RNA–Protein interactions for RNA: ENST00000453858.1

SBDSP1-204, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

BASIC

Gene SBDSP1, Length 737 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-204ENST00000453858 ATAD3AQ9NVI7 634 aa3.77□□□□□ -1.81
SBDSP1-204ENST00000453858 CHCHD3Q9NX63 227 aaKnown RBP3.77□□□□□ -1.81
SBDSP1-204ENST00000453858 GIMAP2Q9UG22 337 aa3.77□□□□□ -1.81
SBDSP1-204ENST00000453858 HAO1Q9UJM8 370 aa3.77□□□□□ -1.81
SBDSP1-204ENST00000453858 LOC102724200A0A096LPH7 203 aaPredicted RBP3.76□□□□□ -1.81
SBDSP1-204ENST00000453858 IGHV2-26A0A0B4J1V2 119 aa3.76□□□□□ -1.81
SBDSP1-204ENST00000453858 IGHV4-28A0A0C4DH34 117 aa3.76□□□□□ -1.81
SBDSP1-204ENST00000453858 EXOC1LA0A1B0GW35 172 aa3.76□□□□□ -1.81
SBDSP1-204ENST00000453858 PGPEP1LA6NFU8 196 aa3.76□□□□□ -1.81
SBDSP1-204ENST00000453858 CD300LBA8K4G0 201 aa3.76□□□□□ -1.81
SBDSP1-204ENST00000453858 SMTNL1A8MU46 457 aa3.76□□□□□ -1.81
SBDSP1-204ENST00000453858 POLR3GO15318 223 aaPredicted RBP3.76□□□□□ -1.81
SBDSP1-204ENST00000453858 SCGB1D1O95968 90 aa3.76□□□□□ -1.81
SBDSP1-204ENST00000453858 MBD3O95983 291 aa3.76□□□□□ -1.81
SBDSP1-204ENST00000453858 IFNA14P01570 189 aa3.76□□□□□ -1.81
SBDSP1-204ENST00000453858 IGLV1-47P01700 117 aa3.76□□□□□ -1.81
SBDSP1-204ENST00000453858 DBIP07108 87 aaKnown RBP3.76□□□□□ -1.81
SBDSP1-204ENST00000453858 CSN3P07498 182 aa3.76□□□□□ -1.81
SBDSP1-204ENST00000453858 FAM106CPP0CH98 169 aa3.76□□□□□ -1.81
SBDSP1-204ENST00000453858 ACADSP16219 412 aa3.76□□□□□ -1.81
SBDSP1-204ENST00000453858 IL7RP16871 459 aa3.76□□□□□ -1.81
SBDSP1-204ENST00000453858 MDH1P40925 334 aaKnown RBP3.76□□□□□ -1.81
SBDSP1-204ENST00000453858 AMTP48728 403 aa3.76□□□□□ -1.81
SBDSP1-204ENST00000453858 KRTAP10-4P60372 401 aaPredicted RBP3.76□□□□□ -1.81
SBDSP1-204ENST00000453858 ACTA2P62736 377 aa3.76□□□□□ -1.81
SBDSP1-204ENST00000453858 ACTG2P63267 376 aa3.76□□□□□ -1.81
SBDSP1-204ENST00000453858 CSNK2BP67870 215 aa3.76□□□□□ -1.81
SBDSP1-204ENST00000453858 ACTC1P68032 377 aa3.76□□□□□ -1.81
SBDSP1-204ENST00000453858 ACTA1P68133 377 aa3.76□□□□□ -1.81
SBDSP1-204ENST00000453858 BDH1Q02338 343 aa3.76□□□□□ -1.81
SBDSP1-204ENST00000453858 FMODQ06828 376 aa3.76□□□□□ -1.81
SBDSP1-204ENST00000453858 KLF5Q13887 457 aaPredicted RBP3.76□□□□□ -1.81
SBDSP1-204ENST00000453858 SYPL1Q16563 259 aa3.76□□□□□ -1.81
SBDSP1-204ENST00000453858 STX1AQ16623 288 aa3.76□□□□□ -1.81
SBDSP1-204ENST00000453858 DEFB135Q30KP9 77 aa3.76□□□□□ -1.81
SBDSP1-204ENST00000453858 UNC50Q53HI1 259 aa3.76□□□□□ -1.81
SBDSP1-204ENST00000453858 ARMC4Q5T2S8 1044 aa3.76□□□□□ -1.81
SBDSP1-204ENST00000453858 LCN12Q6JVE5 192 aa3.76□□□□□ -1.81
SBDSP1-204ENST00000453858 ZCCHC23Q6ZST2 131 aa3.76□□□□□ -1.81
SBDSP1-204ENST00000453858 GPRIN3Q6ZVF9 776 aa3.76□□□□□ -1.81
SBDSP1-204ENST00000453858 CPLX4Q7Z7G2 160 aa3.76□□□□□ -1.81
SBDSP1-204ENST00000453858 C6orf223Q8N319 242 aa3.76□□□□□ -1.81
SBDSP1-204ENST00000453858 NOXO1Q8NFA2 376 aa3.76□□□□□ -1.81
SBDSP1-204ENST00000453858 OR5J2Q8NH18 312 aa3.76□□□□□ -1.81
SBDSP1-204ENST00000453858 MOSPD2Q8NHP6 518 aa3.76□□□□□ -1.81
SBDSP1-204ENST00000453858 NDNFQ8TB73 568 aa3.76□□□□□ -1.81
SBDSP1-204ENST00000453858 FBXO25Q8TCJ0 367 aa3.76□□□□□ -1.81
SBDSP1-204ENST00000453858 RCN3Q96D15 328 aa3.76□□□□□ -1.81
SBDSP1-204ENST00000453858 CPNE1Q99829 537 aa3.76□□□□□ -1.81
SBDSP1-204ENST00000453858 CCT7Q99832 543 aa3.76□□□□□ -1.81
SBDSP1-204ENST00000453858 ERP44Q9BS26 406 aa3.76□□□□□ -1.81
SBDSP1-204ENST00000453858 ADAT1Q9BUB4 502 aaKnown RBP3.76□□□□□ -1.81
SBDSP1-204ENST00000453858 DPY30Q9C005 99 aa3.76□□□□□ -1.81
SBDSP1-204ENST00000453858 AASSQ9UDR5 926 aa3.76□□□□□ -1.81
SBDSP1-204ENST00000453858 GUCA1BQ9UMX6 200 aa3.76□□□□□ -1.81
SBDSP1-204ENST00000453858 A0A1B0GWA3 101 aa3.75□□□□□ -1.81
SBDSP1-204ENST00000453858 OR2AT4A6NND4 320 aa3.75□□□□□ -1.81
SBDSP1-204ENST00000453858 C12orf71A8MTZ7 269 aa3.75□□□□□ -1.81
SBDSP1-204ENST00000453858 TMEM114B3SHH9 223 aa3.75□□□□□ -1.81
SBDSP1-204ENST00000453858 NPIPB11E5RHQ5 1161 aa3.75□□□□□ -1.81
SBDSP1-204ENST00000453858 HMGN4O00479 90 aa3.75□□□□□ -1.81
SBDSP1-204ENST00000453858 CDIPTO14735 213 aa3.75□□□□□ -1.81
SBDSP1-204ENST00000453858 SGCEO43556 437 aa3.75□□□□□ -1.81
SBDSP1-204ENST00000453858 AHCYL1O43865 530 aa3.75□□□□□ -1.81
SBDSP1-204ENST00000453858 GAGE7O76087 117 aa3.75□□□□□ -1.81
SBDSP1-204ENST00000453858 AMBPP02760 352 aa3.75□□□□□ -1.81
SBDSP1-204ENST00000453858 HSPB1P04792 205 aaKnown RBP3.75□□□□□ -1.81
SBDSP1-204ENST00000453858 GAGE12FP0CL80 117 aa3.75□□□□□ -1.81
SBDSP1-204ENST00000453858 GAGE12GP0CL81 117 aa3.75□□□□□ -1.81
SBDSP1-204ENST00000453858 GAGE12IP0CL82 117 aa3.75□□□□□ -1.81
SBDSP1-204ENST00000453858 ZNF728P0DKX0 622 aa3.75□□□□□ -1.81
SBDSP1-204ENST00000453858 PSG2P11465 335 aa3.75□□□□□ -1.81
SBDSP1-204ENST00000453858 HTR2AP28223 471 aa3.75□□□□□ -1.81
SBDSP1-204ENST00000453858 FUSP35637 526 aaKnown RBP eCLIP3.75□□□□□ -1.81
SBDSP1-204ENST00000453858 NPBWR2P48146 333 aa3.75□□□□□ -1.81
SBDSP1-204ENST00000453858 RAB40BQ12829 278 aa3.75□□□□□ -1.81
SBDSP1-204ENST00000453858 GAGE1Q13065 139 aa3.75□□□□□ -1.81
SBDSP1-204ENST00000453858 GAGE4Q13068 117 aa3.75□□□□□ -1.81
SBDSP1-204ENST00000453858 RFTN2Q52LD8 501 aaPredicted RBP3.75□□□□□ -1.81
SBDSP1-204ENST00000453858 C6orf141Q5SZD1 244 aa3.75□□□□□ -1.81
SBDSP1-204ENST00000453858 ATAD3BQ5T9A4 648 aa3.75□□□□□ -1.81
SBDSP1-204ENST00000453858 TNFAIP8L2Q6P589 184 aaPredicted RBP3.75□□□□□ -1.81
SBDSP1-204ENST00000453858 LRRC74BQ6ZQY2 392 aa3.75□□□□□ -1.81
SBDSP1-204ENST00000453858 CYS1Q717R9 158 aa3.75□□□□□ -1.81
SBDSP1-204ENST00000453858 TCF23Q7RTU1 214 aa3.75□□□□□ -1.81
SBDSP1-204ENST00000453858 PARP16Q8N5Y8 322 aa3.75□□□□□ -1.81
SBDSP1-204ENST00000453858 IQCF1Q8N6M8 205 aa3.75□□□□□ -1.81
SBDSP1-204ENST00000453858 PRR26Q8N8Z3 221 aa3.75□□□□□ -1.81
SBDSP1-204ENST00000453858 OR1M1Q8NGA1 313 aa3.75□□□□□ -1.81
SBDSP1-204ENST00000453858 OR1F12Q8NHA8 337 aa3.75□□□□□ -1.81
SBDSP1-204ENST00000453858 TMEM68Q96MH6 324 aa3.75□□□□□ -1.81
SBDSP1-204ENST00000453858 C11orf68Q9H3H3 251 aaKnown RBP3.75□□□□□ -1.81
SBDSP1-204ENST00000453858 SP140LQ9H930 580 aa3.75□□□□□ -1.81
SBDSP1-204ENST00000453858 PLSCR3Q9NRY6 295 aa3.75□□□□□ -1.81
SBDSP1-204ENST00000453858 OR6C3Q9NZP0 311 aa3.75□□□□□ -1.81
SBDSP1-204ENST00000453858 STK38LQ9Y2H1 464 aa3.75□□□□□ -1.81
SBDSP1-204ENST00000453858 NOP16Q9Y3C1 178 aaKnown RBP3.75□□□□□ -1.81
SBDSP1-204ENST00000453858 SSPOA2VEC9 5147 aa3.74□□□□□ -1.81
SBDSP1-204ENST00000453858 ARPC1BO15143 372 aaKnown RBP3.74□□□□□ -1.81
SBDSP1-204ENST00000453858 SLC22A2O15244 555 aa3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms