aaPredicted RBP10.39□□□□□ -0.75
USP8-219ENST00000625664 MLLT11Q13015 90 aaPredicted RBP10.39□□□□□ -0.75
USP8-219ENST00000625664 PDCD1Q15116 288 aa10.39□□□□□ -0.75
USP8-219ENST00000625664 UBE2V2Q15819 145 aa10.39□□□□□ -0.75
USP8-219ENST00000625664 SMIM21Q3B7S5 101 aa10.39□□□□□ -0.75
USP8-219ENST00000625664 LIPKQ5VXJ0 399 aa10.39□□□□□ -0.75
USP8-219ENST00000625664 Q6ZNX1 250 aa10.39□□□□□ -0.75
USP8-219ENST00000625664 VMO1Q7Z5L0 202 aa10.39□□□□□ -0.75
USP8-219ENST00000625664 LHFPL3Q86UP9 236 aa10.39□□□□□ -0.75
USP8-219ENST00000625664 ANGPTL5Q86XS5 388 aa10.39□□□□□ -0.75
USP8-219ENST00000625664 CALHM1Q8IU99 346 aa10.39□□□□□ -0.75
USP8-219ENST00000625664 ZNRF1Q8ND25 227 aa10.39□□□□□ -0.75
USP8-219ENST00000625664 GATAD2BQ8WXI9 593 aa10.39□□□□□ -0.75
USP8-219ENST00000625664 ZNF649Q9BS31 505 aa10.39□□□□□ -0.75
USP8-219ENST00000625664 NXF2Q9GZY0 626 aaKnown RBP10.39□□□□□ -0.75
USP8-219ENST00000625664 EXOSC4Q9NPD3 245 aaKnown RBP10.39□□□□□ -0.75
USP8-219ENST00000625664 SIRT7Q9NRC8 400 aa10.39□□□□□ -0.75
USP8-219ENST00000625664 CCDC59Q9P031 241 aaKnown RBP10.39□□□□□ -0.75
USP8-219ENST00000625664 SLC7A11Q9UPY5 501 aa10.39□□□□□ -0.75
USP8-219ENST00000625664 EXOGQ9Y2C4 368 aaKnown RBP10.39□□□□□ -0.75
USP8-219ENST00000625664 EXOSC1Q9Y3B2 195 aaKnown RBP10.39□□□□□ -0.75
USP8-219ENST00000625664 MAB21L2Q9Y586 359 aa10.39□□□□□ -0.75
USP8-219ENST00000625664 KPTNQ9Y664 436 aa10.39□□□□□ -0.75
USP8-219ENST00000625664 IGHV1-69DA0A0B4J2H0 117 aa10.38□□□□□ -0.75
USP8-219ENST00000625664 PNMA8CA0A1B0GUJ8 204 aa10.38□□□□□ -0.75
USP8-219ENST00000625664 IRGMA1A4Y4 181 aa10.38□□□□□ -0.75
USP8-219ENST00000625664 RFPL4AA6NLU0 287 aa10.38□□□□□ -0.75
USP8-219ENST00000625664 RFPL4AL1F8VTS6 287 aa10.38□□□□□ -0.75
USP8-219ENST00000625664 NXPH2O95156 264 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 101.1 ms