RNA–Protein interactions for RNA: ENST00000490476.1

SSX2IP-208, Transcript of SSX family member 2 interacting protein, humanhuman

TSL 3

Gene SSX2IP, Length 716 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-208ENST00000490476 TRAF3IP2O43734 574 aaPredicted RBP3.31□□□□□ -1.88
SSX2IP-208ENST00000490476 DEXIO95424 95 aa3.31□□□□□ -1.88
SSX2IP-208ENST00000490476 IGLV1-47P01700 117 aa3.31□□□□□ -1.88
SSX2IP-208ENST00000490476 IGLV3-25P01717 112 aa3.31□□□□□ -1.88
SSX2IP-208ENST00000490476 ERCC1P07992 297 aaPredicted RBP3.31□□□□□ -1.88
SSX2IP-208ENST00000490476 ZNF7P17097 686 aaPredicted RBP3.31□□□□□ -1.88
SSX2IP-208ENST00000490476 DCKP27707 260 aa3.31□□□□□ -1.88
SSX2IP-208ENST00000490476 CTRLP40313 264 aa3.31□□□□□ -1.88
SSX2IP-208ENST00000490476 SLC26A3P40879 764 aa3.31□□□□□ -1.88
SSX2IP-208ENST00000490476 RAB10P61026 200 aa3.31□□□□□ -1.88
SSX2IP-208ENST00000490476 ZNF92Q03936 586 aa3.31□□□□□ -1.88
SSX2IP-208ENST00000490476 LIPEQ05469 1076 aa3.31□□□□□ -1.88
SSX2IP-208ENST00000490476 PSG7Q13046 419 aa3.31□□□□□ -1.88
SSX2IP-208ENST00000490476 RFX4Q33E94 735 aa3.31□□□□□ -1.88
SSX2IP-208ENST00000490476 SYPL2Q5VXT5 272 aa3.31□□□□□ -1.88
SSX2IP-208ENST00000490476 C22orf42Q6IC83 251 aa3.31□□□□□ -1.88
SSX2IP-208ENST00000490476 TMEM53Q6P2H8 277 aa3.31□□□□□ -1.88
SSX2IP-208ENST00000490476 CMTM1Q8IZ96 169 aa3.31□□□□□ -1.88
SSX2IP-208ENST00000490476 FBXL13Q8NEE6 735 aa3.31□□□□□ -1.88
SSX2IP-208ENST00000490476 OR2G3Q8NGZ4 309 aa3.31□□□□□ -1.88
SSX2IP-208ENST00000490476 MCOLN3Q8TDD5 553 aa3.31□□□□□ -1.88
SSX2IP-208ENST00000490476 IL22RA2Q969J5 263 aa3.31□□□□□ -1.88
SSX2IP-208ENST00000490476 ECHDC3Q96DC8 303 aa3.31□□□□□ -1.88
SSX2IP-208ENST00000490476 TIMM29Q9BSF4 260 aa3.31□□□□□ -1.88
SSX2IP-208ENST00000490476 NCOR1P1Q9H4R4 102 aa3.31□□□□□ -1.88
SSX2IP-208ENST00000490476 UGT1A7Q9HAW7 530 aa3.31□□□□□ -1.88
SSX2IP-208ENST00000490476 UGT1A10Q9HAW8 530 aa3.31□□□□□ -1.88
SSX2IP-208ENST00000490476 UGT1A8Q9HAW9 530 aa3.31□□□□□ -1.88
SSX2IP-208ENST00000490476 MYOZ1Q9NP98 299 aaPredicted RBP3.31□□□□□ -1.88
SSX2IP-208ENST00000490476 CCNB1IP1Q9NPC3 277 aa3.31□□□□□ -1.88
SSX2IP-208ENST00000490476 EURLQ9NYK6 297 aa3.31□□□□□ -1.88
SSX2IP-208ENST00000490476 TRAPPC4Q9Y296 219 aa3.31□□□□□ -1.88
SSX2IP-208ENST00000490476 AGRNO00468 2067 aa3.31□□□□□ -1.88
SSX2IP-208ENST00000490476 ZNF816-ZNF321PA0A0X1KG74 233 aa3.3□□□□□ -1.88
SSX2IP-208ENST00000490476 A0A1B0GVI7 797 aa3.3□□□□□ -1.88
SSX2IP-208ENST00000490476 ZNF726A6NNF4 738 aa3.3□□□□□ -1.88
SSX2IP-208ENST00000490476 SUPT3HB4E1H0 165 aa3.3□□□□□ -1.88
SSX2IP-208ENST00000490476 GOLGA8MH3BSY2 632 aa3.3□□□□□ -1.88
SSX2IP-208ENST00000490476 OR2F2O95006 317 aa3.3□□□□□ -1.88
SSX2IP-208ENST00000490476 RCBTB2O95199 551 aa3.3□□□□□ -1.88
SSX2IP-208ENST00000490476 SERPINA5P05154 406 aa3.3□□□□□ -1.88
SSX2IP-208ENST00000490476 ZNF250P15622 560 aa3.3□□□□□ -1.88
SSX2IP-208ENST00000490476 OTX1P32242 354 aaPredicted RBP3.3□□□□□ -1.88
SSX2IP-208ENST00000490476 SLC1A1P43005 524 aa3.3□□□□□ -1.88
SSX2IP-208ENST00000490476 FGF8P55075 233 aaPredicted RBP3.3□□□□□ -1.88
SSX2IP-208ENST00000490476 NUTF2P61970 127 aaKnown RBP3.3□□□□□ -1.88
SSX2IP-208ENST00000490476 DAZ2Q13117 558 aaKnown RBP3.3□□□□□ -1.88
SSX2IP-208ENST00000490476 RCAN2Q14206 197 aa3.3□□□□□ -1.88
SSX2IP-208ENST00000490476 NCMAPQ5T1S8 102 aa3.3□□□□□ -1.88
SSX2IP-208ENST00000490476 FRMPD2BQ6IN97 320 aa3.3□□□□□ -1.88
SSX2IP-208ENST00000490476 TMEM220Q6QAJ8 160 aa3.3□□□□□ -1.88
SSX2IP-208ENST00000490476 GABRG1Q8N1C3 465 aa3.3□□□□□ -1.88
SSX2IP-208ENST00000490476 OR4E2Q8NGC2 313 aa3.3□□□□□ -1.88
SSX2IP-208ENST00000490476 OR51F2Q8NH61 342 aa3.3□□□□□ -1.88
SSX2IP-208ENST00000490476 DTX3LQ8TDB6 740 aa3.3□□□□□ -1.88
SSX2IP-208ENST00000490476 MYDGFQ969H8 173 aa3.3□□□□□ -1.88
SSX2IP-208ENST00000490476 DNAJC19Q96DA6 116 aa3.3□□□□□ -1.88
SSX2IP-208ENST00000490476 GABARAPL3Q9BY60 117 aa3.3□□□□□ -1.88
SSX2IP-208ENST00000490476 CHRNA10Q9GZZ6 450 aa3.3□□□□□ -1.88
SSX2IP-208ENST00000490476 RACGAP1Q9H0H5 632 aa3.3□□□□□ -1.88
SSX2IP-208ENST00000490476 RPF2Q9H7B2 306 aaKnown RBP3.3□□□□□ -1.88
SSX2IP-208ENST00000490476 EDA2RQ9HAV5 297 aa3.3□□□□□ -1.88
SSX2IP-208ENST00000490476 DAZ3Q9NR90 486 aaKnown RBP3.3□□□□□ -1.88
SSX2IP-208ENST00000490476 MMP26Q9NRE1 261 aa3.3□□□□□ -1.88
SSX2IP-208ENST00000490476 ZNHIT6Q9NWK9 470 aaKnown RBP3.3□□□□□ -1.88
SSX2IP-208ENST00000490476 SLC25A37Q9NYZ2 338 aa3.3□□□□□ -1.88
SSX2IP-208ENST00000490476 ZNF225Q9UK10 706 aa3.3□□□□□ -1.88
SSX2IP-208ENST00000490476 GOLT1BQ9Y3E0 138 aa3.3□□□□□ -1.88
SSX2IP-208ENST00000490476 A0A1B0GW55 424 aa3.29□□□□□ -1.88
SSX2IP-208ENST00000490476 KRTAP4-16G5E9R7 235 aaPredicted RBP3.29□□□□□ -1.88
SSX2IP-208ENST00000490476 SIRPB1O00241 398 aa3.29□□□□□ -1.88
SSX2IP-208ENST00000490476 KMOO15229 486 aa3.29□□□□□ -1.88
SSX2IP-208ENST00000490476 DEDDO75618 318 aa3.29□□□□□ -1.88
SSX2IP-208ENST00000490476 ACSM4P0C7M7 580 aa3.29□□□□□ -1.88
SSX2IP-208ENST00000490476 DUX4L2P0CJ85 424 aa3.29□□□□□ -1.88
SSX2IP-208ENST00000490476 DUX4L3P0CJ86 424 aa3.29□□□□□ -1.88
SSX2IP-208ENST00000490476 DUX4L5P0CJ88 424 aa3.29□□□□□ -1.88
SSX2IP-208ENST00000490476 DUX4L6P0CJ89 424 aa3.29□□□□□ -1.88
SSX2IP-208ENST00000490476 DUX4L7P0CJ90 424 aa3.29□□□□□ -1.88
SSX2IP-208ENST00000490476 MYL2P10916 166 aa3.29□□□□□ -1.88
SSX2IP-208ENST00000490476 HMOX2P30519 316 aa3.29□□□□□ -1.88
SSX2IP-208ENST00000490476 SERPINB5P36952 375 aa3.29□□□□□ -1.88
SSX2IP-208ENST00000490476 SSR4P51571 173 aa3.29□□□□□ -1.88
SSX2IP-208ENST00000490476 EIF3EP60228 445 aaKnown RBP3.29□□□□□ -1.88
SSX2IP-208ENST00000490476 XRCC4Q13426 336 aa3.29□□□□□ -1.88
SSX2IP-208ENST00000490476 ZSCAN26Q16670 478 aa3.29□□□□□ -1.88
SSX2IP-208ENST00000490476 KCTD19Q17RG1 926 aaPredicted RBP3.29□□□□□ -1.88
SSX2IP-208ENST00000490476 SPOPLQ6IQ16 392 aa3.29□□□□□ -1.88
SSX2IP-208ENST00000490476 DUX4L9Q6RFH8 374 aaPredicted RBP3.29□□□□□ -1.88
SSX2IP-208ENST00000490476 ZNF621Q6ZSS3 439 aa3.29□□□□□ -1.88
SSX2IP-208ENST00000490476 LINC00173Q6ZV60 143 aa3.29□□□□□ -1.88
SSX2IP-208ENST00000490476 KATNAL2Q8IYT4 538 aa3.29□□□□□ -1.88
SSX2IP-208ENST00000490476 FAM71E2Q8N5Q1 922 aa3.29□□□□□ -1.88
SSX2IP-208ENST00000490476 TMEM156Q8N614 296 aa3.29□□□□□ -1.88
SSX2IP-208ENST00000490476 TTC29Q8NA56 475 aaPredicted RBP3.29□□□□□ -1.88
SSX2IP-208ENST00000490476 TSEN15Q8WW01 171 aaKnown RBP3.29□□□□□ -1.88
SSX2IP-208ENST00000490476 CAPSLQ8WWF8 208 aa3.29□□□□□ -1.88
SSX2IP-208ENST00000490476 OSBPL10Q9BXB5 764 aa3.29□□□□□ -1.88
SSX2IP-208ENST00000490476 IQCGQ9H095 443 aaKnown RBP3.29□□□□□ -1.88
SSX2IP-208ENST00000490476 OR2AG1Q9H205 316 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 154.9 ms