RNA–Protein interactions for RNA: ENST00000400227.7

CSNK2A1-204, Transcript of casein kinase 2 alpha 1, humanhuman

TSL 1 (best) BASIC

Gene CSNK2A1, Length 1,499 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK2A1-204ENST00000400227 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP5.85□□□□□ -1.471e-7■■■■■ 35.3
CSNK2A1-204ENST00000400227 COQ3Q9NZJ6 369 aa5.85□□□□□ -1.47
CSNK2A1-204ENST00000400227 COMMD9Q9P000 198 aa5.85□□□□□ -1.47
CSNK2A1-204ENST00000400227 SHPKQ9UHJ6 478 aa5.85□□□□□ -1.47
CSNK2A1-204ENST00000400227 GPR132Q9UNW8 380 aa5.85□□□□□ -1.47
CSNK2A1-204ENST00000400227 V9GYS6 101 aa5.85□□□□□ -1.47
CSNK2A1-204ENST00000400227 LOC100509620A0A075B734 347 aa5.84□□□□□ -1.47
CSNK2A1-204ENST00000400227 TRBV6-7A0A0A0MS04 114 aa5.84□□□□□ -1.47
CSNK2A1-204ENST00000400227 A0A1W2PP11 408 aa5.84□□□□□ -1.47
CSNK2A1-204ENST00000400227 TEX46H3BTG2 121 aa5.84□□□□□ -1.47
CSNK2A1-204ENST00000400227 TLX3O43711 291 aaPredicted RBP5.84□□□□□ -1.47
CSNK2A1-204ENST00000400227 SFT2D2O95562 160 aa5.84□□□□□ -1.47
CSNK2A1-204ENST00000400227 IFNA6P05013 189 aa5.84□□□□□ -1.47
CSNK2A1-204ENST00000400227 CRHP06850 196 aa5.84□□□□□ -1.47
CSNK2A1-204ENST00000400227 DCNP07585 359 aaKnown RBP5.84□□□□□ -1.47
CSNK2A1-204ENST00000400227 UMODP07911 640 aa5.84□□□□□ -1.47
CSNK2A1-204ENST00000400227 MSR1P21757 451 aa5.84□□□□□ -1.47
CSNK2A1-204ENST00000400227 CBX5P45973 191 aa5.84□□□□□ -1.47
CSNK2A1-204ENST00000400227 CSNK1A1P48729 337 aa5.84□□□□□ -1.47
CSNK2A1-204ENST00000400227 DHPSP49366 369 aaPredicted RBP5.84□□□□□ -1.47
CSNK2A1-204ENST00000400227 SUCLG1P53597 346 aaKnown RBP5.84□□□□□ -1.47
CSNK2A1-204ENST00000400227 CFHR3Q02985 330 aa5.84□□□□□ -1.47
CSNK2A1-204ENST00000400227 RSPO1Q2MKA7 263 aaPredicted RBP5.84□□□□□ -1.47
CSNK2A1-204ENST00000400227 LYSMD4Q5XG99 296 aa5.84□□□□□ -1.47
CSNK2A1-204ENST00000400227 NSUN5P2Q63ZY6 315 aa5.84□□□□□ -1.47
CSNK2A1-204ENST00000400227 LHFPL1Q86WI0 220 aa5.84□□□□□ -1.47
CSNK2A1-204ENST00000400227 ZNF283Q8N7M2 679 aa5.84□□□□□ -1.47
CSNK2A1-204ENST00000400227 OR56B1Q8NGI3 324 aa5.84□□□□□ -1.47
CSNK2A1-204ENST00000400227 TERB2Q8NHR7 220 aa5.84□□□□□ -1.47
CSNK2A1-204ENST00000400227 MAFAQ8NHW3 353 aaPredicted RBP5.84□□□□□ -1.47
CSNK2A1-204ENST00000400227 MARCH1Q8TCQ1 289 aa5.84□□□□□ -1.47
CSNK2A1-204ENST00000400227 CASTOR1Q8WTX7 329 aa5.84□□□□□ -1.47
CSNK2A1-204ENST00000400227 NABP1Q96AH0 204 aa5.84□□□□□ -1.47
CSNK2A1-204ENST00000400227 RAB3CQ96E17 227 aa5.84□□□□□ -1.47
CSNK2A1-204ENST00000400227 PHYHIPLQ96FC7 376 aa5.84□□□□□ -1.47
CSNK2A1-204ENST00000400227 PGAM5Q96HS1 289 aa5.84□□□□□ -1.47
CSNK2A1-204ENST00000400227 TMEM41AQ96HV5 264 aa5.84□□□□□ -1.47
CSNK2A1-204ENST00000400227 ARHGAP5-AS1Q96IT6 56 aa5.84□□□□□ -1.47
CSNK2A1-204ENST00000400227 IMMP1LQ96LU5 166 aa5.84□□□□□ -1.47
CSNK2A1-204ENST00000400227 ZNF75AQ96N20 296 aa5.84□□□□□ -1.47
CSNK2A1-204ENST00000400227 PDCD10Q9BUL8 212 aa5.84□□□□□ -1.47
CSNK2A1-204ENST00000400227 RNF126Q9BV68 326 aa5.84□□□□□ -1.47
CSNK2A1-204ENST00000400227 TMEM59Q9BXS4 323 aa5.84□□□□□ -1.47
CSNK2A1-204ENST00000400227 ANGPTL4Q9BY76 406 aa5.84□□□□□ -1.47
CSNK2A1-204ENST00000400227 DNTTIP1Q9H147 329 aa5.84□□□□□ -1.47
CSNK2A1-204ENST00000400227 FSCN3Q9NQT6 498 aa5.84□□□□□ -1.47
CSNK2A1-204ENST00000400227 MBD2Q9UBB5 411 aa5.84□□□□□ -1.47
CSNK2A1-204ENST00000400227 GLS2Q9UI32 602 aa5.84□□□□□ -1.47
CSNK2A1-204ENST00000400227 OSGIN2Q9Y236 505 aa5.84□□□□□ -1.47
CSNK2A1-204ENST00000400227 COL27A1Q8IZC6 1860 aaPredicted RBP5.84□□□□□ -1.48
CSNK2A1-204ENST00000400227 IGHV1-45A0A0A0MS14 117 aa5.83□□□□□ -1.48
CSNK2A1-204ENST00000400227 A0A0U1RQV5 110 aa5.83□□□□□ -1.48
CSNK2A1-204ENST00000400227 A0A1B0GW55 424 aa5.83□□□□□ -1.48
CSNK2A1-204ENST00000400227 OR5H15A6NDH6 313 aa5.83□□□□□ -1.48
CSNK2A1-204ENST00000400227 FAM25EA8MYX2 175 aa5.83□□□□□ -1.48
CSNK2A1-204ENST00000400227 F8VVB4 439 aa5.83□□□□□ -1.48
CSNK2A1-204ENST00000400227 F8VWA3 439 aa5.83□□□□□ -1.48
CSNK2A1-204ENST00000400227 TRIM77I1YAP6 450 aa5.83□□□□□ -1.48
CSNK2A1-204ENST00000400227 ZIC3O60481 467 aa5.83□□□□□ -1.48
CSNK2A1-204ENST00000400227 CA11O75493 328 aa5.83□□□□□ -1.48
CSNK2A1-204ENST00000400227 CRTAPO75718 401 aaPredicted RBP5.83□□□□□ -1.48
CSNK2A1-204ENST00000400227 HCKP08631 526 aa5.83□□□□□ -1.48
CSNK2A1-204ENST00000400227 CD63P08962 238 aa5.83□□□□□ -1.48
CSNK2A1-204ENST00000400227 DUX4L2P0CJ85 424 aa5.83□□□□□ -1.48
CSNK2A1-204ENST00000400227 DUX4L3P0CJ86 424 aa5.83□□□□□ -1.48
CSNK2A1-204ENST00000400227 DUX4L4P0CJ87 422 aa5.83□□□□□ -1.48
CSNK2A1-204ENST00000400227 DUX4L5P0CJ88 424 aa5.83□□□□□ -1.48
CSNK2A1-204ENST00000400227 DUX4L6P0CJ89 424 aa5.83□□□□□ -1.48
CSNK2A1-204ENST00000400227 DUX4L7P0CJ90 424 aa5.83□□□□□ -1.48
CSNK2A1-204ENST00000400227 COX6A1P12074 109 aa5.83□□□□□ -1.48
CSNK2A1-204ENST00000400227 LYL1P12980 280 aa5.83□□□□□ -1.48
CSNK2A1-204ENST00000400227 NR2C1P13056 603 aa5.83□□□□□ -1.48
CSNK2A1-204ENST00000400227 LIFP15018 202 aa5.83□□□□□ -1.48
CSNK2A1-204ENST00000400227 AKR1C4P17516 323 aa5.83□□□□□ -1.48
CSNK2A1-204ENST00000400227 PSMB6P28072 239 aa5.83□□□□□ -1.48
CSNK2A1-204ENST00000400227 SERPINF1P36955 418 aa5.83□□□□□ -1.48
CSNK2A1-204ENST00000400227 PTGFRP43088 359 aa5.83□□□□□ -1.48
CSNK2A1-204ENST00000400227 LUMP51884 338 aaPredicted RBP5.83□□□□□ -1.48
CSNK2A1-204ENST00000400227 PPIAP62937 165 aaKnown RBP5.83□□□□□ -1.48
CSNK2A1-204ENST00000400227 ECH1Q13011 328 aa5.83□□□□□ -1.48
CSNK2A1-204ENST00000400227 ATXN7L3Q14CW9 347 aaPredicted RBP5.83□□□□□ -1.48
CSNK2A1-204ENST00000400227 FAM189A2Q15884 450 aa5.83□□□□□ -1.48
CSNK2A1-204ENST00000400227 SGCAQ16586 387 aa5.83□□□□□ -1.48
CSNK2A1-204ENST00000400227 HLA-BQ31612 363 aa5.83□□□□□ -1.48
CSNK2A1-204ENST00000400227 FAM74A1Q5RGS3 127 aa5.83□□□□□ -1.48
CSNK2A1-204ENST00000400227 PXDC1Q5TGL8 231 aa5.83□□□□□ -1.48
CSNK2A1-204ENST00000400227 PRAMEF20Q5VT98 475 aa5.83□□□□□ -1.48
CSNK2A1-204ENST00000400227 OPN5Q6U736 354 aa5.83□□□□□ -1.48
CSNK2A1-204ENST00000400227 KCTD9Q7L273 389 aa5.83□□□□□ -1.48
CSNK2A1-204ENST00000400227 C1QL2Q7Z5L3 287 aa5.83□□□□□ -1.48
CSNK2A1-204ENST00000400227 COMMD2Q86X83 199 aa5.83□□□□□ -1.48
CSNK2A1-204ENST00000400227 TMEM123Q8N131 208 aa5.83□□□□□ -1.48
CSNK2A1-204ENST00000400227 ARRDC1Q8N5I2 433 aa5.83□□□□□ -1.48
CSNK2A1-204ENST00000400227 ZIC4Q8N9L1 334 aa5.83□□□□□ -1.48
CSNK2A1-204ENST00000400227 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.83□□□□□ -1.48
CSNK2A1-204ENST00000400227 ZBTB44Q8NCP5 570 aa5.83□□□□□ -1.48
CSNK2A1-204ENST00000400227 CCDC54Q8NEL0 328 aa5.83□□□□□ -1.48
CSNK2A1-204ENST00000400227 OR10K1Q8NGX5 313 aa5.83□□□□□ -1.48
CSNK2A1-204ENST00000400227 OR13G1Q8NGZ3 307 aa5.83□□□□□ -1.48
CSNK2A1-204ENST00000400227 LHFPL5Q8TAF8 219 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms