RNA–Protein interactions for RNA: ENST00000602557.5

CSMD1-216, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 11,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-216ENST00000602557 LDLRAD3Q86YD5 345 aa7.81□□□□□ -1.16
CSMD1-216ENST00000602557 CISD2Q8N5K1 135 aaKnown RBP7.81□□□□□ -1.16
CSMD1-216ENST00000602557 C11orf40Q8WZ69 217 aa7.81□□□□□ -1.16
CSMD1-216ENST00000602557 TOX2Q96NM4 488 aa7.81□□□□□ -1.16
CSMD1-216ENST00000602557 TMEM140Q9NV12 185 aa7.81□□□□□ -1.16
CSMD1-216ENST00000602557 MRPS2Q9Y399 296 aaKnown RBP7.81□□□□□ -1.16
CSMD1-216ENST00000602557 M0R135 149 aa7.81□□□□□ -1.16
CSMD1-216ENST00000602557 CAMPP49913 170 aa7.81□□□□□ -1.16
CSMD1-216ENST00000602557 ZNF124Q15973 351 aa7.81□□□□□ -1.16
CSMD1-216ENST00000602557 ZNF799Q96GE5 643 aa7.81□□□□□ -1.16
CSMD1-216ENST00000602557 MBD1Q9UIS9 605 aaPredicted RBP7.81□□□□□ -1.16
CSMD1-216ENST00000602557 TNFSF11O14788 317 aa7.81□□□□□ -1.16
CSMD1-216ENST00000602557 FAM157BP0CG42 384 aa7.81□□□□□ -1.16
CSMD1-216ENST00000602557 SELEP16581 610 aa7.81□□□□□ -1.16
CSMD1-216ENST00000602557 BOD1Q96IK1 185 aa7.81□□□□□ -1.16
CSMD1-216ENST00000602557 A0A1W2PNR3 127 aa7.8□□□□□ -1.16
CSMD1-216ENST00000602557 DUSP2Q05923 314 aa7.8□□□□□ -1.16
CSMD1-216ENST00000602557 C16orf52Q8NHV5 167 aa7.8□□□□□ -1.16
CSMD1-216ENST00000602557 SDF2Q99470 211 aa7.8□□□□□ -1.16
CSMD1-216ENST00000602557 C6orf106Q9H6K1 298 aaPredicted RBP7.8□□□□□ -1.16
CSMD1-216ENST00000602557 KIAA1456Q9P272 454 aa7.8□□□□□ -1.16
CSMD1-216ENST00000602557 TRAV1-2A0A0B4J238 106 aa7.8□□□□□ -1.16
CSMD1-216ENST00000602557 TMPRSS11DO60235 418 aa7.8□□□□□ -1.16
CSMD1-216ENST00000602557 F11P03951 625 aa7.8□□□□□ -1.16
CSMD1-216ENST00000602557 SSBP1Q04837 148 aaKnown RBP7.8□□□□□ -1.16
CSMD1-216ENST00000602557 SPINK9Q5DT21 86 aa7.8□□□□□ -1.16
CSMD1-216ENST00000602557 PARM1Q6UWI2 310 aa7.8□□□□□ -1.16
CSMD1-216ENST00000602557 DAPP1Q9UN19 280 aa7.8□□□□□ -1.16
CSMD1-216ENST00000602557 RGPD3A6NKT7 1758 aaPredicted RBP7.8□□□□□ -1.16
CSMD1-216ENST00000602557 IGHV3-15A0A0B4J1V0 119 aa7.8□□□□□ -1.16
CSMD1-216ENST00000602557 IDSB3KWA1 339 aa7.8□□□□□ -1.16
CSMD1-216ENST00000602557 ADAM20O43506 726 aa7.8□□□□□ -1.16
CSMD1-216ENST00000602557 IFITM3Q01628 133 aa7.8□□□□□ -1.16
CSMD1-216ENST00000602557 PAX5Q02548 391 aa7.8□□□□□ -1.16
CSMD1-216ENST00000602557 HLA-BQ31612 363 aa7.8□□□□□ -1.16
CSMD1-216ENST00000602557 VWA2Q5GFL6 755 aa7.8□□□□□ -1.16
CSMD1-216ENST00000602557 SLC26A10Q8NG04 563 aa7.8□□□□□ -1.16
CSMD1-216ENST00000602557 PATE1Q8WXA2 126 aa7.8□□□□□ -1.16
CSMD1-216ENST00000602557 FGF22Q9HCT0 170 aa7.8□□□□□ -1.16
CSMD1-216ENST00000602557 NAT8Q9UHE5 227 aa7.8□□□□□ -1.16
CSMD1-216ENST00000602557 CXCL2P19875 107 aa7.8□□□□□ -1.16
CSMD1-216ENST00000602557 FAM3AP98173 230 aa7.8□□□□□ -1.16
CSMD1-216ENST00000602557 MBNL1Q9NR56 388 aaKnown RBP7.8□□□□□ -1.16
CSMD1-216ENST00000602557 CMC2Q9NRP2 79 aa7.8□□□□□ -1.16
CSMD1-216ENST00000602557 TNRC6CQ9HCJ0 1690 aaKnown RBP7.8□□□□□ -1.16
CSMD1-216ENST00000602557 PCNX2A6NKB5 2137 aa7.8□□□□□ -1.16
CSMD1-216ENST00000602557 TRGC2P03986 189 aa7.8□□□□□ -1.16
CSMD1-216ENST00000602557 GCSHP23434 173 aa7.8□□□□□ -1.16
CSMD1-216ENST00000602557 ZXDAP98168 799 aa7.8□□□□□ -1.16
CSMD1-216ENST00000602557 ZADH2Q8N4Q0 377 aa7.8□□□□□ -1.16
CSMD1-216ENST00000602557 VN1R2Q8NFZ6 395 aa7.8□□□□□ -1.16
CSMD1-216ENST00000602557 OR5M9Q8NGP3 310 aa7.8□□□□□ -1.16
CSMD1-216ENST00000602557 MASP2O00187 686 aa7.8□□□□□ -1.16
CSMD1-216ENST00000602557 COX7A2P2O60397 106 aa7.8□□□□□ -1.16
CSMD1-216ENST00000602557 EIF4E2O60573 245 aaKnown RBP7.8□□□□□ -1.16
CSMD1-216ENST00000602557 KLK2P20151 261 aa7.8□□□□□ -1.16
CSMD1-216ENST00000602557 FER1L6-AS2Q96M78 137 aa7.8□□□□□ -1.16
CSMD1-216ENST00000602557 ALKBH7Q9BT30 221 aaPredicted RBP7.8□□□□□ -1.16
CSMD1-216ENST00000602557 ISLRO14498 428 aa7.8□□□□□ -1.16
CSMD1-216ENST00000602557 ATP6V1FQ16864 119 aa7.8□□□□□ -1.16
CSMD1-216ENST00000602557 TMEM52BQ4KMG9 183 aa7.8□□□□□ -1.16
CSMD1-216ENST00000602557 OR10P1Q8NGE3 313 aa7.8□□□□□ -1.16
CSMD1-216ENST00000602557 CRYAAP02489 173 aa7.8□□□□□ -1.16
CSMD1-216ENST00000602557 ADAT3Q96EY9 351 aaPredicted RBP7.8□□□□□ -1.16
CSMD1-216ENST00000602557 MS4A4AQ96JQ5 239 aa7.8□□□□□ -1.16
CSMD1-216ENST00000602557 TMEM191AQ9H0A3 160 aa7.8□□□□□ -1.16
CSMD1-216ENST00000602557 SLCO1C1Q9NYB5 712 aa7.8□□□□□ -1.16
CSMD1-216ENST00000602557 FABP2P12104 132 aa7.8□□□□□ -1.16
CSMD1-216ENST00000602557 CTSSP25774 331 aa7.8□□□□□ -1.16
CSMD1-216ENST00000602557 EMC4Q5J8M3 183 aa7.8□□□□□ -1.16
CSMD1-216ENST00000602557 MUC15Q8N387 334 aa7.8□□□□□ -1.16
CSMD1-216ENST00000602557 PRSS3P2Q8NHM4 247 aa7.8□□□□□ -1.16
CSMD1-216ENST00000602557 FAM131CQ96AQ9 280 aa7.8□□□□□ -1.16
CSMD1-216ENST00000602557 MRPL13Q9BYD1 178 aaKnown RBP7.8□□□□□ -1.16
CSMD1-216ENST00000602557 TET1Q8NFU7 2136 aa7.8□□□□□ -1.16
CSMD1-216ENST00000602557 PATJQ8NI35 1801 aa7.8□□□□□ -1.16
CSMD1-216ENST00000602557 CA2P00918 260 aa7.79□□□□□ -1.16
CSMD1-216ENST00000602557 HPXP02790 462 aa7.79□□□□□ -1.16
CSMD1-216ENST00000602557 LYRM7Q5U5X0 104 aa7.79□□□□□ -1.16
CSMD1-216ENST00000602557 TIMD4Q96H15 378 aa7.79□□□□□ -1.16
CSMD1-216ENST00000602557 PECRQ9BY49 303 aa7.79□□□□□ -1.16
CSMD1-216ENST00000602557 CA10Q9NS85 328 aa7.79□□□□□ -1.16
CSMD1-216ENST00000602557 TIMM10BQ9Y5J6 103 aa7.79□□□□□ -1.16
CSMD1-216ENST00000602557 GABRA1P14867 456 aa7.79□□□□□ -1.16
CSMD1-216ENST00000602557 CD81P60033 236 aa7.79□□□□□ -1.16
CSMD1-216ENST00000602557 SSX8Q7RTT4 187 aa7.79□□□□□ -1.16
CSMD1-216ENST00000602557 PUSL1Q8N0Z8 303 aaKnown RBP7.79□□□□□ -1.16
CSMD1-216ENST00000602557 PRSS50Q9UI38 385 aa7.79□□□□□ -1.16
CSMD1-216ENST00000602557 ZNF346Q9UL40 294 aaKnown RBP7.79□□□□□ -1.16
CSMD1-216ENST00000602557 TCRBV5S1A1TA0A578 114 aa7.79□□□□□ -1.16
CSMD1-216ENST00000602557 ABLIM3O94929 683 aa7.79□□□□□ -1.16
CSMD1-216ENST00000602557 TAS2R45P59539 299 aa7.79□□□□□ -1.16
CSMD1-216ENST00000602557 CTAG1AP78358 180 aa7.79□□□□□ -1.16
CSMD1-216ENST00000602557 GAMTQ14353 236 aa7.79□□□□□ -1.16
CSMD1-216ENST00000602557 C6orf15Q6UXA7 325 aaPredicted RBP7.79□□□□□ -1.16
CSMD1-216ENST00000602557 LHFPL2Q6ZUX7 228 aa7.79□□□□□ -1.16
CSMD1-216ENST00000602557 IGHA1P01876 353 aa7.79□□□□□ -1.16
CSMD1-216ENST00000602557 CTXN2P0C2S0 81 aa7.79□□□□□ -1.16
CSMD1-216ENST00000602557 CD27P26842 260 aa7.79□□□□□ -1.16
CSMD1-216ENST00000602557 DRAM2Q6UX65 266 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 99.7 ms