RNA–Protein interactions for RNA: ENST00000622702.1

PDLIM2-221, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5 BASIC

Gene PDLIM2, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-221ENST00000622702 CLDN12P56749 244 aa16.64■□□□□ 0.25
PDLIM2-221ENST00000622702 DSCR9P59020 149 aa16.64■□□□□ 0.25
PDLIM2-221ENST00000622702 P2RY14Q15391 338 aa16.64■□□□□ 0.25
PDLIM2-221ENST00000622702 SLC22A6Q4U2R8 563 aa16.64■□□□□ 0.25
PDLIM2-221ENST00000622702 FAM90A1Q86YD7 464 aa16.64■□□□□ 0.25
PDLIM2-221ENST00000622702 CIARTQ8N365 385 aaPredicted RBP16.64■□□□□ 0.25
PDLIM2-221ENST00000622702 MRI1Q9BV20 369 aa16.64■□□□□ 0.25
PDLIM2-221ENST00000622702 WDR13Q9H1Z4 485 aa16.64■□□□□ 0.25
PDLIM2-221ENST00000622702 LIN7BQ9HAP6 207 aa16.64■□□□□ 0.25
PDLIM2-221ENST00000622702 RBFOX1Q9NWB1 397 aaKnown RBP16.64■□□□□ 0.25
PDLIM2-221ENST00000622702 FBLN5Q9UBX5 448 aa16.64■□□□□ 0.25
PDLIM2-221ENST00000622702 ACANP16112 2415 aa16.63■□□□□ 0.25
PDLIM2-221ENST00000622702 PPIAL4EA0A075B759 164 aa16.63■□□□□ 0.25
PDLIM2-221ENST00000622702 PPIAL4DF5H284 164 aa16.63■□□□□ 0.25
PDLIM2-221ENST00000622702 WNT9BO14905 357 aa16.63■□□□□ 0.25
PDLIM2-221ENST00000622702 PPIAL4FP0DN26 164 aa16.63■□□□□ 0.25
PDLIM2-221ENST00000622702 SCAND1P57086 179 aa16.63■□□□□ 0.25
PDLIM2-221ENST00000622702 FGF12P61328 243 aa16.63■□□□□ 0.25
PDLIM2-221ENST00000622702 QRFPP83859 136 aa16.63■□□□□ 0.25
PDLIM2-221ENST00000622702 HOXA4Q00056 320 aaPredicted RBP16.63■□□□□ 0.25
PDLIM2-221ENST00000622702 CARTPTQ16568 116 aa16.63■□□□□ 0.25
PDLIM2-221ENST00000622702 SMIM21Q3B7S5 101 aa16.63■□□□□ 0.25
PDLIM2-221ENST00000622702 FAM201AQ5SY85 155 aa16.63■□□□□ 0.25
PDLIM2-221ENST00000622702 TEX36Q5VZQ5 186 aa16.63■□□□□ 0.25
PDLIM2-221ENST00000622702 ACP7Q6ZNF0 438 aa16.63■□□□□ 0.25
PDLIM2-221ENST00000622702 LURAP1LQ8IV03 231 aa16.63■□□□□ 0.25
PDLIM2-221ENST00000622702 BOLLQ8N9W6 283 aaKnown RBP16.63■□□□□ 0.25
PDLIM2-221ENST00000622702 OR51D1Q8NGF3 324 aa16.63■□□□□ 0.25
PDLIM2-221ENST00000622702 OR10K1Q8NGX5 313 aa16.63■□□□□ 0.25
PDLIM2-221ENST00000622702 FAM168AQ92567 244 aa16.63■□□□□ 0.25
PDLIM2-221ENST00000622702 KCTD12Q96CX2 325 aaKnown RBP16.63■□□□□ 0.25
PDLIM2-221ENST00000622702 CST11Q9H112 138 aa16.63■□□□□ 0.25
PDLIM2-221ENST00000622702 HMG20AQ9NP66 347 aa16.63■□□□□ 0.25
PDLIM2-221ENST00000622702 CCDC59Q9P031 241 aaKnown RBP16.63■□□□□ 0.25
PDLIM2-221ENST00000622702 PPIAL4AQ9Y536 164 aa16.63■□□□□ 0.25
PDLIM2-221ENST00000622702 MED13LQ71F56 2210 aa16.62■□□□□ 0.25
PDLIM2-221ENST00000622702 IGHV4-30-2A0A087WSY4 118 aa16.62■□□□□ 0.25
PDLIM2-221ENST00000622702 LGALS8O00214 317 aa16.62■□□□□ 0.25
PDLIM2-221ENST00000622702 NDUFS8O00217 210 aa16.62■□□□□ 0.25
PDLIM2-221ENST00000622702 LDLRAD4O15165 306 aa16.62■□□□□ 0.25
PDLIM2-221ENST00000622702 CSTBP04080 98 aaKnown RBP16.62■□□□□ 0.25
PDLIM2-221ENST00000622702 VSIG8P0DPA2 414 aa16.62■□□□□ 0.25
PDLIM2-221ENST00000622702 CALCBP10092 127 aa16.62■□□□□ 0.25
PDLIM2-221ENST00000622702 CD80P33681 288 aa16.62■□□□□ 0.25
PDLIM2-221ENST00000622702 IDNKQ5T6J7 187 aa16.62■□□□□ 0.25
PDLIM2-221ENST00000622702 OR2W3Q7Z3T1 314 aa16.62■□□□□ 0.25
PDLIM2-221ENST00000622702 PEG10Q86TG7 708 aaKnown RBP16.62■□□□□ 0.25
PDLIM2-221ENST00000622702 FAM58AQ8N1B3 248 aa16.62■□□□□ 0.25
PDLIM2-221ENST00000622702 RAB1CQ92928 201 aa16.62■□□□□ 0.25
PDLIM2-221ENST00000622702 EMG1Q92979 244 aaKnown RBP16.62■□□□□ 0.25
PDLIM2-221ENST00000622702 MRPS24Q96EL2 167 aaKnown RBP16.62■□□□□ 0.25
PDLIM2-221ENST00000622702 TIMD4Q96H15 378 aa16.62■□□□□ 0.25
PDLIM2-221ENST00000622702 ABRACLQ9P1F3 81 aa16.62■□□□□ 0.25
PDLIM2-221ENST00000622702 OOEPA6NGQ2 149 aa16.61■□□□□ 0.25
PDLIM2-221ENST00000622702 TMEM14DPA8MWL7 114 aa16.61■□□□□ 0.25
PDLIM2-221ENST00000622702 RNF223E7ERA6 249 aa16.61■□□□□ 0.25
PDLIM2-221ENST00000622702 PPIHO43447 177 aaKnown RBP16.61■□□□□ 0.25
PDLIM2-221ENST00000622702 HTR3BO95264 441 aa16.61■□□□□ 0.25
PDLIM2-221ENST00000622702 GTF2F2P13984 249 aa16.61■□□□□ 0.25
PDLIM2-221ENST00000622702 MUC1P15941 1255 aaPredicted RBP16.61■□□□□ 0.25
PDLIM2-221ENST00000622702 ZNF182P17025 639 aaPredicted RBP16.61■□□□□ 0.25
PDLIM2-221ENST00000622702 SERPINA2P20848 420 aa16.61■□□□□ 0.25
PDLIM2-221ENST00000622702 SOX6P35712 828 aa16.61■□□□□ 0.25
PDLIM2-221ENST00000622702 GMFBP60983 142 aa16.61■□□□□ 0.25
PDLIM2-221ENST00000622702 BTG1P62324 171 aa16.61■□□□□ 0.25
PDLIM2-221ENST00000622702 DYNC1I2Q13409 638 aaKnown RBP16.61■□□□□ 0.25
PDLIM2-221ENST00000622702 C2orf76Q3KRA6 126 aa16.61■□□□□ 0.25
PDLIM2-221ENST00000622702 NHLRC3Q5JS37 347 aa16.61■□□□□ 0.25
PDLIM2-221ENST00000622702 BATF2Q8N1L9 274 aa16.61■□□□□ 0.25
PDLIM2-221ENST00000622702 TMEM104Q8NE00 496 aa16.61■□□□□ 0.25
PDLIM2-221ENST00000622702 OR51T1Q8NGJ9 327 aa16.61■□□□□ 0.25
PDLIM2-221ENST00000622702 KCNG3Q8TAE7 436 aa16.61■□□□□ 0.25
PDLIM2-221ENST00000622702 C10orf105Q8TEF2 133 aa16.61■□□□□ 0.25
PDLIM2-221ENST00000622702 SEH1LQ96EE3 360 aa16.61■□□□□ 0.25
PDLIM2-221ENST00000622702 C18orf12Q96KH6 178 aa16.61■□□□□ 0.25
PDLIM2-221ENST00000622702 WIPI2Q9Y4P8 454 aa16.61■□□□□ 0.25
PDLIM2-221ENST00000622702 TEP1Q99973 2627 aaKnown RBP16.61■□□□□ 0.25
PDLIM2-221ENST00000622702 A0A0B4J203 849 aa16.61■□□□□ 0.25
PDLIM2-221ENST00000622702 TRAV38-1A0A0B4J264 116 aa16.61■□□□□ 0.25
PDLIM2-221ENST00000622702 A0A1W2PP11 408 aa16.61■□□□□ 0.25
PDLIM2-221ENST00000622702 C3orf80F5H4A9 247 aa16.61■□□□□ 0.25
PDLIM2-221ENST00000622702 SMAD7O15105 426 aaKnown RBP16.61■□□□□ 0.25
PDLIM2-221ENST00000622702 KNG1P01042 644 aa16.61■□□□□ 0.25
PDLIM2-221ENST00000622702 IGHV2-70P01814 119 aa16.61■□□□□ 0.25
PDLIM2-221ENST00000622702 PRKACAP17612 351 aa16.61■□□□□ 0.25
PDLIM2-221ENST00000622702 GPR6P46095 362 aaPredicted RBP16.61■□□□□ 0.25
PDLIM2-221ENST00000622702 UNC119Q13432 240 aa16.61■□□□□ 0.25
PDLIM2-221ENST00000622702 ZMYND11Q15326 602 aa16.61■□□□□ 0.25
PDLIM2-221ENST00000622702 MICBQ29980 383 aa16.61■□□□□ 0.25
PDLIM2-221ENST00000622702 OSR2Q8N2R0 312 aa16.61■□□□□ 0.25
PDLIM2-221ENST00000622702 REG4Q9BYZ8 158 aa16.61■□□□□ 0.25
PDLIM2-221ENST00000622702 NLKQ9UBE8 527 aa16.61■□□□□ 0.25
PDLIM2-221ENST00000622702 DNAJB11Q9UBS4 358 aa16.61■□□□□ 0.25
PDLIM2-221ENST00000622702 OR5V1Q9UGF6 321 aa16.61■□□□□ 0.25
PDLIM2-221ENST00000622702 CRTAPO75718 401 aaPredicted RBP16.6■□□□□ 0.25
PDLIM2-221ENST00000622702 ZNF205O95201 554 aa16.6■□□□□ 0.25
PDLIM2-221ENST00000622702 PAHP00439 452 aa16.6■□□□□ 0.25
PDLIM2-221ENST00000622702 SNRPBP14678 240 aaKnown RBP16.6■□□□□ 0.25
PDLIM2-221ENST00000622702 FOSL1P15407 271 aa16.6■□□□□ 0.25
PDLIM2-221ENST00000622702 MGMTP16455 207 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms