RNA–Protein interactions for RNA: ENST00000497179.1

USP11-212, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 5

Gene USP11, Length 900 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-212ENST00000497179 TIMM50Q3ZCQ8 353 aa12.05□□□□□ -0.48
USP11-212ENST00000497179 C1orf100Q5SVJ3 147 aa12.05□□□□□ -0.48
USP11-212ENST00000497179 GLT8D1Q68CQ7 371 aa12.05□□□□□ -0.48
USP11-212ENST00000497179 ZNF788Q6ZQV5 615 aa12.05□□□□□ -0.48
USP11-212ENST00000497179 NLRC3Q7RTR2 1065 aa12.05□□□□□ -0.48
USP11-212ENST00000497179 FAM58AQ8N1B3 248 aa12.05□□□□□ -0.48
USP11-212ENST00000497179 OR8B3Q8NGG8 313 aa12.05□□□□□ -0.48
USP11-212ENST00000497179 FOXRED1Q96CU9 486 aaPredicted RBP12.05□□□□□ -0.48
USP11-212ENST00000497179 OR8B2Q96RD0 313 aa12.05□□□□□ -0.48
USP11-212ENST00000497179 CCL13Q99616 98 aa12.05□□□□□ -0.48
USP11-212ENST00000497179 GFI1Q99684 422 aa12.05□□□□□ -0.48
USP11-212ENST00000497179 CHCHD6Q9BRQ6 235 aa12.05□□□□□ -0.48
USP11-212ENST00000497179 CNTD2Q9H8S5 307 aa12.05□□□□□ -0.48
USP11-212ENST00000497179 HMG20AQ9NP66 347 aa12.05□□□□□ -0.48
USP11-212ENST00000497179 IL36GQ9NZH8 169 aa12.05□□□□□ -0.48
USP11-212ENST00000497179 CTSZQ9UBR2 303 aa12.05□□□□□ -0.48
USP11-212ENST00000497179 SHISA3A0PJX4 238 aa12.04□□□□□ -0.48
USP11-212ENST00000497179 A8MXK9 166 aa12.04□□□□□ -0.48
USP11-212ENST00000497179 TFAP2AP05549 437 aa12.04□□□□□ -0.48
USP11-212ENST00000497179 PITPNBP48739 271 aa12.04□□□□□ -0.48
USP11-212ENST00000497179 MTNR1BP49286 362 aa12.04□□□□□ -0.48
USP11-212ENST00000497179 BMXP51813 675 aa12.04□□□□□ -0.48
USP11-212ENST00000497179 SEC61A1P61619 476 aaKnown RBP12.04□□□□□ -0.48
USP11-212ENST00000497179 ELP2Q6IA86 826 aa12.04□□□□□ -0.48
USP11-212ENST00000497179 FIP1L1Q6UN15 594 aaKnown RBP12.04□□□□□ -0.48
USP11-212ENST00000497179 ZNF841Q6ZN19 808 aa12.04□□□□□ -0.48
USP11-212ENST00000497179 GDPGP1Q6ZNW5 385 aa12.04□□□□□ -0.48
USP11-212ENST00000497179 SLC36A1Q7Z2H8 476 aa12.04□□□□□ -0.48
USP11-212ENST00000497179 Q8NFD4 153 aa12.04□□□□□ -0.48
USP11-212ENST00000497179 OR5T2Q8NGG2 359 aa12.04□□□□□ -0.48
USP11-212ENST00000497179 OR4D6Q8NGJ1 314 aa12.04□□□□□ -0.48
USP11-212ENST00000497179 TBC1D15Q8TC07 691 aa12.04□□□□□ -0.48
USP11-212ENST00000497179 SDSLQ96GA7 329 aa12.04□□□□□ -0.48
USP11-212ENST00000497179 C1orf147Q96MC9 270 aaPredicted RBP12.04□□□□□ -0.48
USP11-212ENST00000497179 GAFA1Q96PS6 74 aa12.04□□□□□ -0.48
USP11-212ENST00000497179 SEBOXQ9HB31 216 aaPredicted RBP12.04□□□□□ -0.48
USP11-212ENST00000497179 IL36RNQ9UBH0 155 aa12.04□□□□□ -0.48
USP11-212ENST00000497179 GSTK1Q9Y2Q3 226 aa12.04□□□□□ -0.48
USP11-212ENST00000497179 MRPS28Q9Y2Q9 187 aaKnown RBP12.04□□□□□ -0.48
USP11-212ENST00000497179 AK6Q9Y3D8 172 aaKnown RBP12.04□□□□□ -0.48
USP11-212ENST00000497179 F8P00451 2351 aa12.03□□□□□ -0.48
USP11-212ENST00000497179 A0A1B0GW55 424 aa12.03□□□□□ -0.48
USP11-212ENST00000497179 RFPL4AA6NLU0 287 aa12.03□□□□□ -0.48
USP11-212ENST00000497179 KIAA1324LA8MWY0 1029 aaPredicted RBP12.03□□□□□ -0.48
USP11-212ENST00000497179 B4DSR2 109 aa12.03□□□□□ -0.48
USP11-212ENST00000497179 RFPL4AL1F8VTS6 287 aa12.03□□□□□ -0.48
USP11-212ENST00000497179 SIGLEC5O15389 551 aa12.03□□□□□ -0.48
USP11-212ENST00000497179 TMPRSS2O15393 492 aa12.03□□□□□ -0.48
USP11-212ENST00000497179 CDRT1O95170 752 aa12.03□□□□□ -0.48
USP11-212ENST00000497179 TFF1P04155 84 aa12.03□□□□□ -0.48
USP11-212ENST00000497179 DUX4L2P0CJ85 424 aa12.03□□□□□ -0.48
USP11-212ENST00000497179 DUX4L3P0CJ86 424 aa12.03□□□□□ -0.48
USP11-212ENST00000497179 DUX4L4P0CJ87 422 aa12.03□□□□□ -0.48
USP11-212ENST00000497179 DUX4L5P0CJ88 424 aa12.03□□□□□ -0.48
USP11-212ENST00000497179 DUX4L6P0CJ89 424 aa12.03□□□□□ -0.48
USP11-212ENST00000497179 DUX4L7P0CJ90 424 aa12.03□□□□□ -0.48
USP11-212ENST00000497179 ZNF16P17020 682 aaPredicted RBP12.03□□□□□ -0.48
USP11-212ENST00000497179 PRKACAP17612 351 aa12.03□□□□□ -0.48
USP11-212ENST00000497179 PRDX2P32119 198 aa12.03□□□□□ -0.48
USP11-212ENST00000497179 NPY4RP50391 375 aa12.03□□□□□ -0.48
USP11-212ENST00000497179 FGF12P61328 243 aa12.03□□□□□ -0.48
USP11-212ENST00000497179 IL13RA1P78552 427 aa12.03□□□□□ -0.48
USP11-212ENST00000497179 ZNF146Q15072 292 aa12.03□□□□□ -0.48
USP11-212ENST00000497179 RSU1Q15404 277 aa12.03□□□□□ -0.48
USP11-212ENST00000497179 ESCO2Q56NI9 601 aa12.03□□□□□ -0.48
USP11-212ENST00000497179 SPIN3Q5JUX0 258 aa12.03□□□□□ -0.48
USP11-212ENST00000497179 AWAT2Q6E213 333 aa12.03□□□□□ -0.48
USP11-212ENST00000497179 DUX4L9Q6RFH8 374 aaPredicted RBP12.03□□□□□ -0.48
USP11-212ENST00000497179 BIVMQ86UB2 503 aa12.03□□□□□ -0.48
USP11-212ENST00000497179 CD177Q8N6Q3 437 aa12.03□□□□□ -0.48
USP11-212ENST00000497179 FAM216BQ8N7L0 139 aa12.03□□□□□ -0.48
USP11-212ENST00000497179 LINC01356Q8N9X3 169 aa12.03□□□□□ -0.48
USP11-212ENST00000497179 OR6M1Q8NGM8 313 aa12.03□□□□□ -0.48
USP11-212ENST00000497179 MSI2Q96DH6 328 aaKnown RBP12.03□□□□□ -0.48
USP11-212ENST00000497179 KCTD7Q96MP8 289 aa12.03□□□□□ -0.48
USP11-212ENST00000497179 SSBP3Q9BWW4 388 aaPredicted RBP12.03□□□□□ -0.48
USP11-212ENST00000497179 METTL9Q9H1A3 318 aa12.03□□□□□ -0.48
USP11-212ENST00000497179 ELL3Q9HB65 397 aaPredicted RBP12.03□□□□□ -0.48
USP11-212ENST00000497179 DUX4Q9UBX2 424 aa12.03□□□□□ -0.48
USP11-212ENST00000497179 CLN8Q9UBY8 286 aa12.03□□□□□ -0.48
USP11-212ENST00000497179 ING4Q9UNL4 249 aa12.03□□□□□ -0.48
USP11-212ENST00000497179 LOC100506127A0A0U1RQW1 187 aa12.02□□□□□ -0.49
USP11-212ENST00000497179 SLC17A2O00624 439 aa12.02□□□□□ -0.49
USP11-212ENST00000497179 PDCD5O14737 125 aa12.02□□□□□ -0.49
USP11-212ENST00000497179 SLC22A1O15245 554 aa12.02□□□□□ -0.49
USP11-212ENST00000497179 CD5LO43866 347 aa12.02□□□□□ -0.49
USP11-212ENST00000497179 AIREO43918 545 aa12.02□□□□□ -0.49
USP11-212ENST00000497179 ZNF780AO75290 641 aaPredicted RBP12.02□□□□□ -0.49
USP11-212ENST00000497179 FOXH1O75593 365 aa12.02□□□□□ -0.49
USP11-212ENST00000497179 FCN3O75636 299 aa12.02□□□□□ -0.49
USP11-212ENST00000497179 MSMBP08118 114 aa12.02□□□□□ -0.49
USP11-212ENST00000497179 UBBP0CG47 229 aa12.02□□□□□ -0.49
USP11-212ENST00000497179 CALCBP10092 127 aa12.02□□□□□ -0.49
USP11-212ENST00000497179 GABRA2P47869 451 aa12.02□□□□□ -0.49
USP11-212ENST00000497179 PSMD7P51665 324 aa12.02□□□□□ -0.49
USP11-212ENST00000497179 DGUOKQ16854 277 aa12.02□□□□□ -0.49
USP11-212ENST00000497179 NHLRC3Q5JS37 347 aa12.02□□□□□ -0.49
USP11-212ENST00000497179 WDR25Q64LD2 544 aaPredicted RBP12.02□□□□□ -0.49
USP11-212ENST00000497179 CYB5R2Q6BCY4 276 aa12.02□□□□□ -0.49
USP11-212ENST00000497179 FAM166AQ6J272 317 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 128.5 ms