RNA–Protein interactions for RNA: ENST00000517434.2

PCDHGA6-201, Transcript of protocadherin gamma subfamily A, 6, humanhuman

TSL 1 (best) BASIC

Gene PCDHGA6, Length 4,775 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6-201ENST00000517434 PQLC2LA1A4F0 135 aa10.93□□□□□ -0.66
PCDHGA6-201ENST00000517434 C9orf170A2RU37 121 aa10.93□□□□□ -0.66
PCDHGA6-201ENST00000517434 DBX1A6NMT0 343 aa10.93□□□□□ -0.66
PCDHGA6-201ENST00000517434 KIAA1324LA8MWY0 1029 aaPredicted RBP10.93□□□□□ -0.66
PCDHGA6-201ENST00000517434 TNFSF11O14788 317 aa10.93□□□□□ -0.66
PCDHGA6-201ENST00000517434 GALR2O43603 387 aaPredicted RBP10.93□□□□□ -0.66
PCDHGA6-201ENST00000517434 SFT2D2O95562 160 aa10.93□□□□□ -0.66
PCDHGA6-201ENST00000517434 FTH1P19P0C7X4 201 aa10.93□□□□□ -0.66
PCDHGA6-201ENST00000517434 DUSP2Q05923 314 aa10.93□□□□□ -0.66
PCDHGA6-201ENST00000517434 COX19Q49B96 90 aa10.93□□□□□ -0.66
PCDHGA6-201ENST00000517434 DPPA3Q6W0C5 159 aa10.93□□□□□ -0.66
PCDHGA6-201ENST00000517434 RNF165Q6ZSG1 346 aa10.93□□□□□ -0.66
PCDHGA6-201ENST00000517434 FA2HQ7L5A8 372 aa10.93□□□□□ -0.66
PCDHGA6-201ENST00000517434 CNRIP1Q96F85 164 aaPredicted RBP10.93□□□□□ -0.66
PCDHGA6-201ENST00000517434 S1PR3Q99500 378 aa10.93□□□□□ -0.66
PCDHGA6-201ENST00000517434 RAB33BQ9H082 229 aa10.93□□□□□ -0.66
PCDHGA6-201ENST00000517434 RAB1BQ9H0U4 201 aa10.93□□□□□ -0.66
PCDHGA6-201ENST00000517434 ATAD5Q96QE3 1844 aa10.93□□□□□ -0.66
PCDHGA6-201ENST00000517434 SCN1AP35498 2009 aa10.93□□□□□ -0.66
PCDHGA6-201ENST00000517434 TMIGD3P0DMS9 266 aaPredicted RBP10.93□□□□□ -0.66
PCDHGA6-201ENST00000517434 CD99P14209 185 aa10.93□□□□□ -0.66
PCDHGA6-201ENST00000517434 CD96P40200 585 aa10.93□□□□□ -0.66
PCDHGA6-201ENST00000517434 SMIM21Q3B7S5 101 aa10.93□□□□□ -0.66
PCDHGA6-201ENST00000517434 SLC36A1Q7Z2H8 476 aa10.93□□□□□ -0.66
PCDHGA6-201ENST00000517434 OR2I1PQ8NGU4 316 aa10.93□□□□□ -0.66
PCDHGA6-201ENST00000517434 C5orf49A4QMS7 147 aa10.93□□□□□ -0.66
PCDHGA6-201ENST00000517434 MFSD2BA6NFX1 497 aa10.93□□□□□ -0.66
PCDHGA6-201ENST00000517434 YIF1AO95070 293 aa10.93□□□□□ -0.66
PCDHGA6-201ENST00000517434 SCGB1C2P0DMR2 95 aa10.93□□□□□ -0.66
PCDHGA6-201ENST00000517434 ELOBQ15370 118 aa10.93□□□□□ -0.66
PCDHGA6-201ENST00000517434 EMC6Q9BV81 110 aa10.93□□□□□ -0.66
PCDHGA6-201ENST00000517434 TMEM191AQ9H0A3 160 aa10.93□□□□□ -0.66
PCDHGA6-201ENST00000517434 MIXL1Q9H2W2 232 aa10.93□□□□□ -0.66
PCDHGA6-201ENST00000517434 LOC105371267A0A1B0GV96 52 aa10.92□□□□□ -0.66
PCDHGA6-201ENST00000517434 PRSS37A4D1T9 235 aa10.92□□□□□ -0.66
PCDHGA6-201ENST00000517434 AQP7P3A6NL99 342 aa10.92□□□□□ -0.66
PCDHGA6-201ENST00000517434 RPL18Q07020 188 aaKnown RBP10.92□□□□□ -0.66
PCDHGA6-201ENST00000517434 ZNF385BQ569K4 471 aa10.92□□□□□ -0.66
PCDHGA6-201ENST00000517434 WIPI1Q5MNZ9 446 aaPredicted RBP10.92□□□□□ -0.66
PCDHGA6-201ENST00000517434 ZNF385CQ66K41 422 aaPredicted RBP10.92□□□□□ -0.66
PCDHGA6-201ENST00000517434 VASH2Q86V25 355 aa10.92□□□□□ -0.66
PCDHGA6-201ENST00000517434 LRP11Q86VZ4 500 aa10.92□□□□□ -0.66
PCDHGA6-201ENST00000517434 ORAI1Q96D31 301 aa10.92□□□□□ -0.66
PCDHGA6-201ENST00000517434 DDA1Q9BW61 102 aa10.92□□□□□ -0.66
PCDHGA6-201ENST00000517434 MAP1LC3B2A6NCE7 125 aa10.92□□□□□ -0.66
PCDHGA6-201ENST00000517434 FAM74A7A6NL05 159 aa10.92□□□□□ -0.66
PCDHGA6-201ENST00000517434 IGF2P01344 180 aa10.92□□□□□ -0.66
PCDHGA6-201ENST00000517434 HPXP02790 462 aa10.92□□□□□ -0.66
PCDHGA6-201ENST00000517434 GLRA1P23415 457 aa10.92□□□□□ -0.66
PCDHGA6-201ENST00000517434 FAM74A3Q4VXF1 159 aa10.92□□□□□ -0.66
PCDHGA6-201ENST00000517434 RNASEKQ6P5S7 137 aaKnown RBP10.92□□□□□ -0.66
PCDHGA6-201ENST00000517434 REC114Q7Z4M0 266 aa10.92□□□□□ -0.66
PCDHGA6-201ENST00000517434 ARL6IP6Q8N6S5 226 aa10.92□□□□□ -0.66
PCDHGA6-201ENST00000517434 OR5AU1Q8NGC0 362 aa10.92□□□□□ -0.66
PCDHGA6-201ENST00000517434 SIGLEC11Q96RL6 698 aa10.92□□□□□ -0.66
PCDHGA6-201ENST00000517434 MAP1LC3BQ9GZQ8 125 aa10.92□□□□□ -0.66
PCDHGA6-201ENST00000517434 AMDHD2Q9Y303 409 aa10.92□□□□□ -0.66
PCDHGA6-201ENST00000517434 TMED3Q9Y3Q3 217 aa10.92□□□□□ -0.66
PCDHGA6-201ENST00000517434 SERPINE3A8MV23 424 aa10.92□□□□□ -0.66
PCDHGA6-201ENST00000517434 CD3EP07766 207 aa10.92□□□□□ -0.66
PCDHGA6-201ENST00000517434 IAPPP10997 89 aa10.92□□□□□ -0.66
PCDHGA6-201ENST00000517434 FAHD2BQ6P2I3 314 aaPredicted RBP10.92□□□□□ -0.66
PCDHGA6-201ENST00000517434 OR4S1Q8NGB4 309 aa10.92□□□□□ -0.66
PCDHGA6-201ENST00000517434 FAHD2AQ96GK7 314 aa10.92□□□□□ -0.66
PCDHGA6-201ENST00000517434 FOXB1Q99853 325 aa10.92□□□□□ -0.66
PCDHGA6-201ENST00000517434 ZNF71Q9NQZ8 489 aaPredicted RBP10.92□□□□□ -0.66
PCDHGA6-201ENST00000517434 NAT8Q9UHE5 227 aa10.92□□□□□ -0.66
PCDHGA6-201ENST00000517434 DOCK5Q9H7D0 1870 aa10.92□□□□□ -0.66
PCDHGA6-201ENST00000517434 SERTM1A2A2V5 107 aa10.92□□□□□ -0.66
PCDHGA6-201ENST00000517434 ALG1L2C9J202 215 aa10.92□□□□□ -0.66
PCDHGA6-201ENST00000517434 M0QZ24 198 aa10.92□□□□□ -0.66
PCDHGA6-201ENST00000517434 MASP2O00187 686 aa10.92□□□□□ -0.66
PCDHGA6-201ENST00000517434 MOSPD3O75425 235 aa10.92□□□□□ -0.66
PCDHGA6-201ENST00000517434 SLC25A6P12236 298 aa10.92□□□□□ -0.66
PCDHGA6-201ENST00000517434 EDDM3AQ14507 147 aa10.92□□□□□ -0.66
PCDHGA6-201ENST00000517434 PRAMEF5Q5TYX0 476 aa10.92□□□□□ -0.66
PCDHGA6-201ENST00000517434 PRAMEF6Q5VXH4 476 aa10.92□□□□□ -0.66
PCDHGA6-201ENST00000517434 PUSL1Q8N0Z8 303 aaKnown RBP10.92□□□□□ -0.66
PCDHGA6-201ENST00000517434 OR51F2Q8NH61 342 aa10.92□□□□□ -0.66
PCDHGA6-201ENST00000517434 KIF13BQ9NQT8 1826 aa10.91□□□□□ -0.66
PCDHGA6-201ENST00000517434 FAM90A27PA6NNH2 459 aa10.91□□□□□ -0.66
PCDHGA6-201ENST00000517434 OR7C2O60412 319 aa10.91□□□□□ -0.66
PCDHGA6-201ENST00000517434 CNIH1O95406 144 aa10.91□□□□□ -0.66
PCDHGA6-201ENST00000517434 IGHA1P01876 353 aa10.91□□□□□ -0.66
PCDHGA6-201ENST00000517434 Q8IYB0 196 aa10.91□□□□□ -0.66
PCDHGA6-201ENST00000517434 MYOZ1Q9NP98 299 aaPredicted RBP10.91□□□□□ -0.66
PCDHGA6-201ENST00000517434 ASB1Q9Y576 335 aa10.91□□□□□ -0.66
PCDHGA6-201ENST00000517434 A0A1B0GV90 55 aa10.91□□□□□ -0.66
PCDHGA6-201ENST00000517434 ASPDHA6ND91 283 aa10.91□□□□□ -0.66
PCDHGA6-201ENST00000517434 A6NDN8 102 aa10.91□□□□□ -0.66
PCDHGA6-201ENST00000517434 CRHP06850 196 aa10.91□□□□□ -0.66
PCDHGA6-201ENST00000517434 PGA3P0DJD8 388 aa10.91□□□□□ -0.66
PCDHGA6-201ENST00000517434 NHLH1Q02575 133 aa10.91□□□□□ -0.66
PCDHGA6-201ENST00000517434 ZNF79Q15937 498 aa10.91□□□□□ -0.66
PCDHGA6-201ENST00000517434 UBE3DQ7Z6J8 389 aa10.91□□□□□ -0.66
PCDHGA6-201ENST00000517434 ZNF764Q96H86 408 aaPredicted RBP10.91□□□□□ -0.66
PCDHGA6-201ENST00000517434 SLC35E1Q96K37 410 aa10.91□□□□□ -0.66
PCDHGA6-201ENST00000517434 LIN7CQ9NUP9 197 aaKnown RBP10.91□□□□□ -0.66
PCDHGA6-201ENST00000517434 TREM2Q9NZC2 230 aa10.91□□□□□ -0.66
PCDHGA6-201ENST00000517434 PAM16Q9Y3D7 125 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms