RNA–Protein interactions for RNA: ENST00000507459.5

CCHCR1-222, Transcript of coiled-coil alpha-helical rod protein 1, human

TSL 5

Gene CCHCR1, Length 582 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCHCR1-222	ENST00000507459	DHDH	Q9UQ10	334 aa		11.64	□□□□□ -0.55
CCHCR1-222	ENST00000507459	CAB39	Q9Y376	341 aa	Predicted RBP	11.64	□□□□□ -0.55
CCHCR1-222	ENST00000507459		A0A1W2PRD5	423 aa		11.63	□□□□□ -0.55
CCHCR1-222	ENST00000507459		A0A1W2PRF3	423 aa		11.63	□□□□□ -0.55
CCHCR1-222	ENST00000507459		A0A1W2PRM7	423 aa		11.63	□□□□□ -0.55
CCHCR1-222	ENST00000507459		H0YAE9	185 aa		11.63	□□□□□ -0.55
CCHCR1-222	ENST00000507459	KNG1	P01042	644 aa		11.63	□□□□□ -0.55
CCHCR1-222	ENST00000507459	NPBWR2	P48146	333 aa		11.63	□□□□□ -0.55
CCHCR1-222	ENST00000507459	SOX2	P48431	317 aa		11.63	□□□□□ -0.55
CCHCR1-222	ENST00000507459	COL10A1	Q03692	680 aa		11.63	□□□□□ -0.55
CCHCR1-222	ENST00000507459	SLC34A1	Q06495	639 aa		11.63	□□□□□ -0.55
CCHCR1-222	ENST00000507459	BLMH	Q13867	455 aa		11.63	□□□□□ -0.55
CCHCR1-222	ENST00000507459	SLC9A3R2	Q15599	337 aa		11.63	□□□□□ -0.55
CCHCR1-222	ENST00000507459	C12orf54	Q6X4T0	127 aa		11.63	□□□□□ -0.55
CCHCR1-222	ENST00000507459	LHFPL2	Q6ZUX7	228 aa		11.63	□□□□□ -0.55
CCHCR1-222	ENST00000507459	RNF144B	Q7Z419	303 aa		11.63	□□□□□ -0.55
CCHCR1-222	ENST00000507459	MKX	Q8IYA7	352 aa		11.63	□□□□□ -0.55
CCHCR1-222	ENST00000507459	KIR3DL3	Q8N743	410 aa		11.63	□□□□□ -0.55
CCHCR1-222	ENST00000507459		Q8N7P7	452 aa		11.63	□□□□□ -0.55
CCHCR1-222	ENST00000507459	ASCC1	Q8N9N2	400 aa	Known RBP	11.63	□□□□□ -0.55
CCHCR1-222	ENST00000507459	OR4M1	Q8NGD0	313 aa		11.63	□□□□□ -0.55
CCHCR1-222	ENST00000507459	GGH	Q92820	318 aa		11.63	□□□□□ -0.55
CCHCR1-222	ENST00000507459	SPSB1	Q96BD6	273 aa		11.63	□□□□□ -0.55
CCHCR1-222	ENST00000507459	TMEM80	Q96HE8	168 aa		11.63	□□□□□ -0.55
CCHCR1-222	ENST00000507459	ZCCHC4	Q9H5U6	513 aa		11.63	□□□□□ -0.55
CCHCR1-222	ENST00000507459	C19orf12	Q9NSK7	152 aa		11.63	□□□□□ -0.55
CCHCR1-222	ENST00000507459	CHCHD3	Q9NX63	227 aa	Known RBP	11.63	□□□□□ -0.55
CCHCR1-222	ENST00000507459	CLEC2D	Q9UHP7	191 aa		11.63	□□□□□ -0.55
CCHCR1-222	ENST00000507459	DIMT1	Q9UNQ2	313 aa	Known RBP	11.63	□□□□□ -0.55
CCHCR1-222	ENST00000507459	EXOSC1	Q9Y3B2	195 aa	Known RBP	11.63	□□□□□ -0.55
CCHCR1-222	ENST00000507459	HSPE1-MOB4	S4R3N1	261 aa		11.63	□□□□□ -0.55
CCHCR1-222	ENST00000507459	TRBV23-1	A0A0A0MS06	115 aa		11.62	□□□□□ -0.55
CCHCR1-222	ENST00000507459	HOXA3	O43365	443 aa	Predicted RBP	11.62	□□□□□ -0.55
CCHCR1-222	ENST00000507459	ANGPTL7	O43827	346 aa		11.62	□□□□□ -0.55
CCHCR1-222	ENST00000507459	XPNPEP2	O43895	674 aa		11.62	□□□□□ -0.55
CCHCR1-222	ENST00000507459	RPSA	P08865	295 aa	Known RBP	11.62	□□□□□ -0.55
CCHCR1-222	ENST00000507459	BCL3	P20749	454 aa		11.62	□□□□□ -0.55
CCHCR1-222	ENST00000507459	SNU13	P55769	128 aa	Known RBP	11.62	□□□□□ -0.55
CCHCR1-222	ENST00000507459	RPL31	P62899	125 aa	Known RBP	11.62	□□□□□ -0.55
CCHCR1-222	ENST00000507459	ST3GAL4	Q11206	333 aa		11.62	□□□□□ -0.55
CCHCR1-222	ENST00000507459	KLRD1	Q13241	179 aa		11.62	□□□□□ -0.55
CCHCR1-222	ENST00000507459	MED21	Q13503	144 aa		11.62	□□□□□ -0.55
CCHCR1-222	ENST00000507459	RPL22L1	Q6P5R6	122 aa	Known RBP	11.62	□□□□□ -0.55
CCHCR1-222	ENST00000507459	SERPINA12	Q8IW75	414 aa		11.62	□□□□□ -0.55
CCHCR1-222	ENST00000507459	OR5D18	Q8NGL1	313 aa		11.62	□□□□□ -0.55
CCHCR1-222	ENST00000507459	OR5D14	Q8NGL3	314 aa		11.62	□□□□□ -0.55
CCHCR1-222	ENST00000507459	HAVCR2	Q8TDQ0	301 aa		11.62	□□□□□ -0.55
CCHCR1-222	ENST00000507459	SLC25A28	Q96A46	364 aa		11.62	□□□□□ -0.55
CCHCR1-222	ENST00000507459	DMRTB1	Q96MA1	342 aa		11.62	□□□□□ -0.55
CCHCR1-222	ENST00000507459	NEK6	Q9HC98	313 aa		11.62	□□□□□ -0.55
CCHCR1-222	ENST00000507459	RBFOX1	Q9NWB1	397 aa	Known RBP	11.62	□□□□□ -0.55
CCHCR1-222	ENST00000507459	IL36RN	Q9UBH0	155 aa		11.62	□□□□□ -0.55
CCHCR1-222	ENST00000507459		A0A0U1RQK1	487 aa		11.61	□□□□□ -0.55
CCHCR1-222	ENST00000507459	RNASEK-C17orf49	H0YIS7	233 aa		11.61	□□□□□ -0.55
CCHCR1-222	ENST00000507459		M0R1W7	72 aa		11.61	□□□□□ -0.55
CCHCR1-222	ENST00000507459	TK1	P04183	234 aa		11.61	□□□□□ -0.55
CCHCR1-222	ENST00000507459	CHRM2	P08172	466 aa		11.61	□□□□□ -0.55
CCHCR1-222	ENST00000507459	HCK	P08631	526 aa		11.61	□□□□□ -0.55
CCHCR1-222	ENST00000507459	PIP	P12273	146 aa	Predicted RBP	11.61	□□□□□ -0.55
CCHCR1-222	ENST00000507459	PRKACA	P17612	351 aa		11.61	□□□□□ -0.55
CCHCR1-222	ENST00000507459	DUSP1	P28562	367 aa		11.61	□□□□□ -0.55
CCHCR1-222	ENST00000507459	PDZK1IP1	Q13113	114 aa		11.61	□□□□□ -0.55
CCHCR1-222	ENST00000507459	CDK5R1	Q15078	307 aa		11.61	□□□□□ -0.55
CCHCR1-222	ENST00000507459	FIP1L1	Q6UN15	594 aa	Known RBP	11.61	□□□□□ -0.55
CCHCR1-222	ENST00000507459	FAM58A	Q8N1B3	248 aa		11.61	□□□□□ -0.55
CCHCR1-222	ENST00000507459	BPIFB6	Q8NFQ5	453 aa		11.61	□□□□□ -0.55
CCHCR1-222	ENST00000507459	BABAM2	Q9NXR7	383 aa		11.61	□□□□□ -0.55
CCHCR1-222	ENST00000507459	SIRT4	Q9Y6E7	314 aa	Predicted RBP	11.61	□□□□□ -0.55
CCHCR1-222	ENST00000507459	MEX3A	A1L020	520 aa	Known RBP	11.6	□□□□□ -0.55
CCHCR1-222	ENST00000507459	TMEM89	A2RUT3	159 aa		11.6	□□□□□ -0.55
CCHCR1-222	ENST00000507459		K7N7A8	449 aa		11.6	□□□□□ -0.55
CCHCR1-222	ENST00000507459	HAX1	O00165	279 aa		11.6	□□□□□ -0.55
CCHCR1-222	ENST00000507459	SULT1B1	O43704	296 aa		11.6	□□□□□ -0.55
CCHCR1-222	ENST00000507459	LALBA	P00709	142 aa		11.6	□□□□□ -0.55
CCHCR1-222	ENST00000507459	MT-ND2	P03891	347 aa		11.6	□□□□□ -0.55
CCHCR1-222	ENST00000507459	RNASE1	P07998	156 aa	Known RBP	11.6	□□□□□ -0.55
CCHCR1-222	ENST00000507459	EEF1B2	P24534	225 aa	Known RBP	11.6	□□□□□ -0.55
CCHCR1-222	ENST00000507459	GUCA2A	Q02747	115 aa		11.6	□□□□□ -0.55
CCHCR1-222	ENST00000507459	CCDC58	Q4VC31	144 aa		11.6	□□□□□ -0.55
CCHCR1-222	ENST00000507459	TMEM200B	Q69YZ2	307 aa		11.6	□□□□□ -0.55
CCHCR1-222	ENST00000507459	LAIR2	Q6ISS4	152 aa		11.6	□□□□□ -0.55
CCHCR1-222	ENST00000507459	C1orf122	Q6ZSJ8	110 aa		11.6	□□□□□ -0.55
CCHCR1-222	ENST00000507459	AHSA2	Q719I0	299 aa		11.6	□□□□□ -0.55
CCHCR1-222	ENST00000507459		Q8IYB0	196 aa		11.6	□□□□□ -0.55
CCHCR1-222	ENST00000507459	PNKD	Q8N490	385 aa		11.6	□□□□□ -0.55
CCHCR1-222	ENST00000507459	STX19	Q8N4C7	294 aa		11.6	□□□□□ -0.55
CCHCR1-222	ENST00000507459	PIP4P2	Q8N4L2	257 aa		11.6	□□□□□ -0.55
CCHCR1-222	ENST00000507459	PARP16	Q8N5Y8	322 aa		11.6	□□□□□ -0.55
CCHCR1-222	ENST00000507459	ZFP41	Q8N8Y5	198 aa		11.6	□□□□□ -0.55
CCHCR1-222	ENST00000507459	GPR148	Q8TDV2	347 aa		11.6	□□□□□ -0.55
CCHCR1-222	ENST00000507459	NRG4	Q8WWG1	115 aa		11.6	□□□□□ -0.55
CCHCR1-222	ENST00000507459	RGP1	Q92546	391 aa	Predicted RBP	11.6	□□□□□ -0.55
CCHCR1-222	ENST00000507459	TFAP2C	Q92754	450 aa		11.6	□□□□□ -0.55
CCHCR1-222	ENST00000507459	TAF15	Q92804	592 aa	Known RBP eCLIP	11.6	□□□□□ -0.55
CCHCR1-222	ENST00000507459	FAM234A	Q9H0X4	552 aa		11.6	□□□□□ -0.55
CCHCR1-222	ENST00000507459	METTL8	Q9H825	291 aa	Known RBP	11.6	□□□□□ -0.55
CCHCR1-222	ENST00000507459	ZMAT3	Q9HA38	289 aa	Known RBP	11.6	□□□□□ -0.55
CCHCR1-222	ENST00000507459	NOX4	Q9NPH5	578 aa		11.6	□□□□□ -0.55
CCHCR1-222	ENST00000507459	FAM96B	Q9Y3D0	163 aa		11.6	□□□□□ -0.55
CCHCR1-222	ENST00000507459	IGKV1-12	A0A0C4DH73	117 aa		11.59	□□□□□ -0.55

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