RNA–Protein interactions for RNA: ENST00000467464.1

PTPRF-211, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 3

Gene PTPRF, Length 571 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-211ENST00000467464 HEXA-AS1Q9H8Q6 139 aa9.7□□□□□ -0.86
PTPRF-211ENST00000467464 PLEKHA1Q9HB21 404 aa9.7□□□□□ -0.86
PTPRF-211ENST00000467464 SEBOXQ9HB31 216 aaPredicted RBP9.7□□□□□ -0.86
PTPRF-211ENST00000467464 FRRS1LQ9P0K9 344 aa9.7□□□□□ -0.86
PTPRF-211ENST00000467464 FBLN5Q9UBX5 448 aa9.7□□□□□ -0.86
PTPRF-211ENST00000467464 SIGLEC9Q9Y336 463 aa9.7□□□□□ -0.86
PTPRF-211ENST00000467464 MEX3AA1L020 520 aaKnown RBP9.69□□□□□ -0.86
PTPRF-211ENST00000467464 VGLL3A8MV65 326 aa9.69□□□□□ -0.86
PTPRF-211ENST00000467464 M0QZ24 198 aa9.69□□□□□ -0.86
PTPRF-211ENST00000467464 GATBO75879 557 aaKnown RBP9.69□□□□□ -0.86
PTPRF-211ENST00000467464 RBP4P02753 201 aa9.69□□□□□ -0.86
PTPRF-211ENST00000467464 GABRB1P18505 474 aa9.69□□□□□ -0.86
PTPRF-211ENST00000467464 COX7A1P24310 79 aa9.69□□□□□ -0.86
PTPRF-211ENST00000467464 NPBWR2P48146 333 aa9.69□□□□□ -0.86
PTPRF-211ENST00000467464 FUT6P51993 359 aa9.69□□□□□ -0.86
PTPRF-211ENST00000467464 OR12D2P58182 307 aa9.69□□□□□ -0.86
PTPRF-211ENST00000467464 CDC42P60953 191 aa9.69□□□□□ -0.86
PTPRF-211ENST00000467464 SNRPGP62308 76 aaKnown RBP9.69□□□□□ -0.86
PTPRF-211ENST00000467464 ZNF91Q05481 1191 aa9.69□□□□□ -0.86
PTPRF-211ENST00000467464 KPNB1Q14974 876 aaKnown RBP9.69□□□□□ -0.86
PTPRF-211ENST00000467464 LRRC75BQ2VPJ9 315 aa9.69□□□□□ -0.86
PTPRF-211ENST00000467464 PDLIM3Q53GG5 364 aaPredicted RBP9.69□□□□□ -0.86
PTPRF-211ENST00000467464 SLC25A26Q70HW3 274 aa9.69□□□□□ -0.86
PTPRF-211ENST00000467464 UTS2BQ765I0 119 aa9.69□□□□□ -0.86
PTPRF-211ENST00000467464 RNF144BQ7Z419 303 aa9.69□□□□□ -0.86
PTPRF-211ENST00000467464 OR8H2Q8N162 312 aa9.69□□□□□ -0.86
PTPRF-211ENST00000467464 ASCC1Q8N9N2 400 aaKnown RBP9.69□□□□□ -0.86
PTPRF-211ENST00000467464 DNAAF1Q8NEP3 725 aa9.69□□□□□ -0.86
PTPRF-211ENST00000467464 OR52N4Q8NGI2 321 aa9.69□□□□□ -0.86
PTPRF-211ENST00000467464 OR10AC1Q8NH08 325 aa9.69□□□□□ -0.86
PTPRF-211ENST00000467464 TRUB1Q8WWH5 349 aaKnown RBP9.69□□□□□ -0.86
PTPRF-211ENST00000467464 PP6455Q8WZ26 134 aa9.69□□□□□ -0.86
PTPRF-211ENST00000467464 RFKQ969G6 155 aa9.69□□□□□ -0.86
PTPRF-211ENST00000467464 MBOAT4Q96T53 435 aa9.69□□□□□ -0.86
PTPRF-211ENST00000467464 TCF7L1Q9HCS4 588 aa9.69□□□□□ -0.86
PTPRF-211ENST00000467464 GNG8Q9UK08 70 aa9.69□□□□□ -0.86
PTPRF-211ENST00000467464 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9.69□□□□□ -0.86
PTPRF-211ENST00000467464 SLC7A11Q9UPY5 501 aa9.69□□□□□ -0.86
PTPRF-211ENST00000467464 PRKDCP78527 4128 aaKnown RBP9.68□□□□□ -0.86
PTPRF-211ENST00000467464 A0A1W2PPH5 198 aa9.68□□□□□ -0.86
PTPRF-211ENST00000467464 SLC16A6O15403 523 aa9.68□□□□□ -0.86
PTPRF-211ENST00000467464 PSPNO60542 156 aa9.68□□□□□ -0.86
PTPRF-211ENST00000467464 CIB2O75838 187 aa9.68□□□□□ -0.86
PTPRF-211ENST00000467464 INMTO95050 263 aa9.68□□□□□ -0.86
PTPRF-211ENST00000467464 IGHA1P01876 353 aa9.68□□□□□ -0.86
PTPRF-211ENST00000467464 ISG15P05161 165 aa9.68□□□□□ -0.86
PTPRF-211ENST00000467464 CHRM2P08172 466 aa9.68□□□□□ -0.86
PTPRF-211ENST00000467464 ZNF728P0DKX0 622 aa9.68□□□□□ -0.86
PTPRF-211ENST00000467464 ATP6V1E1P36543 226 aa9.68□□□□□ -0.86
PTPRF-211ENST00000467464 LY6EQ16553 131 aa9.68□□□□□ -0.86
PTPRF-211ENST00000467464 ZNF626Q68DY1 528 aa9.68□□□□□ -0.86
PTPRF-211ENST00000467464 OR11H6Q8NGC7 330 aa9.68□□□□□ -0.86
PTPRF-211ENST00000467464 OR51A4Q8NGJ6 313 aa9.68□□□□□ -0.86
PTPRF-211ENST00000467464 RNFT2Q96EX2 444 aa9.68□□□□□ -0.86
PTPRF-211ENST00000467464 PELI1Q96FA3 418 aa9.68□□□□□ -0.86
PTPRF-211ENST00000467464 BORCS8Q96FH0 119 aa9.68□□□□□ -0.86
PTPRF-211ENST00000467464 SNX22Q96L94 193 aa9.68□□□□□ -0.86
PTPRF-211ENST00000467464 ZNF649Q9BS31 505 aa9.68□□□□□ -0.86
PTPRF-211ENST00000467464 RBFOX1Q9NWB1 397 aaKnown RBP9.68□□□□□ -0.86
PTPRF-211ENST00000467464 AASSQ9UDR5 926 aa9.68□□□□□ -0.86
PTPRF-211ENST00000467464 EXOGQ9Y2C4 368 aaKnown RBP9.68□□□□□ -0.86
PTPRF-211ENST00000467464 IGKV1-12A0A0C4DH73 117 aa9.67□□□□□ -0.86
PTPRF-211ENST00000467464 TRBV2A0A0J9YWF9 115 aa9.67□□□□□ -0.86
PTPRF-211ENST00000467464 OR4C45A6NMZ5 311 aa9.67□□□□□ -0.86
PTPRF-211ENST00000467464 IGKV1D-12P01611 117 aa9.67□□□□□ -0.86
PTPRF-211ENST00000467464 IGHV1-8P0DP01 117 aa9.67□□□□□ -0.86
PTPRF-211ENST00000467464 ATF1P18846 271 aa9.67□□□□□ -0.86
PTPRF-211ENST00000467464 BCL3P20749 454 aa9.67□□□□□ -0.86
PTPRF-211ENST00000467464 AZGP1P25311 298 aaKnown RBP9.67□□□□□ -0.86
PTPRF-211ENST00000467464 GABRA5P31644 462 aa9.67□□□□□ -0.86
PTPRF-211ENST00000467464 KIR2DS4P43632 304 aa9.67□□□□□ -0.86
PTPRF-211ENST00000467464 RBP2P50120 134 aa9.67□□□□□ -0.86
PTPRF-211ENST00000467464 ALDH3A2P51648 485 aa9.67□□□□□ -0.86
PTPRF-211ENST00000467464 CCR9P51686 369 aa9.67□□□□□ -0.86
PTPRF-211ENST00000467464 ACTC1P68032 377 aa9.67□□□□□ -0.86
PTPRF-211ENST00000467464 ACTA1P68133 377 aa9.67□□□□□ -0.86
PTPRF-211ENST00000467464 ZNF146Q15072 292 aa9.67□□□□□ -0.86
PTPRF-211ENST00000467464 CNN3Q15417 329 aaKnown RBP9.67□□□□□ -0.86
PTPRF-211ENST00000467464 TMEM244Q5VVB8 128 aa9.67□□□□□ -0.86
PTPRF-211ENST00000467464 HIST2H2BDQ6DRA6 164 aa9.67□□□□□ -0.86
PTPRF-211ENST00000467464 CCBE1Q6UXH8 406 aaPredicted RBP9.67□□□□□ -0.86
PTPRF-211ENST00000467464 FAM220AQ7Z4H9 259 aa9.67□□□□□ -0.86
PTPRF-211ENST00000467464 EGFL6Q8IUX8 553 aa9.67□□□□□ -0.86
PTPRF-211ENST00000467464 TPRX1Q8N7U7 411 aa9.67□□□□□ -0.86
PTPRF-211ENST00000467464 CFHR4Q92496 578 aa9.67□□□□□ -0.86
PTPRF-211ENST00000467464 LGALS12Q96DT0 336 aa9.67□□□□□ -0.86
PTPRF-211ENST00000467464 RANBP3Q9H6Z4 567 aaPredicted RBP9.67□□□□□ -0.86
PTPRF-211ENST00000467464 ZNF702PQ9H963 129 aa9.67□□□□□ -0.86
PTPRF-211ENST00000467464 IMPAD1Q9NX62 359 aa9.67□□□□□ -0.86
PTPRF-211ENST00000467464 HAND1O96004 215 aa9.66□□□□□ -0.86
PTPRF-211ENST00000467464 MT-ND2P03891 347 aa9.66□□□□□ -0.86
PTPRF-211ENST00000467464 DUSP1P28562 367 aa9.66□□□□□ -0.86
PTPRF-211ENST00000467464 OR3A1P47881 315 aa9.66□□□□□ -0.86
PTPRF-211ENST00000467464 EDDM3BP56851 147 aa9.66□□□□□ -0.86
PTPRF-211ENST00000467464 MEF2CQ06413 473 aaPredicted RBP9.66□□□□□ -0.86
PTPRF-211ENST00000467464 ZIK1Q3SY52 487 aaPredicted RBP9.66□□□□□ -0.86
PTPRF-211ENST00000467464 MEDAGQ5VYS4 303 aa9.66□□□□□ -0.86
PTPRF-211ENST00000467464 ZFP1Q6P2D0 407 aa9.66□□□□□ -0.86
PTPRF-211ENST00000467464 KCTD20Q7Z5Y7 419 aa9.66□□□□□ -0.86
PTPRF-211ENST00000467464 Q8IYB0 196 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 164.7 ms