RNA–Protein interactions for RNA: ENST00000536107.5

YBX3-205, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 438 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-205ENST00000536107 NLKQ9UBE8 527 aa2.89□□□□□ -1.95
YBX3-205ENST00000536107 MRPS28Q9Y2Q9 187 aaKnown RBP2.89□□□□□ -1.95
YBX3-205ENST00000536107 POLR1DQ9Y2S0 133 aa2.89□□□□□ -1.95
YBX3-205ENST00000536107 IGHV2-26A0A0B4J1V2 119 aa2.88□□□□□ -1.95
YBX3-205ENST00000536107 A0A1W2PPI3 338 aa2.88□□□□□ -1.95
YBX3-205ENST00000536107 IZUMO1RA6ND01 250 aa2.88□□□□□ -1.95
YBX3-205ENST00000536107 ARRDC5A6NEK1 342 aa2.88□□□□□ -1.95
YBX3-205ENST00000536107 MSGN1A6NI15 193 aa2.88□□□□□ -1.95
YBX3-205ENST00000536107 FAM159BA6NKW6 160 aa2.88□□□□□ -1.95
YBX3-205ENST00000536107 ANKRD30BLA7E2S9 258 aa2.88□□□□□ -1.95
YBX3-205ENST00000536107 C17orf98A8MV24 154 aa2.88□□□□□ -1.95
YBX3-205ENST00000536107 F5H5K5 113 aa2.88□□□□□ -1.95
YBX3-205ENST00000536107 SLC1A7O00341 560 aa2.88□□□□□ -1.95
YBX3-205ENST00000536107 HMGN4O00479 90 aa2.88□□□□□ -1.95
YBX3-205ENST00000536107 KPNA4O00629 521 aaPredicted RBP2.88□□□□□ -1.95
YBX3-205ENST00000536107 DLGAP1O14490 977 aa2.88□□□□□ -1.95
YBX3-205ENST00000536107 TOR1AO14656 332 aa2.88□□□□□ -1.95
YBX3-205ENST00000536107 POLR3GO15318 223 aaPredicted RBP2.88□□□□□ -1.95
YBX3-205ENST00000536107 FGF16O43320 207 aa2.88□□□□□ -1.95
YBX3-205ENST00000536107 AKR7A2O43488 359 aa2.88□□□□□ -1.95
YBX3-205ENST00000536107 TGOLN2O43493 480 aa2.88□□□□□ -1.95
YBX3-205ENST00000536107 LYPD3O95274 346 aa2.88□□□□□ -1.95
YBX3-205ENST00000536107 ZNF823P16415 610 aa2.88□□□□□ -1.95
YBX3-205ENST00000536107 GLRA1P23415 457 aa2.88□□□□□ -1.95
YBX3-205ENST00000536107 RFTN2Q52LD8 501 aaPredicted RBP2.88□□□□□ -1.95
YBX3-205ENST00000536107 OTPQ5XKR4 325 aa2.88□□□□□ -1.95
YBX3-205ENST00000536107 PVRIGQ6DKI7 326 aa2.88□□□□□ -1.95
YBX3-205ENST00000536107 SLC25A47Q6Q0C1 308 aa2.88□□□□□ -1.95
YBX3-205ENST00000536107 CALHM1Q8IU99 346 aa2.88□□□□□ -1.95
YBX3-205ENST00000536107 C11orf53Q8IXP5 236 aa2.88□□□□□ -1.95
YBX3-205ENST00000536107 KRTCAP2Q8N6L1 136 aa2.88□□□□□ -1.95
YBX3-205ENST00000536107 OR56B4Q8NH76 319 aa2.88□□□□□ -1.95
YBX3-205ENST00000536107 SVIPQ8NHG7 77 aa2.88□□□□□ -1.95
YBX3-205ENST00000536107 MOSPD2Q8NHP6 518 aa2.88□□□□□ -1.95
YBX3-205ENST00000536107 ZNF596Q8TC21 504 aa2.88□□□□□ -1.95
YBX3-205ENST00000536107 MIPOL1Q8TD10 442 aa2.88□□□□□ -1.95
YBX3-205ENST00000536107 TMEM19Q96HH6 336 aa2.88□□□□□ -1.95
YBX3-205ENST00000536107 RASL11BQ9BPW5 248 aa2.88□□□□□ -1.95
YBX3-205ENST00000536107 MRPL57Q9BQC6 102 aaKnown RBP2.88□□□□□ -1.95
YBX3-205ENST00000536107 DESI2Q9BSY9 194 aa2.88□□□□□ -1.95
YBX3-205ENST00000536107 NUAK2Q9H093 628 aa2.88□□□□□ -1.95
YBX3-205ENST00000536107 TMEM133Q9H2Q1 129 aa2.88□□□□□ -1.95
YBX3-205ENST00000536107 RERGLQ9H628 205 aa2.88□□□□□ -1.95
YBX3-205ENST00000536107 TMEM27Q9HBJ8 222 aa2.88□□□□□ -1.95
YBX3-205ENST00000536107 TP53TG1Q9Y2A0 90 aa2.88□□□□□ -1.95
YBX3-205ENST00000536107 TMED5Q9Y3A6 229 aa2.88□□□□□ -1.95
YBX3-205ENST00000536107 FIS1Q9Y3D6 152 aa2.88□□□□□ -1.95
YBX3-205ENST00000536107 PKHD1L1Q86WI1 4243 aa2.87□□□□□ -1.95
YBX3-205ENST00000536107 OR6C68A6NDL8 312 aa2.87□□□□□ -1.95
YBX3-205ENST00000536107 C11orf94C9JXX5 98 aa2.87□□□□□ -1.95
YBX3-205ENST00000536107 RER1O15258 196 aa2.87□□□□□ -1.95
YBX3-205ENST00000536107 RENP00797 406 aa2.87□□□□□ -1.95
YBX3-205ENST00000536107 IGLV2-11P01706 119 aa2.87□□□□□ -1.95
YBX3-205ENST00000536107 IGHV3-11P01762 117 aa2.87□□□□□ -1.95
YBX3-205ENST00000536107 MBPP02686 304 aaPredicted RBP2.87□□□□□ -1.95
YBX3-205ENST00000536107 HSPB1P04792 205 aaKnown RBP2.87□□□□□ -1.95
YBX3-205ENST00000536107 LGALS1P09382 135 aaKnown RBP2.87□□□□□ -1.95
YBX3-205ENST00000536107 LINC00032P0C843 101 aa2.87□□□□□ -1.95
YBX3-205ENST00000536107 PSG2P11465 335 aa2.87□□□□□ -1.95
YBX3-205ENST00000536107 GPR4P46093 362 aa2.87□□□□□ -1.95
YBX3-205ENST00000536107 RAB9AP51151 201 aa2.87□□□□□ -1.95
YBX3-205ENST00000536107 ZNF133P52736 654 aaPredicted RBP2.87□□□□□ -1.95
YBX3-205ENST00000536107 UGT2B15P54855 530 aa2.87□□□□□ -1.95
YBX3-205ENST00000536107 APOC4P55056 127 aa2.87□□□□□ -1.95
YBX3-205ENST00000536107 XGP55808 180 aa2.87□□□□□ -1.95
YBX3-205ENST00000536107 EDDM3BP56851 147 aa2.87□□□□□ -1.95
YBX3-205ENST00000536107 ESRRGP62508 458 aa2.87□□□□□ -1.95
YBX3-205ENST00000536107 GFOD2Q3B7J2 385 aa2.87□□□□□ -1.95
YBX3-205ENST00000536107 FGD3Q5JSP0 725 aa2.87□□□□□ -1.95
YBX3-205ENST00000536107 RNF220Q5VTB9 566 aa2.87□□□□□ -1.95
YBX3-205ENST00000536107 SMARCD3Q6STE5 483 aa2.87□□□□□ -1.95
YBX3-205ENST00000536107 Q6ZR54 194 aa2.87□□□□□ -1.95
YBX3-205ENST00000536107 SLC16A13Q7RTY0 426 aa2.87□□□□□ -1.95
YBX3-205ENST00000536107 ANKRD46Q86W74 232 aa2.87□□□□□ -1.95
YBX3-205ENST00000536107 ABHD12Q8N2K0 398 aa2.87□□□□□ -1.95
YBX3-205ENST00000536107 OR4P4Q8NGL7 312 aa2.87□□□□□ -1.95
YBX3-205ENST00000536107 HDAC2Q92769 488 aaKnown RBP2.87□□□□□ -1.95
YBX3-205ENST00000536107 RPL3LQ92901 407 aaKnown RBP2.87□□□□□ -1.95
YBX3-205ENST00000536107 CREB3L1Q96BA8 519 aa2.87□□□□□ -1.95
YBX3-205ENST00000536107 SGTBQ96EQ0 304 aa2.87□□□□□ -1.95
YBX3-205ENST00000536107 ZNF714Q96N38 554 aa2.87□□□□□ -1.95
YBX3-205ENST00000536107 MICU1Q9BPX6 476 aa2.87□□□□□ -1.95
YBX3-205ENST00000536107 SLC35A5Q9BS91 424 aa2.87□□□□□ -1.95
YBX3-205ENST00000536107 ALG12Q9BV10 488 aa2.87□□□□□ -1.95
YBX3-205ENST00000536107 TOLLIPQ9H0E2 274 aa2.87□□□□□ -1.95
YBX3-205ENST00000536107 POLE4Q9NR33 117 aa2.87□□□□□ -1.95
YBX3-205ENST00000536107 INIPQ9NRY2 104 aa2.87□□□□□ -1.95
YBX3-205ENST00000536107 CALML5Q9NZT1 146 aa2.87□□□□□ -1.95
YBX3-205ENST00000536107 PYCARDQ9ULZ3 195 aa2.87□□□□□ -1.95
YBX3-205ENST00000536107 HHLA2Q9UM44 414 aa2.87□□□□□ -1.95
YBX3-205ENST00000536107 IFT52Q9Y366 437 aa2.87□□□□□ -1.95
YBX3-205ENST00000536107 N6AMT1Q9Y5N5 214 aa2.87□□□□□ -1.95
YBX3-205ENST00000536107 SESN1Q9Y6P5 492 aa2.87□□□□□ -1.95
YBX3-205ENST00000536107 FSIP2Q5CZC0 6907 aa2.87□□□□□ -1.95
YBX3-205ENST00000536107 IGKV1D-17A0A075B6S4 117 aa2.86□□□□□ -1.95
YBX3-205ENST00000536107 FAM172BPA6NC97 362 aa2.86□□□□□ -1.95
YBX3-205ENST00000536107 TMEM247A6NEH6 219 aa2.86□□□□□ -1.95
YBX3-205ENST00000536107 ARPC1BO15143 372 aaKnown RBP2.86□□□□□ -1.95
YBX3-205ENST00000536107 DEFB4AO15263 64 aa2.86□□□□□ -1.95
YBX3-205ENST00000536107 RGS10O43665 173 aa2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 146 ms