RNA–Protein interactions for RNA: ENST00000489053.1

HDAC6-232, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-232ENST00000489053 EDDM3AQ14507 147 aa7.51□□□□□ -1.21
HDAC6-232ENST00000489053 UBE2V2Q15819 145 aa7.51□□□□□ -1.21
HDAC6-232ENST00000489053 LRRC36Q1X8D7 754 aa7.51□□□□□ -1.21
HDAC6-232ENST00000489053 TTC23Q5W5X9 447 aa7.51□□□□□ -1.21
HDAC6-232ENST00000489053 DHRS7BQ6IAN0 325 aaPredicted RBP7.51□□□□□ -1.21
HDAC6-232ENST00000489053 Q6YL49 198 aa7.51□□□□□ -1.21
HDAC6-232ENST00000489053 C1orf122Q6ZSJ8 110 aa7.51□□□□□ -1.21
HDAC6-232ENST00000489053 TRAPPC6BQ86SZ2 158 aa7.51□□□□□ -1.21
HDAC6-232ENST00000489053 SYS1Q8N2H4 156 aa7.51□□□□□ -1.21
HDAC6-232ENST00000489053 DNAAF1Q8NEP3 725 aa7.51□□□□□ -1.21
HDAC6-232ENST00000489053 OR5D14Q8NGL3 314 aa7.51□□□□□ -1.21
HDAC6-232ENST00000489053 OR13C9Q8NGT0 318 aa7.51□□□□□ -1.21
HDAC6-232ENST00000489053 OR5AK2Q8NH90 309 aa7.51□□□□□ -1.21
HDAC6-232ENST00000489053 RHOXF1Q8NHV9 184 aa7.51□□□□□ -1.21
HDAC6-232ENST00000489053 C8orf46Q8TAG6 207 aa7.51□□□□□ -1.21
HDAC6-232ENST00000489053 GPER1Q99527 375 aa7.51□□□□□ -1.21
HDAC6-232ENST00000489053 UNKLQ9H9P5 680 aaKnown RBP7.51□□□□□ -1.21
HDAC6-232ENST00000489053 FAM118AQ9NWS6 357 aa7.51□□□□□ -1.21
HDAC6-232ENST00000489053 AASSQ9UDR5 926 aa7.51□□□□□ -1.21
HDAC6-232ENST00000489053 EXOGQ9Y2C4 368 aaKnown RBP7.51□□□□□ -1.21
HDAC6-232ENST00000489053 MAB21L2Q9Y586 359 aa7.51□□□□□ -1.21
HDAC6-232ENST00000489053 MGAM2Q2M2H8 2515 aa7.5□□□□□ -1.21
HDAC6-232ENST00000489053 TRBV2A0A0J9YWF9 115 aa7.5□□□□□ -1.21
HDAC6-232ENST00000489053 FUOMA2VDF0 154 aa7.5□□□□□ -1.21
HDAC6-232ENST00000489053 POM121CA8CG34 1229 aa7.5□□□□□ -1.21
HDAC6-232ENST00000489053 HAND1O96004 215 aa7.5□□□□□ -1.21
HDAC6-232ENST00000489053 IGHV4-59P01825 116 aa7.5□□□□□ -1.21
HDAC6-232ENST00000489053 TK1P04183 234 aa7.5□□□□□ -1.21
HDAC6-232ENST00000489053 ISG15P05161 165 aa7.5□□□□□ -1.21
HDAC6-232ENST00000489053 PRKACAP17612 351 aa7.5□□□□□ -1.21
HDAC6-232ENST00000489053 ATF1P18846 271 aa7.5□□□□□ -1.21
HDAC6-232ENST00000489053 OMGP23515 440 aa7.5□□□□□ -1.21
HDAC6-232ENST00000489053 COX7A1P24310 79 aa7.5□□□□□ -1.21
HDAC6-232ENST00000489053 PEX2P28328 305 aa7.5□□□□□ -1.21
HDAC6-232ENST00000489053 UBE2E1P51965 193 aa7.5□□□□□ -1.21
HDAC6-232ENST00000489053 ERVFRD-1P60508 538 aa7.5□□□□□ -1.21
HDAC6-232ENST00000489053 COL10A1Q03692 680 aa7.5□□□□□ -1.21
HDAC6-232ENST00000489053 PRB3Q04118 309 aaPredicted RBP7.5□□□□□ -1.21
HDAC6-232ENST00000489053 ACSM1Q08AH1 577 aa7.5□□□□□ -1.21
HDAC6-232ENST00000489053 KLRD1Q13241 179 aa7.5□□□□□ -1.21
HDAC6-232ENST00000489053 RCN1Q15293 331 aa7.5□□□□□ -1.21
HDAC6-232ENST00000489053 METAP1DQ6UB28 335 aaPredicted RBP7.5□□□□□ -1.21
HDAC6-232ENST00000489053 UTS2BQ765I0 119 aa7.5□□□□□ -1.21
HDAC6-232ENST00000489053 CALHM1Q8IU99 346 aa7.5□□□□□ -1.21
HDAC6-232ENST00000489053 FAM58AQ8N1B3 248 aa7.5□□□□□ -1.21
HDAC6-232ENST00000489053 CD177Q8N6Q3 437 aa7.5□□□□□ -1.21
HDAC6-232ENST00000489053 OR4M1Q8NGD0 313 aa7.5□□□□□ -1.21
HDAC6-232ENST00000489053 OR13D1Q8NGV5 346 aa7.5□□□□□ -1.21
HDAC6-232ENST00000489053 OR5R1Q8NH85 324 aa7.5□□□□□ -1.21
HDAC6-232ENST00000489053 DYRK2Q92630 601 aa7.5□□□□□ -1.21
HDAC6-232ENST00000489053 OPALINQ96PE5 141 aa7.5□□□□□ -1.21
HDAC6-232ENST00000489053 SLC29A1Q99808 456 aa7.5□□□□□ -1.21
HDAC6-232ENST00000489053 CHIAQ9BZP6 476 aa7.5□□□□□ -1.21
HDAC6-232ENST00000489053 EXOSC4Q9NPD3 245 aaKnown RBP7.5□□□□□ -1.21
HDAC6-232ENST00000489053 C19orf12Q9NSK7 152 aa7.5□□□□□ -1.21
HDAC6-232ENST00000489053 FRRS1LQ9P0K9 344 aa7.5□□□□□ -1.21
HDAC6-232ENST00000489053 ZNF222Q9UK12 451 aa7.5□□□□□ -1.21
HDAC6-232ENST00000489053 hADV38S2A0JD32 116 aa7.49□□□□□ -1.21
HDAC6-232ENST00000489053 RNASEK-C17orf49H0YIS7 233 aa7.49□□□□□ -1.21
HDAC6-232ENST00000489053 H3BUI4 141 aa7.49□□□□□ -1.21
HDAC6-232ENST00000489053 SH2D1BO14796 132 aa7.49□□□□□ -1.21
HDAC6-232ENST00000489053 SPRY1O43609 319 aaPredicted RBP7.49□□□□□ -1.21
HDAC6-232ENST00000489053 TMEM225BP0DP42 221 aa7.49□□□□□ -1.21
HDAC6-232ENST00000489053 AMY2BP19961 511 aa7.49□□□□□ -1.21
HDAC6-232ENST00000489053 DCKP27707 260 aa7.49□□□□□ -1.21
HDAC6-232ENST00000489053 SAA4P35542 130 aa7.49□□□□□ -1.21
HDAC6-232ENST00000489053 NANOS3P60323 173 aaKnown RBP7.49□□□□□ -1.21
HDAC6-232ENST00000489053 RPL15P61313 204 aaKnown RBP7.49□□□□□ -1.21
HDAC6-232ENST00000489053 ISL1P61371 349 aa7.49□□□□□ -1.21
HDAC6-232ENST00000489053 PPP3R1P63098 170 aa7.49□□□□□ -1.21
HDAC6-232ENST00000489053 SCN1BQ07699 218 aa7.49□□□□□ -1.21
HDAC6-232ENST00000489053 DYNC1I2Q13409 638 aaKnown RBP7.49□□□□□ -1.21
HDAC6-232ENST00000489053 GRK1Q15835 563 aa7.49□□□□□ -1.21
HDAC6-232ENST00000489053 MIDNQ504T8 468 aa7.49□□□□□ -1.21
HDAC6-232ENST00000489053 SPIN3Q5JUX0 258 aa7.49□□□□□ -1.21
HDAC6-232ENST00000489053 LPCAT4Q643R3 524 aa7.49□□□□□ -1.21
HDAC6-232ENST00000489053 FDX2Q6P4F2 183 aa7.49□□□□□ -1.21
HDAC6-232ENST00000489053 SATL1Q86VE3 508 aa7.49□□□□□ -1.21
HDAC6-232ENST00000489053 SERPINA12Q8IW75 414 aa7.49□□□□□ -1.21
HDAC6-232ENST00000489053 DHRSXQ8N5I4 330 aa7.49□□□□□ -1.21
HDAC6-232ENST00000489053 PACRGLQ8N7B6 248 aa7.49□□□□□ -1.21
HDAC6-232ENST00000489053 OR52I1Q8NGK6 324 aa7.49□□□□□ -1.21
HDAC6-232ENST00000489053 RFT1Q96AA3 541 aa7.49□□□□□ -1.21
HDAC6-232ENST00000489053 ADAT3Q96EY9 351 aaPredicted RBP7.49□□□□□ -1.21
HDAC6-232ENST00000489053 PELI1Q96FA3 418 aa7.49□□□□□ -1.21
HDAC6-232ENST00000489053 C1orf147Q96MC9 270 aaPredicted RBP7.49□□□□□ -1.21
HDAC6-232ENST00000489053 S100A13Q99584 98 aa7.49□□□□□ -1.21
HDAC6-232ENST00000489053 ZNF747Q9BV97 191 aa7.49□□□□□ -1.21
HDAC6-232ENST00000489053 FAM192AQ9GZU8 254 aa7.49□□□□□ -1.21
HDAC6-232ENST00000489053 ZCCHC4Q9H5U6 513 aa7.49□□□□□ -1.21
HDAC6-232ENST00000489053 RAB18Q9NP72 206 aa7.49□□□□□ -1.21
HDAC6-232ENST00000489053 ABCB10Q9NRK6 738 aa7.49□□□□□ -1.21
HDAC6-232ENST00000489053 ERVK13-1Q9NX77 482 aa7.49□□□□□ -1.21
HDAC6-232ENST00000489053 MTCH1Q9NZJ7 389 aa7.49□□□□□ -1.21
HDAC6-232ENST00000489053 CKLFQ9UBR5 152 aa7.49□□□□□ -1.21
HDAC6-232ENST00000489053 MYRFQ9Y2G1 1151 aa7.49□□□□□ -1.21
HDAC6-232ENST00000489053 GSTK1Q9Y2Q3 226 aa7.49□□□□□ -1.21
HDAC6-232ENST00000489053 EXOSC1Q9Y3B2 195 aaKnown RBP7.49□□□□□ -1.21
HDAC6-232ENST00000489053 OR4C45A6NMZ5 311 aa7.48□□□□□ -1.21
HDAC6-232ENST00000489053 J3QRE1 110 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms