RNA–Protein interactions for RNA: ENST00000557496.1

FOXN3-216, Transcript of forkhead box N3, humanhuman

TSL 5

Gene FOXN3, Length 228 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-216ENST00000557496 H3BRN7 92 aa0.04□□□□□ -2.4
FOXN3-216ENST00000557496 K7EN84 100 aa0.04□□□□□ -2.4
FOXN3-216ENST00000557496 K7EPK0 472 aa0.04□□□□□ -2.4
FOXN3-216ENST00000557496 LECT2O14960 151 aa0.04□□□□□ -2.4
FOXN3-216ENST00000557496 NDUFS5O43920 106 aa0.04□□□□□ -2.4
FOXN3-216ENST00000557496 MPDU1O75352 247 aa0.04□□□□□ -2.4
FOXN3-216ENST00000557496 ERLIN1O75477 346 aa0.04□□□□□ -2.4
FOXN3-216ENST00000557496 KRT34O76011 436 aa0.04□□□□□ -2.4
FOXN3-216ENST00000557496 CXorf1O96002 111 aa0.04□□□□□ -2.4
FOXN3-216ENST00000557496 NAPSAO96009 420 aa0.04□□□□□ -2.4
FOXN3-216ENST00000557496 IGKV1D-12P01611 117 aa0.04□□□□□ -2.4
FOXN3-216ENST00000557496 HLA-HP01893 362 aa0.04□□□□□ -2.4
FOXN3-216ENST00000557496 KRT14P02533 472 aa0.04□□□□□ -2.4
FOXN3-216ENST00000557496 IGKV5-2P06315 115 aa0.04□□□□□ -2.4
FOXN3-216ENST00000557496 ERCC1P07992 297 aaPredicted RBP0.04□□□□□ -2.4
FOXN3-216ENST00000557496 KRT16P08779 473 aa0.04□□□□□ -2.4
FOXN3-216ENST00000557496 UBCP0CG48 685 aaKnown RBP0.04□□□□□ -2.4
FOXN3-216ENST00000557496 OR8G3PP0DMU2 310 aa0.04□□□□□ -2.4
FOXN3-216ENST00000557496 MYL2P10916 166 aa0.04□□□□□ -2.4
FOXN3-216ENST00000557496 GZMAP12544 262 aa0.04□□□□□ -2.4
FOXN3-216ENST00000557496 GABRA1P14867 456 aa0.04□□□□□ -2.4
FOXN3-216ENST00000557496 GSTM3P21266 225 aa0.04□□□□□ -2.4
FOXN3-216ENST00000557496 SLC6A1P30531 599 aa0.04□□□□□ -2.4
FOXN3-216ENST00000557496 TNNT2P45379 298 aaPredicted RBP0.04□□□□□ -2.4
FOXN3-216ENST00000557496 MRPL19P49406 292 aaKnown RBP0.04□□□□□ -2.4
FOXN3-216ENST00000557496 MLF1P58340 268 aa0.04□□□□□ -2.4
FOXN3-216ENST00000557496 DOC2AQ14183 400 aa0.04□□□□□ -2.4
FOXN3-216ENST00000557496 PMVKQ15126 192 aa0.04□□□□□ -2.4
FOXN3-216ENST00000557496 ELOCQ15369 112 aa0.04□□□□□ -2.4
FOXN3-216ENST00000557496 FBXL19-AS1Q494R0 122 aa0.04□□□□□ -2.4
FOXN3-216ENST00000557496 LRRC23Q53EV4 343 aaPredicted RBP0.04□□□□□ -2.4
FOXN3-216ENST00000557496 CLLU1OSQ5K130 101 aa0.04□□□□□ -2.4
FOXN3-216ENST00000557496 ARMC12Q5T9G4 340 aa0.04□□□□□ -2.4
FOXN3-216ENST00000557496 HES3Q5TGS1 186 aa0.04□□□□□ -2.4
FOXN3-216ENST00000557496 LGALS9CQ6DKI2 356 aa0.04□□□□□ -2.4
FOXN3-216ENST00000557496 LAIR2Q6ISS4 152 aa0.04□□□□□ -2.4
FOXN3-216ENST00000557496 NOXRED1Q6NXP6 359 aa0.04□□□□□ -2.4
FOXN3-216ENST00000557496 TMEM53Q6P2H8 277 aa0.04□□□□□ -2.4
FOXN3-216ENST00000557496 SPESP1Q6UW49 350 aa0.04□□□□□ -2.4
FOXN3-216ENST00000557496 ASCL4Q6XD76 172 aa0.04□□□□□ -2.4
FOXN3-216ENST00000557496 FAM43BQ6ZT52 329 aaPredicted RBP0.04□□□□□ -2.4
FOXN3-216ENST00000557496 SETD3Q86TU7 594 aaPredicted RBP0.04□□□□□ -2.4
FOXN3-216ENST00000557496 SLC30A8Q8IWU4 369 aa0.04□□□□□ -2.4
FOXN3-216ENST00000557496 AMN1Q8IY45 258 aa0.04□□□□□ -2.4
FOXN3-216ENST00000557496 GABRG1Q8N1C3 465 aa0.04□□□□□ -2.4
FOXN3-216ENST00000557496 ARL6IP6Q8N6S5 226 aa0.04□□□□□ -2.4
FOXN3-216ENST00000557496 ZDHHC22Q8N966 263 aa0.04□□□□□ -2.4
FOXN3-216ENST00000557496 CCDC148Q8NFR7 591 aa0.04□□□□□ -2.4
FOXN3-216ENST00000557496 OR2M3Q8NG83 312 aa0.04□□□□□ -2.4
FOXN3-216ENST00000557496 OR5C1Q8NGR4 320 aa0.04□□□□□ -2.4
FOXN3-216ENST00000557496 ITFG1Q8TB96 612 aa0.04□□□□□ -2.4
FOXN3-216ENST00000557496 SUN5Q8TC36 379 aa0.04□□□□□ -2.4
FOXN3-216ENST00000557496 SFXN5Q8TD22 340 aa0.04□□□□□ -2.4
FOXN3-216ENST00000557496 CA5BP1Q8WTZ4 195 aa0.04□□□□□ -2.4
FOXN3-216ENST00000557496 ASZ1Q8WWH4 475 aa0.04□□□□□ -2.4
FOXN3-216ENST00000557496 TMEM234Q8WY98 164 aa0.04□□□□□ -2.4
FOXN3-216ENST00000557496 OR8D1Q8WZ84 308 aa0.04□□□□□ -2.4
FOXN3-216ENST00000557496 TFGQ92734 400 aaPredicted RBP0.04□□□□□ -2.4
FOXN3-216ENST00000557496 C8orf44Q96CB5 159 aa0.04□□□□□ -2.4
FOXN3-216ENST00000557496 FMC1Q96HJ9 113 aa0.04□□□□□ -2.4
FOXN3-216ENST00000557496 RNF170Q96K19 258 aa0.04□□□□□ -2.4
FOXN3-216ENST00000557496 B9D2Q9BPU9 175 aa0.04□□□□□ -2.4
FOXN3-216ENST00000557496 ZNF251Q9BRH9 671 aa0.04□□□□□ -2.4
FOXN3-216ENST00000557496 MRPL32Q9BYC8 188 aaKnown RBP0.04□□□□□ -2.4
FOXN3-216ENST00000557496 GABARAPL1Q9H0R8 117 aa0.04□□□□□ -2.4
FOXN3-216ENST00000557496 STMN4Q9H169 189 aaPredicted RBP0.04□□□□□ -2.4
FOXN3-216ENST00000557496 OR2D2Q9H210 308 aa0.04□□□□□ -2.4
FOXN3-216ENST00000557496 TXNIPQ9H3M7 391 aa0.04□□□□□ -2.4
FOXN3-216ENST00000557496 ELOVL6Q9H5J4 265 aa0.04□□□□□ -2.4
FOXN3-216ENST00000557496 POMKQ9H5K3 350 aa0.04□□□□□ -2.4
FOXN3-216ENST00000557496 VPS37BQ9H9H4 285 aa0.04□□□□□ -2.4
FOXN3-216ENST00000557496 FANCEQ9HB96 536 aa0.04□□□□□ -2.4
FOXN3-216ENST00000557496 CCNB1IP1Q9NPC3 277 aa0.04□□□□□ -2.4
FOXN3-216ENST00000557496 LYARQ9NX58 379 aaKnown RBP0.04□□□□□ -2.4
FOXN3-216ENST00000557496 GCNT4Q9P109 453 aa0.04□□□□□ -2.4
FOXN3-216ENST00000557496 RHBDD3Q9Y3P4 386 aa0.04□□□□□ -2.4
FOXN3-216ENST00000557496 LINC00588Q9Y4M8 146 aa0.04□□□□□ -2.4
FOXN3-216ENST00000557496 ENPP4Q9Y6X5 453 aa0.04□□□□□ -2.4
FOXN3-216ENST00000557496 MINOS1-NBL1R4GNA1 71 aa0.04□□□□□ -2.4
FOXN3-216ENST00000557496 HSPE1-MOB4S4R3N1 261 aa0.04□□□□□ -2.4
FOXN3-216ENST00000557496 EML6Q6ZMW3 1958 aa0.04□□□□□ -2.4
FOXN3-216ENST00000557496 NSD2O96028 1365 aa0.04□□□□□ -2.4
FOXN3-216ENST00000557496 KANK1Q14678 1352 aa0.04□□□□□ -2.4
FOXN3-216ENST00000557496 SNRNP200O75643 2136 aaKnown RBP0.04□□□□□ -2.4
FOXN3-216ENST00000557496 ALPK2Q86TB3 2170 aa0.04□□□□□ -2.4
FOXN3-216ENST00000557496 TNRC6BQ9UPQ9 1833 aaKnown RBP0.03□□□□□ -2.4
FOXN3-216ENST00000557496 MAST4O15021 2626 aa0.03□□□□□ -2.4
FOXN3-216ENST00000557496 IGHV3-21A0A0B4J1V1 117 aa0.03□□□□□ -2.4
FOXN3-216ENST00000557496 IGHV2OR16-5A0A0B4J2B6 119 aa0.03□□□□□ -2.4
FOXN3-216ENST00000557496 LOC102725191A0A1B0GVB3 256 aa0.03□□□□□ -2.4
FOXN3-216ENST00000557496 SERTM2A0A1B0GWG4 89 aa0.03□□□□□ -2.4
FOXN3-216ENST00000557496 A0A1B0GXF2 115 aa0.03□□□□□ -2.4
FOXN3-216ENST00000557496 LEUTXA8MZ59 168 aa0.03□□□□□ -2.4
FOXN3-216ENST00000557496 HACD1B0YJ81 288 aa0.03□□□□□ -2.4
FOXN3-216ENST00000557496 F5H5P2 479 aa0.03□□□□□ -2.4
FOXN3-216ENST00000557496 H3BN98 237 aa0.03□□□□□ -2.4
FOXN3-216ENST00000557496 J3QLI3 93 aa0.03□□□□□ -2.4
FOXN3-216ENST00000557496 TRDMT1O14717 391 aaKnown RBP0.03□□□□□ -2.4
FOXN3-216ENST00000557496 CPLX1O14810 134 aa0.03□□□□□ -2.4
FOXN3-216ENST00000557496 GYG2O15488 501 aa0.03□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms