RNA–Protein interactions for RNA: ENST00000484305.1

HDAC1-209, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-209ENST00000484305 ZFPL1O95159 310 aa10.56□□□□□ -0.72
HDAC1-209ENST00000484305 TK1P04183 234 aa10.56□□□□□ -0.72
HDAC1-209ENST00000484305 NPBWR2P48146 333 aa10.56□□□□□ -0.72
HDAC1-209ENST00000484305 POU3F4P49335 361 aa10.56□□□□□ -0.72
HDAC1-209ENST00000484305 GTF2A1P52655 376 aaPredicted RBP10.56□□□□□ -0.72
HDAC1-209ENST00000484305 RPL31P62899 125 aaKnown RBP10.56□□□□□ -0.72
HDAC1-209ENST00000484305 GUCA2AQ02747 115 aa10.56□□□□□ -0.72
HDAC1-209ENST00000484305 COL10A1Q03692 680 aa10.56□□□□□ -0.72
HDAC1-209ENST00000484305 OR4M1Q8NGD0 313 aa10.56□□□□□ -0.72
HDAC1-209ENST00000484305 PDCD1LG2Q9BQ51 273 aa10.56□□□□□ -0.72
HDAC1-209ENST00000484305 METTL8Q9H825 291 aaKnown RBP10.56□□□□□ -0.72
HDAC1-209ENST00000484305 UNKLQ9H9P5 680 aaKnown RBP10.56□□□□□ -0.72
HDAC1-209ENST00000484305 FGF20Q9NP95 211 aaPredicted RBP10.56□□□□□ -0.72
HDAC1-209ENST00000484305 IL36RNQ9UBH0 155 aa10.56□□□□□ -0.72
HDAC1-209ENST00000484305 FAM181BA6NEQ2 426 aa10.55□□□□□ -0.72
HDAC1-209ENST00000484305 H0YAE9 185 aa10.55□□□□□ -0.72
HDAC1-209ENST00000484305 K7N7A8 449 aa10.55□□□□□ -0.72
HDAC1-209ENST00000484305 NPFFO15130 113 aa10.55□□□□□ -0.72
HDAC1-209ENST00000484305 ZNF737O75373 536 aa10.55□□□□□ -0.72
HDAC1-209ENST00000484305 IGHV4-59P01825 116 aa10.55□□□□□ -0.72
HDAC1-209ENST00000484305 BCL3P20749 454 aa10.55□□□□□ -0.72
HDAC1-209ENST00000484305 PRKACBP22694 351 aa10.55□□□□□ -0.72
HDAC1-209ENST00000484305 OMGP23515 440 aa10.55□□□□□ -0.72
HDAC1-209ENST00000484305 IER3P46695 156 aa10.55□□□□□ -0.72
HDAC1-209ENST00000484305 ETV1P50549 477 aa10.55□□□□□ -0.72
HDAC1-209ENST00000484305 UBE2E1P51965 193 aa10.55□□□□□ -0.72
HDAC1-209ENST00000484305 GBX2P52951 348 aaPredicted RBP10.55□□□□□ -0.72
HDAC1-209ENST00000484305 ADARB1P78563 741 aaKnown RBP10.55□□□□□ -0.72
HDAC1-209ENST00000484305 BLMHQ13867 455 aa10.55□□□□□ -0.72
HDAC1-209ENST00000484305 XAF1Q6GPH4 301 aa10.55□□□□□ -0.72
HDAC1-209ENST00000484305 HCP5Q6MZN7 132 aa10.55□□□□□ -0.72
HDAC1-209ENST00000484305 FIP1L1Q6UN15 594 aaKnown RBP10.55□□□□□ -0.72
HDAC1-209ENST00000484305 LHFPL2Q6ZUX7 228 aa10.55□□□□□ -0.72
HDAC1-209ENST00000484305 MKXQ8IYA7 352 aa10.55□□□□□ -0.72
HDAC1-209ENST00000484305 C11orf42Q8N5U0 333 aa10.55□□□□□ -0.72
HDAC1-209ENST00000484305 TMEM86BQ8N661 226 aa10.55□□□□□ -0.72
HDAC1-209ENST00000484305 PACRGLQ8N7B6 248 aa10.55□□□□□ -0.72
HDAC1-209ENST00000484305 ASCC1Q8N9N2 400 aaKnown RBP10.55□□□□□ -0.72
HDAC1-209ENST00000484305 OR13C9Q8NGT0 318 aa10.55□□□□□ -0.72
HDAC1-209ENST00000484305 OR5AK2Q8NH90 309 aa10.55□□□□□ -0.72
HDAC1-209ENST00000484305 SSMEM1Q8WWF3 244 aa10.55□□□□□ -0.72
HDAC1-209ENST00000484305 RFT1Q96AA3 541 aa10.55□□□□□ -0.72
HDAC1-209ENST00000484305 OPALINQ96PE5 141 aa10.55□□□□□ -0.72
HDAC1-209ENST00000484305 SPACA5Q96QH8 159 aa10.55□□□□□ -0.72
HDAC1-209ENST00000484305 JAM3Q9BX67 310 aa10.55□□□□□ -0.72
HDAC1-209ENST00000484305 FAM234AQ9H0X4 552 aa10.55□□□□□ -0.72
HDAC1-209ENST00000484305 RBFOX1Q9NWB1 397 aaKnown RBP10.55□□□□□ -0.72
HDAC1-209ENST00000484305 FAM96BQ9Y3D0 163 aa10.55□□□□□ -0.72
HDAC1-209ENST00000484305 POMT1Q9Y6A1 747 aa10.55□□□□□ -0.72
HDAC1-209ENST00000484305 IGKV1-12A0A0C4DH73 117 aa10.54□□□□□ -0.72
HDAC1-209ENST00000484305 TRBV2A0A0J9YWF9 115 aa10.54□□□□□ -0.72
HDAC1-209ENST00000484305 TMEM212A6NML5 194 aa10.54□□□□□ -0.72
HDAC1-209ENST00000484305 IGKV1D-12P01611 117 aa10.54□□□□□ -0.72
HDAC1-209ENST00000484305 CHRM2P08172 466 aa10.54□□□□□ -0.72
HDAC1-209ENST00000484305 OCM2P0CE71 109 aa10.54□□□□□ -0.72
HDAC1-209ENST00000484305 OCMP0CE72 109 aaPredicted RBP10.54□□□□□ -0.72
HDAC1-209ENST00000484305 CALCBP10092 127 aa10.54□□□□□ -0.72
HDAC1-209ENST00000484305 PIPP12273 146 aaPredicted RBP10.54□□□□□ -0.72
HDAC1-209ENST00000484305 CCL3L1P16619 93 aa10.54□□□□□ -0.72
HDAC1-209ENST00000484305 EEF1B2P24534 225 aaKnown RBP10.54□□□□□ -0.72
HDAC1-209ENST00000484305 DCKP27707 260 aa10.54□□□□□ -0.72
HDAC1-209ENST00000484305 DUSP1P28562 367 aa10.54□□□□□ -0.72
HDAC1-209ENST00000484305 SAA4P35542 130 aa10.54□□□□□ -0.72
HDAC1-209ENST00000484305 ERVFRD-1P60508 538 aa10.54□□□□□ -0.72
HDAC1-209ENST00000484305 MRPL28Q13084 256 aaKnown RBP10.54□□□□□ -0.72
HDAC1-209ENST00000484305 PDZK1IP1Q13113 114 aa10.54□□□□□ -0.72
HDAC1-209ENST00000484305 ZNF273Q14593 569 aa10.54□□□□□ -0.72
HDAC1-209ENST00000484305 OR2G6Q5TZ20 316 aa10.54□□□□□ -0.72
HDAC1-209ENST00000484305 TTC23Q5W5X9 447 aa10.54□□□□□ -0.72
HDAC1-209ENST00000484305 NCR3LG1Q68D85 454 aa10.54□□□□□ -0.72
HDAC1-209ENST00000484305 CRIP3Q6Q6R5 217 aa10.54□□□□□ -0.72
HDAC1-209ENST00000484305 LDLRAD3Q86YD5 345 aa10.54□□□□□ -0.72
HDAC1-209ENST00000484305 Q8IYB0 196 aa10.54□□□□□ -0.72
HDAC1-209ENST00000484305 FAM58AQ8N1B3 248 aa10.54□□□□□ -0.72
HDAC1-209ENST00000484305 DHRSXQ8N5I4 330 aa10.54□□□□□ -0.72
HDAC1-209ENST00000484305 OR5D13Q8NGL4 314 aa10.54□□□□□ -0.72
HDAC1-209ENST00000484305 TBC1D15Q8TC07 691 aa10.54□□□□□ -0.72
HDAC1-209ENST00000484305 EMG1Q92979 244 aaKnown RBP10.54□□□□□ -0.72
HDAC1-209ENST00000484305 SPSB1Q96BD6 273 aa10.54□□□□□ -0.72
HDAC1-209ENST00000484305 COMMD4Q9H0A8 199 aa10.54□□□□□ -0.72
HDAC1-209ENST00000484305 ZCCHC4Q9H5U6 513 aa10.54□□□□□ -0.72
HDAC1-209ENST00000484305 C8orf4Q9NR00 106 aa10.54□□□□□ -0.72
HDAC1-209ENST00000484305 TMEM82A0PJX8 343 aa10.53□□□□□ -0.72
HDAC1-209ENST00000484305 MEX3AA1L020 520 aaKnown RBP10.53□□□□□ -0.72
HDAC1-209ENST00000484305 MEIOCA2RUB1 952 aa10.53□□□□□ -0.72
HDAC1-209ENST00000484305 CASQ2O14958 399 aaPredicted RBP10.53□□□□□ -0.72
HDAC1-209ENST00000484305 ANGPTL7O43827 346 aa10.53□□□□□ -0.72
HDAC1-209ENST00000484305 HAND1O96004 215 aa10.53□□□□□ -0.72
HDAC1-209ENST00000484305 CYB5AP00167 134 aa10.53□□□□□ -0.72
HDAC1-209ENST00000484305 MT-ND2P03891 347 aa10.53□□□□□ -0.72
HDAC1-209ENST00000484305 FBP1P09467 338 aa10.53□□□□□ -0.72
HDAC1-209ENST00000484305 GNAO1P09471 354 aa10.53□□□□□ -0.72
HDAC1-209ENST00000484305 CCDC159P0C7I6 412 aa10.53□□□□□ -0.72
HDAC1-209ENST00000484305 MDKP21741 143 aaPredicted RBP10.53□□□□□ -0.72
HDAC1-209ENST00000484305 SNU13P55769 128 aaKnown RBP10.53□□□□□ -0.72
HDAC1-209ENST00000484305 DLX6P56179 175 aa10.53□□□□□ -0.72
HDAC1-209ENST00000484305 OGFRL1Q5TC84 451 aaPredicted RBP10.53□□□□□ -0.72
HDAC1-209ENST00000484305 C17orf107Q6ZR85 190 aa10.53□□□□□ -0.72
HDAC1-209ENST00000484305 SERPINA12Q8IW75 414 aa10.53□□□□□ -0.72
HDAC1-209ENST00000484305 PARP16Q8N5Y8 322 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms