RNA–Protein interactions for RNA: ENST00000511263.1

HMGB3P13-201, Transcript of high mobility group box 3 pseudogene 13, humanhuman

BASIC

Gene HMGB3P13, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P13-201ENST00000511263 SULT1A1P50225 295 aa4□□□□□ -1.77
HMGB3P13-201ENST00000511263 POLR2HP52434 150 aaKnown RBP4□□□□□ -1.77
HMGB3P13-201ENST00000511263 HIST1H2BDP58876 126 aa4□□□□□ -1.77
HMGB3P13-201ENST00000511263 TAS2R41P59536 307 aa4□□□□□ -1.77
HMGB3P13-201ENST00000511263 HIST1H2BCP62807 126 aa4□□□□□ -1.77
HMGB3P13-201ENST00000511263 CRADDP78560 199 aa4□□□□□ -1.77
HMGB3P13-201ENST00000511263 MRPS34P82930 218 aaKnown RBP4□□□□□ -1.77
HMGB3P13-201ENST00000511263 HYAL1Q12794 435 aa4□□□□□ -1.77
HMGB3P13-201ENST00000511263 RBM39Q14498 530 aaKnown RBP4□□□□□ -1.77
HMGB3P13-201ENST00000511263 TMEM132DQ14C87 1099 aa4□□□□□ -1.77
HMGB3P13-201ENST00000511263 TPSAB1Q15661 275 aa4□□□□□ -1.77
HMGB3P13-201ENST00000511263 HIST2H2BEQ16778 126 aa4□□□□□ -1.77
HMGB3P13-201ENST00000511263 PCK2Q16822 640 aa4□□□□□ -1.77
HMGB3P13-201ENST00000511263 ZSWIM7Q19AV6 140 aa4□□□□□ -1.77
HMGB3P13-201ENST00000511263 HYAL4Q2M3T9 481 aa4□□□□□ -1.77
HMGB3P13-201ENST00000511263 TMEM176BQ3YBM2 270 aaPredicted RBP4□□□□□ -1.77
HMGB3P13-201ENST00000511263 ZNF789Q5FWF6 425 aa4□□□□□ -1.77
HMGB3P13-201ENST00000511263 RAB41Q5JT25 222 aa4□□□□□ -1.77
HMGB3P13-201ENST00000511263 HIST2H2BFQ5QNW6 126 aaPredicted RBP4□□□□□ -1.77
HMGB3P13-201ENST00000511263 ADNP2Q6IQ32 1131 aa4□□□□□ -1.77
HMGB3P13-201ENST00000511263 FAM71F2Q6NXP2 309 aa4□□□□□ -1.77
HMGB3P13-201ENST00000511263 RPL22L1Q6P5R6 122 aaKnown RBP4□□□□□ -1.77
HMGB3P13-201ENST00000511263 APOOLQ6UXV4 268 aa4□□□□□ -1.77
HMGB3P13-201ENST00000511263 FOXL2NBQ6ZUU3 175 aa4□□□□□ -1.77
HMGB3P13-201ENST00000511263 C9orf139Q6ZV77 190 aa4□□□□□ -1.77
HMGB3P13-201ENST00000511263 SLC25A26Q70HW3 274 aa4□□□□□ -1.77
HMGB3P13-201ENST00000511263 COX15Q7KZN9 410 aa4□□□□□ -1.77
HMGB3P13-201ENST00000511263 SLC36A1Q7Z2H8 476 aa4□□□□□ -1.77
HMGB3P13-201ENST00000511263 DPY19L4Q7Z388 723 aa4□□□□□ -1.77
HMGB3P13-201ENST00000511263 HAPLN4Q86UW8 402 aa4□□□□□ -1.77
HMGB3P13-201ENST00000511263 TMEM86AQ8N2M4 240 aa4□□□□□ -1.77
HMGB3P13-201ENST00000511263 FAM24BQ8N5W8 94 aa4□□□□□ -1.77
HMGB3P13-201ENST00000511263 HJURPQ8NCD3 748 aaPredicted RBP4□□□□□ -1.77
HMGB3P13-201ENST00000511263 SLC30A7Q8NEW0 376 aa4□□□□□ -1.77
HMGB3P13-201ENST00000511263 OR4B1Q8NGF8 309 aa4□□□□□ -1.77
HMGB3P13-201ENST00000511263 OR52E1Q8NGJ3 308 aa4□□□□□ -1.77
HMGB3P13-201ENST00000511263 OR5D16Q8NGK9 328 aa4□□□□□ -1.77
HMGB3P13-201ENST00000511263 OR10X1Q8NGY0 326 aa4□□□□□ -1.77
HMGB3P13-201ENST00000511263 RND1Q92730 232 aa4□□□□□ -1.77
HMGB3P13-201ENST00000511263 HIST1H2BHQ93079 126 aa4□□□□□ -1.77
HMGB3P13-201ENST00000511263 PIGTQ969N2 578 aa4□□□□□ -1.77
HMGB3P13-201ENST00000511263 ISOC2Q96AB3 205 aa4□□□□□ -1.77
HMGB3P13-201ENST00000511263 TMEM45BQ96B21 275 aa4□□□□□ -1.77
HMGB3P13-201ENST00000511263 GPR146Q96CH1 333 aa4□□□□□ -1.77
HMGB3P13-201ENST00000511263 HIST1H2BNQ99877 126 aa4□□□□□ -1.77
HMGB3P13-201ENST00000511263 HIST1H2BMQ99879 126 aa4□□□□□ -1.77
HMGB3P13-201ENST00000511263 ADAT1Q9BUB4 502 aaKnown RBP4□□□□□ -1.77
HMGB3P13-201ENST00000511263 NUDT9Q9BW91 350 aa4□□□□□ -1.77
HMGB3P13-201ENST00000511263 SELENOIQ9C0D9 397 aa4□□□□□ -1.77
HMGB3P13-201ENST00000511263 RBKSQ9H477 322 aa4□□□□□ -1.77
HMGB3P13-201ENST00000511263 SGK2Q9HBY8 427 aa4□□□□□ -1.77
HMGB3P13-201ENST00000511263 RAB18Q9NP72 206 aa4□□□□□ -1.77
HMGB3P13-201ENST00000511263 ACKR4Q9NPB9 350 aa4□□□□□ -1.77
HMGB3P13-201ENST00000511263 RBM22Q9NW64 420 aaKnown RBP eCLIP4□□□□□ -1.77
HMGB3P13-201ENST00000511263 GPATCH2LQ9NWQ4 482 aa4□□□□□ -1.77
HMGB3P13-201ENST00000511263 TAS2R14Q9NYV8 317 aa4□□□□□ -1.77
HMGB3P13-201ENST00000511263 TAS2R8Q9NYW2 309 aa4□□□□□ -1.77
HMGB3P13-201ENST00000511263 COMMD9Q9P000 198 aa4□□□□□ -1.77
HMGB3P13-201ENST00000511263 CACFD1Q9UGQ2 172 aa4□□□□□ -1.77
HMGB3P13-201ENST00000511263 FBXW11Q9UKB1 542 aa4□□□□□ -1.77
HMGB3P13-201ENST00000511263 TBX21Q9UL17 535 aa4□□□□□ -1.77
HMGB3P13-201ENST00000511263 HHLA2Q9UM44 414 aa4□□□□□ -1.77
HMGB3P13-201ENST00000511263 C14orf166Q9Y224 244 aaKnown RBP4□□□□□ -1.77
HMGB3P13-201ENST00000511263 OR51B2Q9Y5P1 312 aa4□□□□□ -1.77
HMGB3P13-201ENST00000511263 UTRNP46939 3433 aa4□□□□□ -1.77
HMGB3P13-201ENST00000511263 WDR81Q562E7 1941 aa3.99□□□□□ -1.77
HMGB3P13-201ENST00000511263 A0A1B0GTI1 187 aa3.99□□□□□ -1.77
HMGB3P13-201ENST00000511263 TMEM150BA6NC51 233 aa3.99□□□□□ -1.77
HMGB3P13-201ENST00000511263 ANKRD61A6NGH8 418 aa3.99□□□□□ -1.77
HMGB3P13-201ENST00000511263 TVP23AA6NH52 213 aa3.99□□□□□ -1.77
HMGB3P13-201ENST00000511263 OR5B21A6NL26 309 aa3.99□□□□□ -1.77
HMGB3P13-201ENST00000511263 IFITM5A6NNB3 132 aa3.99□□□□□ -1.77
HMGB3P13-201ENST00000511263 C15orf62A8K5M9 175 aa3.99□□□□□ -1.77
HMGB3P13-201ENST00000511263 IDSB3KWA1 339 aa3.99□□□□□ -1.77
HMGB3P13-201ENST00000511263 G3V4G9 280 aa3.99□□□□□ -1.77
HMGB3P13-201ENST00000511263 FAM72CH0Y354 149 aa3.99□□□□□ -1.77
HMGB3P13-201ENST00000511263 M0QZ24 198 aa3.99□□□□□ -1.77
HMGB3P13-201ENST00000511263 BMPR1BO00238 502 aa3.99□□□□□ -1.77
HMGB3P13-201ENST00000511263 GABRPO00591 440 aa3.99□□□□□ -1.77
HMGB3P13-201ENST00000511263 SDHDO14521 159 aa3.99□□□□□ -1.77
HMGB3P13-201ENST00000511263 PROSCO94903 275 aa3.99□□□□□ -1.77
HMGB3P13-201ENST00000511263 SIX3O95343 332 aaPredicted RBP3.99□□□□□ -1.77
HMGB3P13-201ENST00000511263 CNIH1O95406 144 aa3.99□□□□□ -1.77
HMGB3P13-201ENST00000511263 ACTL6AO96019 429 aa3.99□□□□□ -1.77
HMGB3P13-201ENST00000511263 CRYAAP02489 173 aa3.99□□□□□ -1.77
HMGB3P13-201ENST00000511263 VTNP04004 478 aa3.99□□□□□ -1.77
HMGB3P13-201ENST00000511263 SOD3P08294 240 aa3.99□□□□□ -1.77
HMGB3P13-201ENST00000511263 ESDP10768 282 aa3.99□□□□□ -1.77
HMGB3P13-201ENST00000511263 SELEP16581 610 aa3.99□□□□□ -1.77
HMGB3P13-201ENST00000511263 ZNF19P17023 458 aa3.99□□□□□ -1.77
HMGB3P13-201ENST00000511263 CEBPBP17676 345 aa3.99□□□□□ -1.77
HMGB3P13-201ENST00000511263 IDSP22304 550 aa3.99□□□□□ -1.77
HMGB3P13-201ENST00000511263 SRD5A2P31213 254 aa3.99□□□□□ -1.77
HMGB3P13-201ENST00000511263 APLNRP35414 380 aa3.99□□□□□ -1.77
HMGB3P13-201ENST00000511263 DCTP40126 519 aa3.99□□□□□ -1.77
HMGB3P13-201ENST00000511263 MFAP4P55083 255 aa3.99□□□□□ -1.77
HMGB3P13-201ENST00000511263 PLP1P60201 277 aa3.99□□□□□ -1.77
HMGB3P13-201ENST00000511263 S100A10P60903 97 aa3.99□□□□□ -1.77
HMGB3P13-201ENST00000511263 UBE2KP61086 200 aa3.99□□□□□ -1.77
HMGB3P13-201ENST00000511263 SNRPD1P62314 119 aaKnown RBP3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms