RNA–Protein interactions for RNA: ENST00000460264.5

COL5A1-203, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 913 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-203ENST00000460264 MIDNQ504T8 468 aa15.44■□□□□ 0.06
COL5A1-203ENST00000460264 OLFML2AQ68BL7 652 aa15.44■□□□□ 0.06
COL5A1-203ENST00000460264 GDPGP1Q6ZNW5 385 aa15.44■□□□□ 0.06
COL5A1-203ENST00000460264 UTS2BQ765I0 119 aa15.44■□□□□ 0.06
COL5A1-203ENST00000460264 MKXQ8IYA7 352 aa15.44■□□□□ 0.06
COL5A1-203ENST00000460264 C11orf42Q8N5U0 333 aa15.44■□□□□ 0.06
COL5A1-203ENST00000460264 ASCC1Q8N9N2 400 aaKnown RBP15.44■□□□□ 0.06
COL5A1-203ENST00000460264 OR51A4Q8NGJ6 313 aa15.44■□□□□ 0.06
COL5A1-203ENST00000460264 OR10AC1Q8NH08 325 aa15.44■□□□□ 0.06
COL5A1-203ENST00000460264 RHOXF1Q8NHV9 184 aa15.44■□□□□ 0.06
COL5A1-203ENST00000460264 MRPL48Q96GC5 212 aaKnown RBP15.44■□□□□ 0.06
COL5A1-203ENST00000460264 ZNF696Q9H7X3 374 aa15.44■□□□□ 0.06
COL5A1-203ENST00000460264 VPREB3Q9UKI3 123 aa15.44■□□□□ 0.06
COL5A1-203ENST00000460264 SF3B6Q9Y3B4 125 aaKnown RBP15.44■□□□□ 0.06
COL5A1-203ENST00000460264 BTBD17A6NE02 478 aa15.43■□□□□ 0.06
COL5A1-203ENST00000460264 OR4C45A6NMZ5 311 aa15.43■□□□□ 0.06
COL5A1-203ENST00000460264 IGHA1P01876 353 aa15.43■□□□□ 0.06
COL5A1-203ENST00000460264 CCL3L1P16619 93 aa15.43■□□□□ 0.06
COL5A1-203ENST00000460264 AZGP1P25311 298 aaKnown RBP15.43■□□□□ 0.06
COL5A1-203ENST00000460264 RBP2P50120 134 aa15.43■□□□□ 0.06
COL5A1-203ENST00000460264 ATP1B3P54709 279 aa15.43■□□□□ 0.06
COL5A1-203ENST00000460264 GALEQ14376 348 aa15.43■□□□□ 0.06
COL5A1-203ENST00000460264 LHFPL3Q86UP9 236 aa15.43■□□□□ 0.06
COL5A1-203ENST00000460264 C17orf50Q8WW18 174 aa15.43■□□□□ 0.06
COL5A1-203ENST00000460264 FGGYQ96C11 551 aa15.43■□□□□ 0.06
COL5A1-203ENST00000460264 Q96MT0 163 aa15.43■□□□□ 0.06
COL5A1-203ENST00000460264 ALG8Q9BVK2 526 aa15.43■□□□□ 0.06
COL5A1-203ENST00000460264 AMBNQ9NP70 447 aa15.43■□□□□ 0.06
COL5A1-203ENST00000460264 FAM118AQ9NWS6 357 aa15.43■□□□□ 0.06
COL5A1-203ENST00000460264 HHLA2Q9UM44 414 aa15.43■□□□□ 0.06
COL5A1-203ENST00000460264 MYRFQ9Y2G1 1151 aa15.43■□□□□ 0.06
COL5A1-203ENST00000460264 LOC100130705A0A1B0GUX0 176 aa15.42■□□□□ 0.06
COL5A1-203ENST00000460264 CLPSL1A2RUU4 121 aa15.42■□□□□ 0.06
COL5A1-203ENST00000460264 INMTO95050 263 aa15.42■□□□□ 0.06
COL5A1-203ENST00000460264 FADS2O95864 444 aaKnown RBP15.42■□□□□ 0.06
COL5A1-203ENST00000460264 CHRM2P08172 466 aa15.42■□□□□ 0.06
COL5A1-203ENST00000460264 PIPP12273 146 aaPredicted RBP15.42■□□□□ 0.06
COL5A1-203ENST00000460264 ATF1P18846 271 aa15.42■□□□□ 0.06
COL5A1-203ENST00000460264 PRKACBP22694 351 aa15.42■□□□□ 0.06
COL5A1-203ENST00000460264 POU3F4P49335 361 aa15.42■□□□□ 0.06
COL5A1-203ENST00000460264 ALKBH1Q13686 389 aaKnown RBP15.42■□□□□ 0.06
COL5A1-203ENST00000460264 EGFL6Q8IUX8 553 aa15.42■□□□□ 0.06
COL5A1-203ENST00000460264 Q8IYB0 196 aa15.42■□□□□ 0.06
COL5A1-203ENST00000460264 SYS1Q8N2H4 156 aa15.42■□□□□ 0.06
COL5A1-203ENST00000460264 BEND2Q8NDZ0 799 aa15.42■□□□□ 0.06
COL5A1-203ENST00000460264 OR13C3Q8NGS6 347 aa15.42■□□□□ 0.06
COL5A1-203ENST00000460264 OR5R1Q8NH85 324 aa15.42■□□□□ 0.06
COL5A1-203ENST00000460264 EMG1Q92979 244 aaKnown RBP15.42■□□□□ 0.06
COL5A1-203ENST00000460264 SPSB1Q96BD6 273 aa15.42■□□□□ 0.06
COL5A1-203ENST00000460264 AJUBAQ96IF1 538 aa15.42■□□□□ 0.06
COL5A1-203ENST00000460264 ISG20L2Q9H9L3 353 aaKnown RBP15.42■□□□□ 0.06
COL5A1-203ENST00000460264 RBFOX1Q9NWB1 397 aaKnown RBP15.42■□□□□ 0.06
COL5A1-203ENST00000460264 IL36RNQ9UBH0 155 aa15.42■□□□□ 0.06
COL5A1-203ENST00000460264 MEGF8Q7Z7M0 2845 aa15.41■□□□□ 0.06
COL5A1-203ENST00000460264 TRBV2A0A0J9YWF9 115 aa15.41■□□□□ 0.06
COL5A1-203ENST00000460264 hCG_1809904A0A1W2PP81 198 aa15.41■□□□□ 0.06
COL5A1-203ENST00000460264 A0A1W2PPE2 198 aa15.41■□□□□ 0.06
COL5A1-203ENST00000460264 A0A1W2PR64 198 aa15.41■□□□□ 0.06
COL5A1-203ENST00000460264 A0A1W2PRV1 198 aa15.41■□□□□ 0.06
COL5A1-203ENST00000460264 DLX6P56179 175 aa15.41■□□□□ 0.06
COL5A1-203ENST00000460264 MTCP1P56278 107 aa15.41■□□□□ 0.06
COL5A1-203ENST00000460264 SRSF4Q08170 494 aaKnown RBP15.41■□□□□ 0.06
COL5A1-203ENST00000460264 LHFPL2Q6ZUX7 228 aa15.41■□□□□ 0.06
COL5A1-203ENST00000460264 OR8H2Q8N162 312 aa15.41■□□□□ 0.06
COL5A1-203ENST00000460264 LINC01006Q8NI28 216 aa15.41■□□□□ 0.06
COL5A1-203ENST00000460264 APH1BQ8WW43 257 aa15.41■□□□□ 0.06
COL5A1-203ENST00000460264 OPALINQ96PE5 141 aa15.41■□□□□ 0.06
COL5A1-203ENST00000460264 MYCBPQ99417 103 aaPredicted RBP15.41■□□□□ 0.06
COL5A1-203ENST00000460264 ZNF649Q9BS31 505 aa15.41■□□□□ 0.06
COL5A1-203ENST00000460264 HEXA-AS1Q9H8Q6 139 aa15.41■□□□□ 0.06
COL5A1-203ENST00000460264 INPP5EQ9NRR6 644 aa15.41■□□□□ 0.06
COL5A1-203ENST00000460264 ERVK13-1Q9NX77 482 aa15.41■□□□□ 0.06
COL5A1-203ENST00000460264 TRRAPQ9Y4A5 3859 aa15.4■□□□□ 0.06
COL5A1-203ENST00000460264 TMEM82A0PJX8 343 aa15.4■□□□□ 0.06
COL5A1-203ENST00000460264 HAND1O96004 215 aa15.4■□□□□ 0.06
COL5A1-203ENST00000460264 BCL3P20749 454 aa15.4■□□□□ 0.06
COL5A1-203ENST00000460264 COX7A1P24310 79 aa15.4■□□□□ 0.06
COL5A1-203ENST00000460264 NPBWR2P48146 333 aa15.4■□□□□ 0.06
COL5A1-203ENST00000460264 ERVFRD-1P60508 538 aa15.4■□□□□ 0.06
COL5A1-203ENST00000460264 RAB40BQ12829 278 aa15.4■□□□□ 0.06
COL5A1-203ENST00000460264 ZSCAN26Q16670 478 aa15.4■□□□□ 0.06
COL5A1-203ENST00000460264 DHRS7BQ6IAN0 325 aaPredicted RBP15.4■□□□□ 0.06
COL5A1-203ENST00000460264 C17orf107Q6ZR85 190 aa15.4■□□□□ 0.06
COL5A1-203ENST00000460264 GDPD3Q7L5L3 318 aa15.4■□□□□ 0.06
COL5A1-203ENST00000460264 FAM58AQ8N1B3 248 aa15.4■□□□□ 0.06
COL5A1-203ENST00000460264 ZNF676Q8N7Q3 588 aa15.4■□□□□ 0.06
COL5A1-203ENST00000460264 ZSCAN4Q8NAM6 433 aaPredicted RBP15.4■□□□□ 0.06
COL5A1-203ENST00000460264 OR52I1Q8NGK6 324 aa15.4■□□□□ 0.06
COL5A1-203ENST00000460264 SEBOXQ9HB31 216 aaPredicted RBP15.4■□□□□ 0.06
COL5A1-203ENST00000460264 MRPS18AQ9NVS2 196 aaKnown RBP15.4■□□□□ 0.06
COL5A1-203ENST00000460264 SMPD3Q9NY59 655 aaPredicted RBP15.4■□□□□ 0.06
COL5A1-203ENST00000460264 C17orf98A8MV24 154 aa15.39■□□□□ 0.05
COL5A1-203ENST00000460264 H3BUX3 64 aa15.39■□□□□ 0.05
COL5A1-203ENST00000460264 ZFPL1O95159 310 aa15.39■□□□□ 0.05
COL5A1-203ENST00000460264 BAG2O95816 211 aa15.39■□□□□ 0.05
COL5A1-203ENST00000460264 CYB5AP00167 134 aa15.39■□□□□ 0.05
COL5A1-203ENST00000460264 MT-ND2P03891 347 aa15.39■□□□□ 0.05
COL5A1-203ENST00000460264 BMXP51813 675 aa15.39■□□□□ 0.05
COL5A1-203ENST00000460264 EDDM3BP56851 147 aa15.39■□□□□ 0.05
COL5A1-203ENST00000460264 PDZK1IP1Q13113 114 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 115.1 ms