RNA–Protein interactions for RNA: ENST00000539661.5

RAB40C-205, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 3 BASIC

Gene RAB40C, Length 2,609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-205ENST00000539661 PTBP3O95758 552 aaKnown RBP15.37■□□□□ 0.05
RAB40C-205ENST00000539661 FCGR2AP12318 317 aa15.37■□□□□ 0.05
RAB40C-205ENST00000539661 ANOS1P23352 680 aa15.37■□□□□ 0.05
RAB40C-205ENST00000539661 GLIPR1P48060 266 aa15.37■□□□□ 0.05
RAB40C-205ENST00000539661 RND3P61587 244 aa15.37■□□□□ 0.05
RAB40C-205ENST00000539661 DLK1P80370 383 aa15.37■□□□□ 0.05
RAB40C-205ENST00000539661 CDPF1Q6NVV7 123 aa15.37■□□□□ 0.05
RAB40C-205ENST00000539661 SPNS3Q6ZMD2 512 aa15.37■□□□□ 0.05
RAB40C-205ENST00000539661 ZNF429Q86V71 674 aa15.37■□□□□ 0.05
RAB40C-205ENST00000539661 CCDC54Q8NEL0 328 aa15.37■□□□□ 0.05
RAB40C-205ENST00000539661 OR52M1Q8NGK5 317 aa15.37■□□□□ 0.05
RAB40C-205ENST00000539661 OR4D5Q8NGN0 318 aa15.37■□□□□ 0.05
RAB40C-205ENST00000539661 OR2G3Q8NGZ4 309 aa15.37■□□□□ 0.05
RAB40C-205ENST00000539661 OR14L1PQ8NHC6 308 aa15.37■□□□□ 0.05
RAB40C-205ENST00000539661 S100PBPQ96BU1 408 aa15.37■□□□□ 0.05
RAB40C-205ENST00000539661 C10orf35Q96D05 121 aa15.37■□□□□ 0.05
RAB40C-205ENST00000539661 MSI2Q96DH6 328 aaKnown RBP15.37■□□□□ 0.05
RAB40C-205ENST00000539661 CLEC1BQ9P126 229 aa15.37■□□□□ 0.05
RAB40C-205ENST00000539661 A0A0U1RQV5 110 aa15.36■□□□□ 0.05
RAB40C-205ENST00000539661 B4DEV8 164 aa15.36■□□□□ 0.05
RAB40C-205ENST00000539661 PITX3O75364 302 aa15.36■□□□□ 0.05
RAB40C-205ENST00000539661 IGHV4-34P06331 123 aa15.36■□□□□ 0.05
RAB40C-205ENST00000539661 CDAP32320 146 aa15.36■□□□□ 0.05
RAB40C-205ENST00000539661 FOXF1Q12946 379 aa15.36■□□□□ 0.05
RAB40C-205ENST00000539661 SP5Q6BEB4 398 aaPredicted RBP15.36■□□□□ 0.05
RAB40C-205ENST00000539661 OGFOD3Q6PK18 319 aa15.36■□□□□ 0.05
RAB40C-205ENST00000539661 Q6ZSR3 168 aa15.36■□□□□ 0.05
RAB40C-205ENST00000539661 M1APQ8TC57 530 aa15.36■□□□□ 0.05
RAB40C-205ENST00000539661 PIGQQ9BRB3 760 aa15.36■□□□□ 0.05
RAB40C-205ENST00000539661 HIPK2Q9H2X6 1198 aa15.36■□□□□ 0.05
RAB40C-205ENST00000539661 LIME1Q9H400 295 aa15.36■□□□□ 0.05
RAB40C-205ENST00000539661 A0A1B0GV50 99 aa15.36■□□□□ 0.05
RAB40C-205ENST00000539661 FAM230AA0A1W2PPH8 454 aa15.36■□□□□ 0.05
RAB40C-205ENST00000539661 H3BMH7 237 aa15.36■□□□□ 0.05
RAB40C-205ENST00000539661 DHRS3O75911 302 aa15.36■□□□□ 0.05
RAB40C-205ENST00000539661 FOSL2P15408 326 aa15.36■□□□□ 0.05
RAB40C-205ENST00000539661 CSNK1A1P48729 337 aa15.36■□□□□ 0.05
RAB40C-205ENST00000539661 CCL20P78556 96 aa15.36■□□□□ 0.05
RAB40C-205ENST00000539661 ZNF506Q5JVG8 444 aa15.36■□□□□ 0.05
RAB40C-205ENST00000539661 FBXL14Q8N1E6 418 aa15.36■□□□□ 0.05
RAB40C-205ENST00000539661 OR6X1Q8NH79 312 aa15.36■□□□□ 0.05
RAB40C-205ENST00000539661 TOMM40LQ969M1 308 aa15.36■□□□□ 0.05
RAB40C-205ENST00000539661 LYZL4Q96KX0 146 aa15.36■□□□□ 0.05
RAB40C-205ENST00000539661 NIPSNAP3BQ9BS92 247 aa15.36■□□□□ 0.05
RAB40C-205ENST00000539661 LRRC61Q9BV99 259 aa15.36■□□□□ 0.05
RAB40C-205ENST00000539661 C11orf1Q9H5F2 150 aa15.36■□□□□ 0.05
RAB40C-205ENST00000539661 OR5H15A6NDH6 313 aa15.35■□□□□ 0.05
RAB40C-205ENST00000539661 OR5H1A6NKK0 313 aa15.35■□□□□ 0.05
RAB40C-205ENST00000539661 ZNF850A8MQ14 1090 aa15.35■□□□□ 0.05
RAB40C-205ENST00000539661 TSTD3H0UI37 97 aa15.35■□□□□ 0.05
RAB40C-205ENST00000539661 HSPA12AO43301 675 aa15.35■□□□□ 0.05
RAB40C-205ENST00000539661 GABRR1P24046 479 aa15.35■□□□□ 0.05
RAB40C-205ENST00000539661 GFERP55789 205 aa15.35■□□□□ 0.05
RAB40C-205ENST00000539661 UCP3P55916 312 aa15.35■□□□□ 0.05
RAB40C-205ENST00000539661 ERVFRD-1P60508 538 aa15.35■□□□□ 0.05
RAB40C-205ENST00000539661 MRPS21P82921 87 aaKnown RBP15.35■□□□□ 0.05
RAB40C-205ENST00000539661 MFAP5Q13361 173 aa15.35■□□□□ 0.05
RAB40C-205ENST00000539661 RSU1Q15404 277 aa15.35■□□□□ 0.05
RAB40C-205ENST00000539661 LBHQ53QV2 105 aaPredicted RBP15.35■□□□□ 0.05
RAB40C-205ENST00000539661 OR2C3Q8N628 320 aa15.35■□□□□ 0.05
RAB40C-205ENST00000539661 NPRL2Q8WTW4 380 aa15.35■□□□□ 0.05
RAB40C-205ENST00000539661 HDHD3Q9BSH5 251 aaPredicted RBP15.35■□□□□ 0.05
RAB40C-205ENST00000539661 ELL3Q9HB65 397 aaPredicted RBP15.35■□□□□ 0.05
RAB40C-205ENST00000539661 THADAQ6YHU6 1953 aa15.35■□□□□ 0.05
RAB40C-205ENST00000539661 ARGFXA6NJG6 315 aa15.35■□□□□ 0.05
RAB40C-205ENST00000539661 ATP6V0CP27449 155 aa15.35■□□□□ 0.05
RAB40C-205ENST00000539661 CCR5P51681 352 aa15.35■□□□□ 0.05
RAB40C-205ENST00000539661 TMEM176BQ3YBM2 270 aaPredicted RBP15.35■□□□□ 0.05
RAB40C-205ENST00000539661 ZNF343Q6P1L6 599 aa15.35■□□□□ 0.05
RAB40C-205ENST00000539661 SLC22A25Q6T423 547 aa15.35■□□□□ 0.05
RAB40C-205ENST00000539661 STX12Q86Y82 276 aa15.35■□□□□ 0.05
RAB40C-205ENST00000539661 RNASE11Q8TAA1 199 aaKnown RBP15.35■□□□□ 0.05
RAB40C-205ENST00000539661 RBMXL1Q96E39 390 aaKnown RBP15.35■□□□□ 0.05
RAB40C-205ENST00000539661 LIN37Q96GY3 246 aaPredicted RBP15.35■□□□□ 0.05
RAB40C-205ENST00000539661 SLC2A9Q9NRM0 540 aa15.35■□□□□ 0.05
RAB40C-205ENST00000539661 AK3Q9UIJ7 227 aa15.35■□□□□ 0.05
RAB40C-205ENST00000539661 VDAC3Q9Y277 283 aa15.35■□□□□ 0.05
RAB40C-205ENST00000539661 MED19A0JLT2 244 aaPredicted RBP15.34■□□□□ 0.05
RAB40C-205ENST00000539661 H3BML4 177 aa15.34■□□□□ 0.05
RAB40C-205ENST00000539661 MSTNO14793 375 aa15.34■□□□□ 0.05
RAB40C-205ENST00000539661 SCAF4O95104 1147 aaKnown RBP15.34■□□□□ 0.05
RAB40C-205ENST00000539661 CDS2O95674 445 aa15.34■□□□□ 0.05
RAB40C-205ENST00000539661 SOD3P08294 240 aa15.34■□□□□ 0.05
RAB40C-205ENST00000539661 DDTP30046 118 aa15.34■□□□□ 0.05
RAB40C-205ENST00000539661 CTHP32929 405 aa15.34■□□□□ 0.05
RAB40C-205ENST00000539661 HIST3H3Q16695 136 aa15.34■□□□□ 0.05
RAB40C-205ENST00000539661 KHDC3LQ587J8 217 aa15.34■□□□□ 0.05
RAB40C-205ENST00000539661 SLC25A53Q5H9E4 307 aa15.34■□□□□ 0.05
RAB40C-205ENST00000539661 CCDC71LQ8N9Z2 235 aa15.34■□□□□ 0.05
RAB40C-205ENST00000539661 OR10G4Q8NGN3 311 aa15.34■□□□□ 0.05
RAB40C-205ENST00000539661 SLC31A2O15432 143 aa15.34■□□□□ 0.05
RAB40C-205ENST00000539661 TRAF3IP2O43734 574 aaPredicted RBP15.34■□□□□ 0.05
RAB40C-205ENST00000539661 FBLP22087 321 aaKnown RBP15.34■□□□□ 0.05
RAB40C-205ENST00000539661 MYBPHQ13203 477 aa15.34■□□□□ 0.05
RAB40C-205ENST00000539661 SMAD4Q13485 552 aaKnown RBP15.34■□□□□ 0.05
RAB40C-205ENST00000539661 ICAM4Q14773 271 aa15.34■□□□□ 0.05
RAB40C-205ENST00000539661 TMEM92Q6UXU6 159 aa15.34■□□□□ 0.05
RAB40C-205ENST00000539661 RHOVQ96L33 236 aa15.34■□□□□ 0.05
RAB40C-205ENST00000539661 MRGPRX4Q96LA9 322 aa15.34■□□□□ 0.05
RAB40C-205ENST00000539661 GPR61Q9BZJ8 451 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms