RNA–Protein interactions for RNA: ENST00000551111.1

PRPF40B-212, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-212ENST00000551111 CD24P25063 80 aa9.28□□□□□ -0.92
PRPF40B-212ENST00000551111 DUSP1P28562 367 aa9.28□□□□□ -0.92
PRPF40B-212ENST00000551111 POLR2IP36954 125 aaKnown RBP9.28□□□□□ -0.92
PRPF40B-212ENST00000551111 NPBWR2P48146 333 aa9.28□□□□□ -0.92
PRPF40B-212ENST00000551111 FLOT2Q14254 428 aa9.28□□□□□ -0.92
PRPF40B-212ENST00000551111 EDDM3AQ14507 147 aa9.28□□□□□ -0.92
PRPF40B-212ENST00000551111 CNN3Q15417 329 aaKnown RBP9.28□□□□□ -0.92
PRPF40B-212ENST00000551111 UTF1Q5T230 341 aa9.28□□□□□ -0.92
PRPF40B-212ENST00000551111 LCN1P1Q5VSP4 162 aa9.28□□□□□ -0.92
PRPF40B-212ENST00000551111 C12orf73Q69YU5 71 aa9.28□□□□□ -0.92
PRPF40B-212ENST00000551111 RDH10Q8IZV5 341 aa9.28□□□□□ -0.92
PRPF40B-212ENST00000551111 OR11H6Q8NGC7 330 aa9.28□□□□□ -0.92
PRPF40B-212ENST00000551111 R3HDM4Q96D70 268 aa9.28□□□□□ -0.92
PRPF40B-212ENST00000551111 WNT10AQ9GZT5 417 aa9.28□□□□□ -0.92
PRPF40B-212ENST00000551111 CHST6Q9GZX3 395 aa9.28□□□□□ -0.92
PRPF40B-212ENST00000551111 RAB18Q9NP72 206 aa9.28□□□□□ -0.92
PRPF40B-212ENST00000551111 AURKAIP1Q9NWT8 199 aaPredicted RBP9.28□□□□□ -0.92
PRPF40B-212ENST00000551111 TMEM14AQ9Y6G1 99 aa9.28□□□□□ -0.92
PRPF40B-212ENST00000551111 NBEAL2Q6ZNJ1 2754 aa9.27□□□□□ -0.93
PRPF40B-212ENST00000551111 A0A1W2PQL4 384 aaPredicted RBP9.27□□□□□ -0.93
PRPF40B-212ENST00000551111 A0A1W2PRX2 142 aa9.27□□□□□ -0.93
PRPF40B-212ENST00000551111 ZAR1LA6NP61 321 aa9.27□□□□□ -0.93
PRPF40B-212ENST00000551111 PSPNO60542 156 aa9.27□□□□□ -0.93
PRPF40B-212ENST00000551111 CCL1P22362 96 aa9.27□□□□□ -0.93
PRPF40B-212ENST00000551111 IL24Q13007 206 aa9.27□□□□□ -0.93
PRPF40B-212ENST00000551111 DYNC1I2Q13409 638 aaKnown RBP9.27□□□□□ -0.93
PRPF40B-212ENST00000551111 TCTEX1D4Q5JR98 221 aa9.27□□□□□ -0.93
PRPF40B-212ENST00000551111 SLX4IPQ5VYV7 408 aa9.27□□□□□ -0.93
PRPF40B-212ENST00000551111 C11orf88Q6PI97 169 aa9.27□□□□□ -0.93
PRPF40B-212ENST00000551111 C10orf99Q6UWK7 81 aa9.27□□□□□ -0.93
PRPF40B-212ENST00000551111 CATSPERDQ86XM0 798 aa9.27□□□□□ -0.93
PRPF40B-212ENST00000551111 PRSS35Q8N3Z0 413 aa9.27□□□□□ -0.93
PRPF40B-212ENST00000551111 TMEM163Q8TC26 289 aa9.27□□□□□ -0.93
PRPF40B-212ENST00000551111 MRAPQ8TCY5 172 aa9.27□□□□□ -0.93
PRPF40B-212ENST00000551111 RPS4Y2Q8TD47 263 aa9.27□□□□□ -0.93
PRPF40B-212ENST00000551111 PHF21AQ96BD5 680 aa9.27□□□□□ -0.93
PRPF40B-212ENST00000551111 MALSU1Q96EH3 234 aa9.27□□□□□ -0.93
PRPF40B-212ENST00000551111 CEP19Q96LK0 163 aa9.27□□□□□ -0.93
PRPF40B-212ENST00000551111 OCSTAMPQ9BR26 566 aa9.27□□□□□ -0.93
PRPF40B-212ENST00000551111 PKIBQ9C010 78 aa9.27□□□□□ -0.93
PRPF40B-212ENST00000551111 CLN6Q9NWW5 311 aa9.27□□□□□ -0.93
PRPF40B-212ENST00000551111 POLDIP2Q9Y2S7 368 aa9.27□□□□□ -0.93
PRPF40B-212ENST00000551111 TBL2Q9Y4P3 447 aaKnown RBP9.27□□□□□ -0.93
PRPF40B-212ENST00000551111 SNX5Q9Y5X3 404 aa9.27□□□□□ -0.93
PRPF40B-212ENST00000551111 KMT2CQ8NEZ4 4911 aaKnown RBP9.26□□□□□ -0.93
PRPF40B-212ENST00000551111 IGKV1-9A0A0C4DH69 117 aa9.26□□□□□ -0.93
PRPF40B-212ENST00000551111 A0A1W2PPH5 198 aa9.26□□□□□ -0.93
PRPF40B-212ENST00000551111 SH2D7A6NKC9 451 aaPredicted RBP9.26□□□□□ -0.93
PRPF40B-212ENST00000551111 ZNF670-ZNF695F2Z2N8 137 aa9.26□□□□□ -0.93
PRPF40B-212ENST00000551111 PIN1P1O15428 100 aa9.26□□□□□ -0.93
PRPF40B-212ENST00000551111 CHRM2P08172 466 aa9.26□□□□□ -0.93
PRPF40B-212ENST00000551111 BCL3P20749 454 aa9.26□□□□□ -0.93
PRPF40B-212ENST00000551111 GDNFP39905 211 aa9.26□□□□□ -0.93
PRPF40B-212ENST00000551111 KIR3DL2P43630 455 aa9.26□□□□□ -0.93
PRPF40B-212ENST00000551111 SNU13P55769 128 aaKnown RBP9.26□□□□□ -0.93
PRPF40B-212ENST00000551111 ACTA2P62736 377 aa9.26□□□□□ -0.93
PRPF40B-212ENST00000551111 ACTG2P63267 376 aa9.26□□□□□ -0.93
PRPF40B-212ENST00000551111 ACTC1P68032 377 aa9.26□□□□□ -0.93
PRPF40B-212ENST00000551111 ACTA1P68133 377 aa9.26□□□□□ -0.93
PRPF40B-212ENST00000551111 NXNL2Q5VZ03 156 aa9.26□□□□□ -0.93
PRPF40B-212ENST00000551111 LIAT1Q6ZQX7 453 aa9.26□□□□□ -0.93
PRPF40B-212ENST00000551111 SLC25A26Q70HW3 274 aa9.26□□□□□ -0.93
PRPF40B-212ENST00000551111 NDUFA11Q86Y39 141 aa9.26□□□□□ -0.93
PRPF40B-212ENST00000551111 OR8H2Q8N162 312 aa9.26□□□□□ -0.93
PRPF40B-212ENST00000551111 YIPF7Q8N8F6 280 aa9.26□□□□□ -0.93
PRPF40B-212ENST00000551111 OR4S1Q8NGB4 309 aa9.26□□□□□ -0.93
PRPF40B-212ENST00000551111 OR13D1Q8NGV5 346 aa9.26□□□□□ -0.93
PRPF40B-212ENST00000551111 ITFG2Q969R8 447 aa9.26□□□□□ -0.93
PRPF40B-212ENST00000551111 NRBF2Q96F24 287 aa9.26□□□□□ -0.93
PRPF40B-212ENST00000551111 ZNF714Q96N38 554 aa9.26□□□□□ -0.93
PRPF40B-212ENST00000551111 TEX12Q9BXU0 123 aa9.26□□□□□ -0.93
PRPF40B-212ENST00000551111 RBFOX1Q9NWB1 397 aaKnown RBP9.26□□□□□ -0.93
PRPF40B-212ENST00000551111 IGHV2-26A0A0B4J1V2 119 aa9.25□□□□□ -0.93
PRPF40B-212ENST00000551111 hCG_1809904A0A1W2PP81 198 aa9.25□□□□□ -0.93
PRPF40B-212ENST00000551111 A0A1W2PPE2 198 aa9.25□□□□□ -0.93
PRPF40B-212ENST00000551111 A0A1W2PR64 198 aa9.25□□□□□ -0.93
PRPF40B-212ENST00000551111 A0A1W2PRV1 198 aa9.25□□□□□ -0.93
PRPF40B-212ENST00000551111 FAM172BPA6NC97 362 aa9.25□□□□□ -0.93
PRPF40B-212ENST00000551111 DHRS7CA6NNS2 312 aa9.25□□□□□ -0.93
PRPF40B-212ENST00000551111 FAM90A22PA8MWA6 464 aa9.25□□□□□ -0.93
PRPF40B-212ENST00000551111 GYG2O15488 501 aa9.25□□□□□ -0.93
PRPF40B-212ENST00000551111 SYT7O43581 403 aa9.25□□□□□ -0.93
PRPF40B-212ENST00000551111 IGLL1P15814 213 aa9.25□□□□□ -0.93
PRPF40B-212ENST00000551111 CD83Q01151 205 aa9.25□□□□□ -0.93
PRPF40B-212ENST00000551111 EMX1Q04741 257 aaPredicted RBP9.25□□□□□ -0.93
PRPF40B-212ENST00000551111 SLC34A1Q06495 639 aa9.25□□□□□ -0.93
PRPF40B-212ENST00000551111 FOXB2Q5VYV0 432 aa9.25□□□□□ -0.93
PRPF40B-212ENST00000551111 KDM4DQ6B0I6 523 aa9.25□□□□□ -0.93
PRPF40B-212ENST00000551111 GDPD3Q7L5L3 318 aa9.25□□□□□ -0.93
PRPF40B-212ENST00000551111 AMIGO2Q86SJ2 522 aa9.25□□□□□ -0.93
PRPF40B-212ENST00000551111 EGFL6Q8IUX8 553 aa9.25□□□□□ -0.93
PRPF40B-212ENST00000551111 ZNF676Q8N7Q3 588 aa9.25□□□□□ -0.93
PRPF40B-212ENST00000551111 OR4P4Q8NGL7 312 aa9.25□□□□□ -0.93
PRPF40B-212ENST00000551111 SGCDQ92629 289 aa9.25□□□□□ -0.93
PRPF40B-212ENST00000551111 ADAT3Q96EY9 351 aaPredicted RBP9.25□□□□□ -0.93
PRPF40B-212ENST00000551111 SNX22Q96L94 193 aa9.25□□□□□ -0.93
PRPF40B-212ENST00000551111 PRSS22Q9GZN4 317 aa9.25□□□□□ -0.93
PRPF40B-212ENST00000551111 MOB1AQ9H8S9 216 aa9.25□□□□□ -0.93
PRPF40B-212ENST00000551111 ABCB10Q9NRK6 738 aa9.25□□□□□ -0.93
PRPF40B-212ENST00000551111 KRT84Q9NSB2 600 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 101.1 ms