RNA–Protein interactions for RNA: ENST00000509277.5

LIMCH1-209, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 2 BASIC

Gene LIMCH1, Length 3,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-209ENST00000509277 FHL1Q13642 323 aa7.59□□□□□ -1.19
LIMCH1-209ENST00000509277 C11orf87Q6NUJ2 197 aa7.59□□□□□ -1.19
LIMCH1-209ENST00000509277 NUFIP2Q7Z417 695 aaKnown RBP7.59□□□□□ -1.19
LIMCH1-209ENST00000509277 PXKQ7Z7A4 578 aa7.59□□□□□ -1.19
LIMCH1-209ENST00000509277 ZNF679Q8IYX0 411 aa7.59□□□□□ -1.19
LIMCH1-209ENST00000509277 NECAP1Q8NC96 275 aa7.59□□□□□ -1.19
LIMCH1-209ENST00000509277 CMBLQ96DG6 245 aa7.59□□□□□ -1.19
LIMCH1-209ENST00000509277 WDYHV1Q96HA8 205 aa7.59□□□□□ -1.19
LIMCH1-209ENST00000509277 SNX22Q96L94 193 aa7.59□□□□□ -1.19
LIMCH1-209ENST00000509277 NRIP2Q9BQI9 281 aa7.59□□□□□ -1.19
LIMCH1-209ENST00000509277 ELL3Q9HB65 397 aaPredicted RBP7.59□□□□□ -1.19
LIMCH1-209ENST00000509277 B3GAT1Q9P2W7 334 aa7.59□□□□□ -1.19
LIMCH1-209ENST00000509277 OR5V1Q9UGF6 321 aa7.59□□□□□ -1.19
LIMCH1-209ENST00000509277 PRSS50Q9UI38 385 aa7.59□□□□□ -1.19
LIMCH1-209ENST00000509277 KCNG2Q9UJ96 466 aa7.59□□□□□ -1.19
LIMCH1-209ENST00000509277 SLC31A2O15432 143 aa7.58□□□□□ -1.2
LIMCH1-209ENST00000509277 TRAF3IP2O43734 574 aaPredicted RBP7.58□□□□□ -1.2
LIMCH1-209ENST00000509277 RAD51DO75771 328 aa7.58□□□□□ -1.2
LIMCH1-209ENST00000509277 GLSO94925 669 aaPredicted RBP7.58□□□□□ -1.2
LIMCH1-209ENST00000509277 AKAIN1P0CW23 69 aa7.58□□□□□ -1.2
LIMCH1-209ENST00000509277 ZNF708P17019 499 aa7.58□□□□□ -1.2
LIMCH1-209ENST00000509277 MPGP29372 298 aa7.58□□□□□ -1.2
LIMCH1-209ENST00000509277 SERPINF1P36955 418 aa7.58□□□□□ -1.2
LIMCH1-209ENST00000509277 CAMLGP49069 296 aa7.58□□□□□ -1.2
LIMCH1-209ENST00000509277 TSPO2Q5TGU0 170 aa7.58□□□□□ -1.2
LIMCH1-209ENST00000509277 OR2T2Q6IF00 324 aa7.58□□□□□ -1.2
LIMCH1-209ENST00000509277 CD300LDQ6UXZ3 194 aa7.58□□□□□ -1.2
LIMCH1-209ENST00000509277 ACOT7LQ6ZUV0 252 aa7.58□□□□□ -1.2
LIMCH1-209ENST00000509277 OR10AC1Q8NH08 325 aa7.58□□□□□ -1.2
LIMCH1-209ENST00000509277 CPT1CQ8TCG5 803 aa7.58□□□□□ -1.2
LIMCH1-209ENST00000509277 OIT3Q8WWZ8 545 aa7.58□□□□□ -1.2
LIMCH1-209ENST00000509277 APH1AQ96BI3 265 aa7.58□□□□□ -1.2
LIMCH1-209ENST00000509277 SLC25A44Q96H78 314 aaPredicted RBP7.58□□□□□ -1.2
LIMCH1-209ENST00000509277 CNN2Q99439 309 aaKnown RBP7.58□□□□□ -1.2
LIMCH1-209ENST00000509277 SMCO3A2RU48 225 aa7.58□□□□□ -1.2
LIMCH1-209ENST00000509277 CBY3A6NI87 242 aa7.58□□□□□ -1.2
LIMCH1-209ENST00000509277 SLC22A31A6NKX4 558 aa7.58□□□□□ -1.2
LIMCH1-209ENST00000509277 ZNF736B4DX44 427 aaPredicted RBP7.58□□□□□ -1.2
LIMCH1-209ENST00000509277 F5H5K5 113 aa7.58□□□□□ -1.2
LIMCH1-209ENST00000509277 GEMIN2O14893 280 aaKnown RBP7.58□□□□□ -1.2
LIMCH1-209ENST00000509277 CEACAM4O75871 244 aa7.58□□□□□ -1.2
LIMCH1-209ENST00000509277 PMS2P2O95744 297 aa7.58□□□□□ -1.2
LIMCH1-209ENST00000509277 OR8U9P0C7N5 309 aa7.58□□□□□ -1.2
LIMCH1-209ENST00000509277 GSK3AP49840 483 aa7.58□□□□□ -1.2
LIMCH1-209ENST00000509277 RBP2P50120 134 aa7.58□□□□□ -1.2
LIMCH1-209ENST00000509277 GLO1Q04760 184 aa7.58□□□□□ -1.2
LIMCH1-209ENST00000509277 SPOCK1Q08629 439 aa7.58□□□□□ -1.2
LIMCH1-209ENST00000509277 FOXF2Q12947 444 aa7.58□□□□□ -1.2
LIMCH1-209ENST00000509277 IGFBP7Q16270 282 aa7.58□□□□□ -1.2
LIMCH1-209ENST00000509277 RNASE10Q5GAN6 216 aaKnown RBP7.58□□□□□ -1.2
LIMCH1-209ENST00000509277 PHYHD1Q5SRE7 291 aa7.58□□□□□ -1.2
LIMCH1-209ENST00000509277 AADACL4Q5VUY2 407 aa7.58□□□□□ -1.2
LIMCH1-209ENST00000509277 VWA1Q6PCB0 445 aa7.58□□□□□ -1.2
LIMCH1-209ENST00000509277 DHRS11Q6UWP2 260 aa7.58□□□□□ -1.2
LIMCH1-209ENST00000509277 ZNF813Q6ZN06 617 aa7.58□□□□□ -1.2
LIMCH1-209ENST00000509277 GID4Q8IVV7 300 aa7.58□□□□□ -1.2
LIMCH1-209ENST00000509277 BHLHE23Q8NDY6 225 aa7.58□□□□□ -1.2
LIMCH1-209ENST00000509277 OR2AJ1Q8NGZ0 328 aa7.58□□□□□ -1.2
LIMCH1-209ENST00000509277 OR8U1Q8NH10 309 aa7.58□□□□□ -1.2
LIMCH1-209ENST00000509277 ASB10Q8WXI3 467 aa7.58□□□□□ -1.2
LIMCH1-209ENST00000509277 MCHR2Q969V1 340 aa7.58□□□□□ -1.2
LIMCH1-209ENST00000509277 KIRREL1Q96J84 757 aa7.58□□□□□ -1.2
LIMCH1-209ENST00000509277 CBLN4Q9NTU7 201 aa7.58□□□□□ -1.2
LIMCH1-209ENST00000509277 B9D1Q9UPM9 204 aa7.58□□□□□ -1.2
LIMCH1-209ENST00000509277 FLVCR1Q9Y5Y0 555 aa7.58□□□□□ -1.2
LIMCH1-209ENST00000509277 KIAA1549Q9HCM3 1950 aa7.58□□□□□ -1.2
LIMCH1-209ENST00000509277 ZNF705FA8MVS1 300 aaPredicted RBP7.58□□□□□ -1.2
LIMCH1-209ENST00000509277 IL2RAP01589 272 aa7.58□□□□□ -1.2
LIMCH1-209ENST00000509277 ZNF705DP0CH99 300 aaPredicted RBP7.58□□□□□ -1.2
LIMCH1-209ENST00000509277 ZNF705BP0CI00 300 aaPredicted RBP7.58□□□□□ -1.2
LIMCH1-209ENST00000509277 CCL2P13500 99 aa7.58□□□□□ -1.2
LIMCH1-209ENST00000509277 OMGP23515 440 aa7.58□□□□□ -1.2
LIMCH1-209ENST00000509277 SLC17A1Q14916 467 aa7.58□□□□□ -1.2
LIMCH1-209ENST00000509277 SLC22A6Q4U2R8 563 aa7.58□□□□□ -1.2
LIMCH1-209ENST00000509277 SLC25A53Q5H9E4 307 aa7.58□□□□□ -1.2
LIMCH1-209ENST00000509277 RPL7L1Q6DKI1 246 aaKnown RBP7.58□□□□□ -1.2
LIMCH1-209ENST00000509277 RTL6Q6ICC9 239 aa7.58□□□□□ -1.2
LIMCH1-209ENST00000509277 KLHL24Q6TFL4 600 aa7.58□□□□□ -1.2
LIMCH1-209ENST00000509277 SLC35F2Q8IXU6 374 aa7.58□□□□□ -1.2
LIMCH1-209ENST00000509277 GVQW1Q8N7I0 195 aa7.58□□□□□ -1.2
LIMCH1-209ENST00000509277 Q8NA96 180 aa7.58□□□□□ -1.2
LIMCH1-209ENST00000509277 C9orf106Q8NAJ2 232 aa7.58□□□□□ -1.2
LIMCH1-209ENST00000509277 OR4A4PQ8NGN8 299 aa7.58□□□□□ -1.2
LIMCH1-209ENST00000509277 RNF138Q8WVD3 245 aa7.58□□□□□ -1.2
LIMCH1-209ENST00000509277 SLC7A10Q9NS82 523 aa7.58□□□□□ -1.2
LIMCH1-209ENST00000509277 C5orf52A6NGY3 159 aa7.57□□□□□ -1.2
LIMCH1-209ENST00000509277 FIGNL2A6NMB9 653 aa7.57□□□□□ -1.2
LIMCH1-209ENST00000509277 HEXAP06865 529 aa7.57□□□□□ -1.2
LIMCH1-209ENST00000509277 NTF4P34130 210 aa7.57□□□□□ -1.2
LIMCH1-209ENST00000509277 NPY4RP50391 375 aa7.57□□□□□ -1.2
LIMCH1-209ENST00000509277 RPS4XP62701 263 aaKnown RBP7.57□□□□□ -1.2
LIMCH1-209ENST00000509277 HAGHQ16775 308 aa7.57□□□□□ -1.2
LIMCH1-209ENST00000509277 ZNF584Q8IVC4 421 aa7.57□□□□□ -1.2
LIMCH1-209ENST00000509277 OR51A4Q8NGJ6 313 aa7.57□□□□□ -1.2
LIMCH1-209ENST00000509277 OR52N5Q8NH56 324 aa7.57□□□□□ -1.2
LIMCH1-209ENST00000509277 NUDCD2Q8WVJ2 157 aa7.57□□□□□ -1.2
LIMCH1-209ENST00000509277 GTF3AQ92664 365 aaKnown RBP7.57□□□□□ -1.2
LIMCH1-209ENST00000509277 PELI1Q96FA3 418 aa7.57□□□□□ -1.2
LIMCH1-209ENST00000509277 SPACA5Q96QH8 159 aa7.57□□□□□ -1.2
LIMCH1-209ENST00000509277 OPN3Q9H1Y3 402 aaPredicted RBP7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms