RNA–Protein interactions for RNA: ENST00000553455.1

SYNE2-210, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2 BASIC

Gene SYNE2, Length 674 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-210ENST00000553455 CYP4Z2PQ8N1L4 340 aa2.69□□□□□ -1.98
SYNE2-210ENST00000553455 TRIML2Q8N7C3 387 aa2.69□□□□□ -1.98
SYNE2-210ENST00000553455 OR4D6Q8NGJ1 314 aa2.69□□□□□ -1.98
SYNE2-210ENST00000553455 ZNF721Q8TF20 911 aa2.69□□□□□ -1.98
SYNE2-210ENST00000553455 QKIQ96PU8 341 aaKnown RBP eCLIP2.69□□□□□ -1.98
SYNE2-210ENST00000553455 API5Q9BZZ5 524 aaKnown RBP2.69□□□□□ -1.98
SYNE2-210ENST00000553455 WDR55Q9H6Y2 383 aaPredicted RBP2.69□□□□□ -1.98
SYNE2-210ENST00000553455 TNKS1BP1Q9C0C2 1729 aaKnown RBP2.68□□□□□ -1.98
SYNE2-210ENST00000553455 IGKV1D-17A0A075B6S4 117 aa2.68□□□□□ -1.98
SYNE2-210ENST00000553455 IZUMO1RA6ND01 250 aa2.68□□□□□ -1.98
SYNE2-210ENST00000553455 OR2AT4A6NND4 320 aa2.68□□□□□ -1.98
SYNE2-210ENST00000553455 FAM25EA8MYX2 175 aa2.68□□□□□ -1.98
SYNE2-210ENST00000553455 TCAPO15273 167 aa2.68□□□□□ -1.98
SYNE2-210ENST00000553455 OR2A4O95047 310 aa2.68□□□□□ -1.98
SYNE2-210ENST00000553455 RLN2P04090 185 aa2.68□□□□□ -1.98
SYNE2-210ENST00000553455 IGLV7-43P04211 117 aa2.68□□□□□ -1.98
SYNE2-210ENST00000553455 RNASE2P10153 161 aaKnown RBP2.68□□□□□ -1.98
SYNE2-210ENST00000553455 DNASE1L1P49184 302 aa2.68□□□□□ -1.98
SYNE2-210ENST00000553455 SLC18A1P54219 525 aa2.68□□□□□ -1.98
SYNE2-210ENST00000553455 HADHBP55084 474 aaKnown RBP2.68□□□□□ -1.98
SYNE2-210ENST00000553455 ZDHHC22Q8N966 263 aa2.68□□□□□ -1.98
SYNE2-210ENST00000553455 ZFP62Q8NB50 900 aaPredicted RBP2.68□□□□□ -1.98
SYNE2-210ENST00000553455 OR1P1Q8NH06 330 aa2.68□□□□□ -1.98
SYNE2-210ENST00000553455 OR51Q1Q8NH59 317 aa2.68□□□□□ -1.98
SYNE2-210ENST00000553455 OR2M4Q96R27 311 aa2.68□□□□□ -1.98
SYNE2-210ENST00000553455 OR2A7Q96R45 310 aa2.68□□□□□ -1.98
SYNE2-210ENST00000553455 VAT1Q99536 393 aa2.68□□□□□ -1.98
SYNE2-210ENST00000553455 CIB1Q99828 191 aa2.68□□□□□ -1.98
SYNE2-210ENST00000553455 COPS4Q9BT78 406 aa2.68□□□□□ -1.98
SYNE2-210ENST00000553455 PLEKHA1Q9HB21 404 aa2.68□□□□□ -1.98
SYNE2-210ENST00000553455 FAM60AQ9NP50 221 aa2.68□□□□□ -1.98
SYNE2-210ENST00000553455 CYB5R1Q9UHQ9 305 aa2.68□□□□□ -1.98
SYNE2-210ENST00000553455 NXT1Q9UKK6 140 aaKnown RBP2.68□□□□□ -1.98
SYNE2-210ENST00000553455 INSIG2Q9Y5U4 225 aa2.68□□□□□ -1.98
SYNE2-210ENST00000553455 ADAMTSL3P82987 1691 aa2.68□□□□□ -1.98
SYNE2-210ENST00000553455 MYO15BQ96JP2 1530 aa2.68□□□□□ -1.98
SYNE2-210ENST00000553455 THADAQ6YHU6 1953 aa2.67□□□□□ -1.98
SYNE2-210ENST00000553455 KIR2DS1A0A191URI9 304 aa2.67□□□□□ -1.98
SYNE2-210ENST00000553455 VGLL3A8MV65 326 aa2.67□□□□□ -1.98
SYNE2-210ENST00000553455 FSTL3O95633 263 aa2.67□□□□□ -1.98
SYNE2-210ENST00000553455 SNRPAP09012 282 aaKnown RBP2.67□□□□□ -1.98
SYNE2-210ENST00000553455 TAC1P20366 129 aa2.67□□□□□ -1.98
SYNE2-210ENST00000553455 RANBP1P43487 201 aa2.67□□□□□ -1.98
SYNE2-210ENST00000553455 STX4Q12846 297 aa2.67□□□□□ -1.98
SYNE2-210ENST00000553455 IL15RAQ13261 267 aa2.67□□□□□ -1.98
SYNE2-210ENST00000553455 ELOCQ15369 112 aa2.67□□□□□ -1.98
SYNE2-210ENST00000553455 KRTAP5-5Q701N2 237 aaPredicted RBP2.67□□□□□ -1.98
SYNE2-210ENST00000553455 TRMT10CQ7L0Y3 403 aaKnown RBP2.67□□□□□ -1.98
SYNE2-210ENST00000553455 OR5H2Q8NGV7 314 aa2.67□□□□□ -1.98
SYNE2-210ENST00000553455 UBA3Q8TBC4 463 aa2.67□□□□□ -1.98
SYNE2-210ENST00000553455 ITLN2Q8WWU7 325 aaPredicted RBP2.67□□□□□ -1.98
SYNE2-210ENST00000553455 ZNF75AQ96N20 296 aa2.67□□□□□ -1.98
SYNE2-210ENST00000553455 ZNF396Q96N95 335 aaPredicted RBP2.67□□□□□ -1.98
SYNE2-210ENST00000553455 SEC22CQ9BRL7 303 aa2.67□□□□□ -1.98
SYNE2-210ENST00000553455 ABCB9Q9NP78 766 aa2.67□□□□□ -1.98
SYNE2-210ENST00000553455 PARP11Q9NR21 331 aa2.67□□□□□ -1.98
SYNE2-210ENST00000553455 TMEM38BQ9NVV0 291 aa2.67□□□□□ -1.98
SYNE2-210ENST00000553455 NLE1Q9NVX2 485 aaPredicted RBP2.67□□□□□ -1.98
SYNE2-210ENST00000553455 RBM22Q9NW64 420 aaKnown RBP eCLIP2.67□□□□□ -1.98
SYNE2-210ENST00000553455 SHANK1Q9Y566 2161 aa2.67□□□□□ -1.98
SYNE2-210ENST00000553455 SEC16AO15027 2179 aa2.66□□□□□ -1.98
SYNE2-210ENST00000553455 LOC389332A0A1B0GUA5 103 aa2.66□□□□□ -1.98
SYNE2-210ENST00000553455 A0A1B0GW15 77 aa2.66□□□□□ -1.98
SYNE2-210ENST00000553455 hCG_2039718K7EN88 272 aa2.66□□□□□ -1.98
SYNE2-210ENST00000553455 APOA1P02647 267 aa2.66□□□□□ -1.98
SYNE2-210ENST00000553455 TUFMP49411 452 aaKnown RBP2.66□□□□□ -1.98
SYNE2-210ENST00000553455 PSG3Q16557 428 aa2.66□□□□□ -1.98
SYNE2-210ENST00000553455 Q499Y3 187 aa2.66□□□□□ -1.98
SYNE2-210ENST00000553455 CLEC12AQ5QGZ9 265 aa2.66□□□□□ -1.98
SYNE2-210ENST00000553455 TMEM69Q5SWH9 247 aa2.66□□□□□ -1.98
SYNE2-210ENST00000553455 UGT2A3Q6UWM9 527 aa2.66□□□□□ -1.98
SYNE2-210ENST00000553455 CLEC18BQ6UXF7 455 aa2.66□□□□□ -1.98
SYNE2-210ENST00000553455 FA2HQ7L5A8 372 aa2.66□□□□□ -1.98
SYNE2-210ENST00000553455 SGPP2Q8IWX5 399 aa2.66□□□□□ -1.98
SYNE2-210ENST00000553455 CDRT4Q8N9R6 151 aa2.66□□□□□ -1.98
SYNE2-210ENST00000553455 C1orf64Q8NEQ6 169 aa2.66□□□□□ -1.98
SYNE2-210ENST00000553455 OR8K3Q8NH51 312 aa2.66□□□□□ -1.98
SYNE2-210ENST00000553455 C22orf15Q8WYQ4 148 aa2.66□□□□□ -1.98
SYNE2-210ENST00000553455 PEBP4Q96S96 227 aa2.66□□□□□ -1.98
SYNE2-210ENST00000553455 NXF2Q9GZY0 626 aaKnown RBP2.66□□□□□ -1.98
SYNE2-210ENST00000553455 LHX5Q9H2C1 402 aa2.66□□□□□ -1.98
SYNE2-210ENST00000553455 RBM12B-AS1Q9P1G2 102 aa2.66□□□□□ -1.98
SYNE2-210ENST00000553455 HMGXB4Q9UGU5 601 aa2.66□□□□□ -1.98
SYNE2-210ENST00000553455 SLC22A7Q9Y694 548 aa2.66□□□□□ -1.98
SYNE2-210ENST00000553455 A0A1B0GXF2 115 aa2.65□□□□□ -1.99
SYNE2-210ENST00000553455 RBFOX3A6NFN3 312 aa2.65□□□□□ -1.99
SYNE2-210ENST00000553455 ZNF233A6NK53 670 aa2.65□□□□□ -1.99
SYNE2-210ENST00000553455 ZNF879B4DU55 563 aa2.65□□□□□ -1.99
SYNE2-210ENST00000553455 C9JQL5 133 aa2.65□□□□□ -1.99
SYNE2-210ENST00000553455 FFAR1O14842 300 aa2.65□□□□□ -1.99
SYNE2-210ENST00000553455 CXorf1O96002 111 aa2.65□□□□□ -1.99
SYNE2-210ENST00000553455 CST4P01036 141 aa2.65□□□□□ -1.99
SYNE2-210ENST00000553455 NRASP01111 189 aa2.65□□□□□ -1.99
SYNE2-210ENST00000553455 HRASP01112 189 aa2.65□□□□□ -1.99
SYNE2-210ENST00000553455 KRASP01116 189 aa2.65□□□□□ -1.99
SYNE2-210ENST00000553455 M6PRP20645 277 aa2.65□□□□□ -1.99
SYNE2-210ENST00000553455 SLC6A1P30531 599 aa2.65□□□□□ -1.99
SYNE2-210ENST00000553455 HTR2BP41595 481 aa2.65□□□□□ -1.99
SYNE2-210ENST00000553455 ACOT2P49753 483 aa2.65□□□□□ -1.99
SYNE2-210ENST00000553455 SSX1Q16384 188 aa2.65□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms