RNA–Protein interactions for RNA: ENST00000571272.5

SCARF1-205, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCARF1, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-205ENST00000571272 TXNL1O43396 289 aa15.2■□□□□ 0.02
SCARF1-205ENST00000571272 CA11O75493 328 aa15.2■□□□□ 0.02
SCARF1-205ENST00000571272 SMIM6P0DI80 62 aa15.2■□□□□ 0.02
SCARF1-205ENST00000571272 RAB5AP20339 215 aa15.2■□□□□ 0.02
SCARF1-205ENST00000571272 P2RY1P47900 373 aa15.2■□□□□ 0.02
SCARF1-205ENST00000571272 PPA1Q15181 289 aa15.2■□□□□ 0.02
SCARF1-205ENST00000571272 RABEPKQ7Z6M1 372 aa15.2■□□□□ 0.02
SCARF1-205ENST00000571272 KMT5CQ86Y97 462 aa15.2■□□□□ 0.02
SCARF1-205ENST00000571272 METTL9Q9H1A3 318 aa15.2■□□□□ 0.02
SCARF1-205ENST00000571272 GSN-AS1Q9NRJ2 163 aa15.2■□□□□ 0.02
SCARF1-205ENST00000571272 IGKV1-27A0A075B6S5 117 aa15.2■□□□□ 0.02
SCARF1-205ENST00000571272 CCDC187A0A096LP49 1063 aa15.2■□□□□ 0.02
SCARF1-205ENST00000571272 CCDC85CA6NKD9 419 aa15.2■□□□□ 0.02
SCARF1-205ENST00000571272 G3V3Y1 287 aa15.2■□□□□ 0.02
SCARF1-205ENST00000571272 S100A8P05109 93 aa15.2■□□□□ 0.02
SCARF1-205ENST00000571272 PPP1CCP36873 323 aaKnown RBP15.2■□□□□ 0.02
SCARF1-205ENST00000571272 SULT1A1P50225 295 aa15.2■□□□□ 0.02
SCARF1-205ENST00000571272 WDR74Q6RFH5 385 aaPredicted RBP15.2■□□□□ 0.02
SCARF1-205ENST00000571272 GNRHR2Q96P88 292 aa15.2■□□□□ 0.02
SCARF1-205ENST00000571272 SLC2A9Q9NRM0 540 aa15.2■□□□□ 0.02
SCARF1-205ENST00000571272 RCL1Q9Y2P8 373 aaKnown RBP15.2■□□□□ 0.02
SCARF1-205ENST00000571272 GPR137BO60478 399 aa15.19■□□□□ 0.02
SCARF1-205ENST00000571272 ITGA3P26006 1051 aa15.19■□□□□ 0.02
SCARF1-205ENST00000571272 PIGYQ3MUY2 71 aa15.19■□□□□ 0.02
SCARF1-205ENST00000571272 SLC22A25Q6T423 547 aa15.19■□□□□ 0.02
SCARF1-205ENST00000571272 TMEM182Q6ZP80 229 aaPredicted RBP15.19■□□□□ 0.02
SCARF1-205ENST00000571272 FAM213BQ8TBF2 198 aa15.19■□□□□ 0.02
SCARF1-205ENST00000571272 TCEAL3Q969E4 200 aa15.19■□□□□ 0.02
SCARF1-205ENST00000571272 GINS3Q9BRX5 216 aa15.19■□□□□ 0.02
SCARF1-205ENST00000571272 KCNJ16Q9NPI9 418 aa15.19■□□□□ 0.02
SCARF1-205ENST00000571272 NPIPA2E9PIF3 369 aa15.19■□□□□ 0.02
SCARF1-205ENST00000571272 NPIPA3F8WFD2 350 aa15.19■□□□□ 0.02
SCARF1-205ENST00000571272 GEMIN2O14893 280 aaKnown RBP15.19■□□□□ 0.02
SCARF1-205ENST00000571272 DHHO43323 396 aa15.19■□□□□ 0.02
SCARF1-205ENST00000571272 CELA2AP08217 269 aa15.19■□□□□ 0.02
SCARF1-205ENST00000571272 RAB30Q15771 203 aa15.19■□□□□ 0.02
SCARF1-205ENST00000571272 MEX3BQ6ZN04 569 aaKnown RBP15.19■□□□□ 0.02
SCARF1-205ENST00000571272 BATF2Q8N1L9 274 aa15.19■□□□□ 0.02
SCARF1-205ENST00000571272 LBX1P52954 281 aa15.18■□□□□ 0.02
SCARF1-205ENST00000571272 SPSB2Q99619 263 aa15.18■□□□□ 0.02
SCARF1-205ENST00000571272 ZNF251Q9BRH9 671 aa15.18■□□□□ 0.02
SCARF1-205ENST00000571272 MTCH2Q9Y6C9 303 aa15.18■□□□□ 0.02
SCARF1-205ENST00000571272 TRAV20A0A0B4J274 112 aa15.18■□□□□ 0.02
SCARF1-205ENST00000571272 PHF1O43189 567 aaPredicted RBP15.18■□□□□ 0.02
SCARF1-205ENST00000571272 CD63P08962 238 aa15.18■□□□□ 0.02
SCARF1-205ENST00000571272 EIF1P41567 113 aaKnown RBP15.18■□□□□ 0.02
SCARF1-205ENST00000571272 SHBQ15464 509 aa15.18■□□□□ 0.02
SCARF1-205ENST00000571272 LIAT1Q6ZQX7 453 aa15.18■□□□□ 0.02
SCARF1-205ENST00000571272 JSRP1Q96MG2 331 aaPredicted RBP15.18■□□□□ 0.02
SCARF1-205ENST00000571272 RARRES2Q99969 163 aa15.18■□□□□ 0.02
SCARF1-205ENST00000571272 PUS1Q9Y606 427 aaKnown RBP eCLIP15.18■□□□□ 0.02
SCARF1-205ENST00000571272 NSG1A0A0A6YYJ2 146 aa15.18■□□□□ 0.02
SCARF1-205ENST00000571272 GPR37O15354 613 aa15.18■□□□□ 0.02
SCARF1-205ENST00000571272 OTX1P32242 354 aaPredicted RBP15.18■□□□□ 0.02
SCARF1-205ENST00000571272 H3F3AP84243 136 aa15.18■□□□□ 0.02
SCARF1-205ENST00000571272 EIF3IQ13347 325 aaKnown RBP15.18■□□□□ 0.02
SCARF1-205ENST00000571272 CLINT1Q14677 625 aa15.18■□□□□ 0.02
SCARF1-205ENST00000571272 C10orf128Q5T292 105 aa15.18■□□□□ 0.02
SCARF1-205ENST00000571272 RAET1LQ5VY80 246 aa15.18■□□□□ 0.02
SCARF1-205ENST00000571272 COMMD1Q8N668 190 aa15.18■□□□□ 0.02
SCARF1-205ENST00000571272 HPSE2Q8WWQ2 592 aa15.18■□□□□ 0.02
SCARF1-205ENST00000571272 SPTSSAQ969W0 71 aa15.18■□□□□ 0.02
SCARF1-205ENST00000571272 GALNT14Q96FL9 552 aa15.18■□□□□ 0.02
SCARF1-205ENST00000571272 CHCHD2Q9Y6H1 151 aaPredicted RBP15.18■□□□□ 0.02
SCARF1-205ENST00000571272 LOC102725191A0A1B0GVB3 256 aa15.17■□□□□ 0.02
SCARF1-205ENST00000571272 ST8SIA3O43173 380 aa15.17■□□□□ 0.02
SCARF1-205ENST00000571272 PATE4P0C8F1 98 aa15.17■□□□□ 0.02
SCARF1-205ENST00000571272 DUSP1P28562 367 aa15.17■□□□□ 0.02
SCARF1-205ENST00000571272 UCP2P55851 309 aa15.17■□□□□ 0.02
SCARF1-205ENST00000571272 FADS6Q8N9I5 356 aa15.17■□□□□ 0.02
SCARF1-205ENST00000571272 ZNF565Q8N9K5 539 aa15.17■□□□□ 0.02
SCARF1-205ENST00000571272 SUMF1Q8NBK3 374 aa15.17■□□□□ 0.02
SCARF1-205ENST00000571272 CADM4Q8NFZ8 388 aa15.17■□□□□ 0.02
SCARF1-205ENST00000571272 OR10AD1Q8NGE0 317 aa15.17■□□□□ 0.02
SCARF1-205ENST00000571272 MSI2Q96DH6 328 aaKnown RBP15.17■□□□□ 0.02
SCARF1-205ENST00000571272 TAAR9Q96RI9 348 aa15.17■□□□□ 0.02
SCARF1-205ENST00000571272 ULBP2Q9BZM5 246 aa15.17■□□□□ 0.02
SCARF1-205ENST00000571272 SLC35B3Q9H1N7 401 aa15.17■□□□□ 0.02
SCARF1-205ENST00000571272 H7C1Q1 480 aa15.17■□□□□ 0.02
SCARF1-205ENST00000571272 OR8U8P0C7N1 319 aa15.17■□□□□ 0.02
SCARF1-205ENST00000571272 CHATP28329 748 aa15.17■□□□□ 0.02
SCARF1-205ENST00000571272 ZNF239Q16600 458 aaKnown RBP15.17■□□□□ 0.02
SCARF1-205ENST00000571272 GPR157Q5UAW9 335 aa15.17■□□□□ 0.02
SCARF1-205ENST00000571272 TMEM54Q969K7 222 aa15.17■□□□□ 0.02
SCARF1-205ENST00000571272 C18orf12Q96KH6 178 aa15.17■□□□□ 0.02
SCARF1-205ENST00000571272 TUBA4BQ9H853 241 aa15.17■□□□□ 0.02
SCARF1-205ENST00000571272 NR2C1P13056 603 aa15.16■□□□□ 0.02
SCARF1-205ENST00000571272 FBXL14Q8N1E6 418 aa15.16■□□□□ 0.02
SCARF1-205ENST00000571272 OR1J1Q8NGS3 322 aa15.16■□□□□ 0.02
SCARF1-205ENST00000571272 ABHD14AQ9BUJ0 271 aa15.16■□□□□ 0.02
SCARF1-205ENST00000571272 SEBOXQ9HB31 216 aaPredicted RBP15.16■□□□□ 0.02
SCARF1-205ENST00000571272 METTL1Q9UBP6 276 aaKnown RBP15.16■□□□□ 0.02
SCARF1-205ENST00000571272 LCATP04180 440 aa15.16■□□□□ 0.02
SCARF1-205ENST00000571272 OMGP23515 440 aa15.16■□□□□ 0.02
SCARF1-205ENST00000571272 CEBPGP53567 150 aa15.16■□□□□ 0.02
SCARF1-205ENST00000571272 ZNF774Q6NX45 483 aa15.16■□□□□ 0.02
SCARF1-205ENST00000571272 BORCS8Q96FH0 119 aa15.16■□□□□ 0.02
SCARF1-205ENST00000571272 SUCNR1Q9BXA5 334 aa15.16■□□□□ 0.02
SCARF1-205ENST00000571272 MIOXQ9UGB7 285 aa15.16■□□□□ 0.02
SCARF1-205ENST00000571272 IGKV1-12A0A0C4DH73 117 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms