RNA–Protein interactions for RNA: ENST00000589901.2

MBD3-206, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 2

Gene MBD3, Length 740 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-206ENST00000589901 ODF4Q2M2E3 257 aa13.16□□□□□ -0.3
MBD3-206ENST00000589901 LDLRAD2Q5SZI1 272 aa13.16□□□□□ -0.3
MBD3-206ENST00000589901 LIAT1Q6ZQX7 453 aa13.16□□□□□ -0.3
MBD3-206ENST00000589901 SSX6Q7RTT6 188 aa13.16□□□□□ -0.3
MBD3-206ENST00000589901 ASCC1Q8N9N2 400 aaKnown RBP13.16□□□□□ -0.3
MBD3-206ENST00000589901 TRMT10AQ8TBZ6 339 aaKnown RBP13.16□□□□□ -0.3
MBD3-206ENST00000589901 SERTAD4Q9NUC0 356 aa13.16□□□□□ -0.3
MBD3-206ENST00000589901 CLN6Q9NWW5 311 aa13.16□□□□□ -0.3
MBD3-206ENST00000589901 SNX5Q9Y5X3 404 aa13.16□□□□□ -0.3
MBD3-206ENST00000589901 FAM230AA0A1W2PPH8 454 aa13.15□□□□□ -0.3
MBD3-206ENST00000589901 SNTNA6NMZ2 147 aa13.15□□□□□ -0.3
MBD3-206ENST00000589901 ZNF737O75373 536 aa13.15□□□□□ -0.3
MBD3-206ENST00000589901 RPP14O95059 124 aaKnown RBP13.15□□□□□ -0.3
MBD3-206ENST00000589901 ARG1P05089 322 aa13.15□□□□□ -0.3
MBD3-206ENST00000589901 FAM189A2Q15884 450 aa13.15□□□□□ -0.3
MBD3-206ENST00000589901 NSUN5P1Q3KNT7 163 aa13.15□□□□□ -0.3
MBD3-206ENST00000589901 KPRPQ5T749 579 aaPredicted RBP13.15□□□□□ -0.3
MBD3-206ENST00000589901 C12orf73Q69YU5 71 aa13.15□□□□□ -0.3
MBD3-206ENST00000589901 Q6ZSR3 168 aa13.15□□□□□ -0.3
MBD3-206ENST00000589901 TMEM219Q86XT9 240 aa13.15□□□□□ -0.3
MBD3-206ENST00000589901 STMN2Q93045 179 aa13.15□□□□□ -0.3
MBD3-206ENST00000589901 IL4I1Q96RQ9 567 aa13.15□□□□□ -0.3
MBD3-206ENST00000589901 PKIBQ9C010 78 aa13.15□□□□□ -0.3
MBD3-206ENST00000589901 MTCH1Q9NZJ7 389 aa13.15□□□□□ -0.3
MBD3-206ENST00000589901 WARS2Q9UGM6 360 aaKnown RBP13.15□□□□□ -0.3
MBD3-206ENST00000589901 TCF19Q9Y242 345 aa13.15□□□□□ -0.3
MBD3-206ENST00000589901 DHRS7CA6NNS2 312 aa13.14□□□□□ -0.31
MBD3-206ENST00000589901 ODF3BA8MYP8 253 aa13.14□□□□□ -0.31
MBD3-206ENST00000589901 INMTO95050 263 aa13.14□□□□□ -0.31
MBD3-206ENST00000589901 ZNF728P0DKX0 622 aa13.14□□□□□ -0.31
MBD3-206ENST00000589901 CD28P10747 220 aa13.14□□□□□ -0.31
MBD3-206ENST00000589901 CCL1P22362 96 aa13.14□□□□□ -0.31
MBD3-206ENST00000589901 EDDM3BP56851 147 aa13.14□□□□□ -0.31
MBD3-206ENST00000589901 IL24Q13007 206 aa13.14□□□□□ -0.31
MBD3-206ENST00000589901 SSX2Q16385 188 aa13.14□□□□□ -0.31
MBD3-206ENST00000589901 OR8J1Q8NGP2 316 aa13.14□□□□□ -0.31
MBD3-206ENST00000589901 OR13D1Q8NGV5 346 aa13.14□□□□□ -0.31
MBD3-206ENST00000589901 TBX5Q99593 518 aa13.14□□□□□ -0.31
MBD3-206ENST00000589901 GABARAPL3Q9BY60 117 aa13.14□□□□□ -0.31
MBD3-206ENST00000589901 IGKV1-27A0A075B6S5 117 aa13.13□□□□□ -0.31
MBD3-206ENST00000589901 A6NDX4 124 aa13.13□□□□□ -0.31
MBD3-206ENST00000589901 FBXO24O75426 580 aa13.13□□□□□ -0.31
MBD3-206ENST00000589901 KRT8P05787 483 aa13.13□□□□□ -0.31
MBD3-206ENST00000589901 JUNBP17275 347 aaPredicted RBP13.13□□□□□ -0.31
MBD3-206ENST00000589901 DYNC1I2Q13409 638 aaKnown RBP13.13□□□□□ -0.31
MBD3-206ENST00000589901 TMED1Q13445 227 aa13.13□□□□□ -0.31
MBD3-206ENST00000589901 UBE2V2Q15819 145 aa13.13□□□□□ -0.31
MBD3-206ENST00000589901 FBLN7Q53RD9 439 aa13.13□□□□□ -0.31
MBD3-206ENST00000589901 ZNF626Q68DY1 528 aa13.13□□□□□ -0.31
MBD3-206ENST00000589901 GDPD3Q7L5L3 318 aa13.13□□□□□ -0.31
MBD3-206ENST00000589901 TCF23Q7RTU1 214 aa13.13□□□□□ -0.31
MBD3-206ENST00000589901 Q8N2B8 174 aa13.13□□□□□ -0.31
MBD3-206ENST00000589901 YIPF7Q8N8F6 280 aa13.13□□□□□ -0.31
MBD3-206ENST00000589901 DTX3Q8N9I9 347 aa13.13□□□□□ -0.31
MBD3-206ENST00000589901 OR11H6Q8NGC7 330 aa13.13□□□□□ -0.31
MBD3-206ENST00000589901 TRUB1Q8WWH5 349 aaKnown RBP13.13□□□□□ -0.31
MBD3-206ENST00000589901 SLAMF9Q96A28 289 aa13.13□□□□□ -0.31
MBD3-206ENST00000589901 FOXRED1Q96CU9 486 aaPredicted RBP13.13□□□□□ -0.31
MBD3-206ENST00000589901 MALSU1Q96EH3 234 aa13.13□□□□□ -0.31
MBD3-206ENST00000589901 CEP19Q96LK0 163 aa13.13□□□□□ -0.31
MBD3-206ENST00000589901 OR5M11Q96RB7 305 aa13.13□□□□□ -0.31
MBD3-206ENST00000589901 MYCBPQ99417 103 aaPredicted RBP13.13□□□□□ -0.31
MBD3-206ENST00000589901 MMP28Q9H239 520 aa13.13□□□□□ -0.31
MBD3-206ENST00000589901 ABCB10Q9NRK6 738 aa13.13□□□□□ -0.31
MBD3-206ENST00000589901 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.13□□□□□ -0.31
MBD3-206ENST00000589901 SLC7A11Q9UPY5 501 aa13.13□□□□□ -0.31
MBD3-206ENST00000589901 TBL2Q9Y4P3 447 aaKnown RBP13.13□□□□□ -0.31
MBD3-206ENST00000589901 TMEM82A0PJX8 343 aa13.12□□□□□ -0.31
MBD3-206ENST00000589901 APOL3O95236 402 aa13.12□□□□□ -0.31
MBD3-206ENST00000589901 CHRM2P08172 466 aa13.12□□□□□ -0.31
MBD3-206ENST00000589901 IGHV1-8P0DP01 117 aa13.12□□□□□ -0.31
MBD3-206ENST00000589901 EDDM3AQ14507 147 aa13.12□□□□□ -0.31
MBD3-206ENST00000589901 CNN3Q15417 329 aaKnown RBP13.12□□□□□ -0.31
MBD3-206ENST00000589901 OXLD1Q5BKU9 147 aa13.12□□□□□ -0.31
MBD3-206ENST00000589901 Q6ZPA2 131 aa13.12□□□□□ -0.31
MBD3-206ENST00000589901 Q6ZS46 218 aa13.12□□□□□ -0.31
MBD3-206ENST00000589901 CATSPERDQ86XM0 798 aa13.12□□□□□ -0.31
MBD3-206ENST00000589901 RPS4Y2Q8TD47 263 aa13.12□□□□□ -0.31
MBD3-206ENST00000589901 WIPF2Q8TF74 440 aaPredicted RBP13.12□□□□□ -0.31
MBD3-206ENST00000589901 C9orf16Q9BUW7 83 aa13.12□□□□□ -0.31
MBD3-206ENST00000589901 CDCA4Q9BXL8 241 aa13.12□□□□□ -0.31
MBD3-206ENST00000589901 PLEKHA1Q9HB21 404 aa13.12□□□□□ -0.31
MBD3-206ENST00000589901 IL36RNQ9UBH0 155 aa13.12□□□□□ -0.31
MBD3-206ENST00000589901 A0A1W2PQL4 384 aaPredicted RBP13.11□□□□□ -0.31
MBD3-206ENST00000589901 EI24O14681 340 aa13.11□□□□□ -0.31
MBD3-206ENST00000589901 SYT7O43581 403 aa13.11□□□□□ -0.31
MBD3-206ENST00000589901 RBP4P02753 201 aa13.11□□□□□ -0.31
MBD3-206ENST00000589901 OR2T7P0C7T2 308 aa13.11□□□□□ -0.31
MBD3-206ENST00000589901 HTR1FP30939 366 aa13.11□□□□□ -0.31
MBD3-206ENST00000589901 ALDH3A2P51648 485 aa13.11□□□□□ -0.31
MBD3-206ENST00000589901 SLC25A26Q70HW3 274 aa13.11□□□□□ -0.31
MBD3-206ENST00000589901 FAM220AQ7Z4H9 259 aa13.11□□□□□ -0.31
MBD3-206ENST00000589901 OR8H2Q8N162 312 aa13.11□□□□□ -0.31
MBD3-206ENST00000589901 TPRX1Q8N7U7 411 aa13.11□□□□□ -0.31
MBD3-206ENST00000589901 ZNF714Q96N38 554 aa13.11□□□□□ -0.31
MBD3-206ENST00000589901 CITED2Q99967 270 aaPredicted RBP13.11□□□□□ -0.31
MBD3-206ENST00000589901 HILPDAQ9Y5L2 63 aa13.11□□□□□ -0.31
MBD3-206ENST00000589901 NOTCH3Q9UM47 2321 aa13.11□□□□□ -0.31
MBD3-206ENST00000589901 ADARB2-AS1A8MUL3 147 aa13.1□□□□□ -0.31
MBD3-206ENST00000589901 IGHA1P01876 353 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms