RNA–Protein interactions for RNA: ENST00000395454.6

SCAF11-204, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF11, Length 1,931 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-204ENST00000395454 GVQW1Q8N7I0 195 aa12.94□□□□□ -0.34
SCAF11-204ENST00000395454 CLEC18CQ8NCF0 446 aa12.94□□□□□ -0.34
SCAF11-204ENST00000395454 SLC30A7Q8NEW0 376 aa12.94□□□□□ -0.34
SCAF11-204ENST00000395454 OR4S1Q8NGB4 309 aa12.94□□□□□ -0.34
SCAF11-204ENST00000395454 OR13C8Q8NGS7 320 aa12.94□□□□□ -0.34
SCAF11-204ENST00000395454 LINC01560Q8TB33 94 aa12.94□□□□□ -0.34
SCAF11-204ENST00000395454 WFIKKN1Q96NZ8 548 aa12.94□□□□□ -0.34
SCAF11-204ENST00000395454 SLC6A7Q99884 636 aa12.94□□□□□ -0.34
SCAF11-204ENST00000395454 PECRQ9BY49 303 aa12.94□□□□□ -0.34
SCAF11-204ENST00000395454 OBP2BQ9NPH6 170 aa12.94□□□□□ -0.34
SCAF11-204ENST00000395454 IFT46Q9NQC8 304 aa12.94□□□□□ -0.34
SCAF11-204ENST00000395454 PLEKHA6Q9Y2H5 1048 aa12.94□□□□□ -0.34
SCAF11-204ENST00000395454 AMDHD2Q9Y303 409 aa12.94□□□□□ -0.34
SCAF11-204ENST00000395454 STARD10Q9Y365 291 aa12.94□□□□□ -0.34
SCAF11-204ENST00000395454 SLC25A15Q9Y619 301 aa12.94□□□□□ -0.34
SCAF11-204ENST00000395454 FAM230AA0A1W2PPH8 454 aa12.93□□□□□ -0.34
SCAF11-204ENST00000395454 CEACAM18A8MTB9 384 aa12.93□□□□□ -0.34
SCAF11-204ENST00000395454 DISC1C4P0D8 188 aa12.93□□□□□ -0.34
SCAF11-204ENST00000395454 CREBL2O60519 120 aaPredicted RBP12.93□□□□□ -0.34
SCAF11-204ENST00000395454 PPP3CBP16298 524 aa12.93□□□□□ -0.34
SCAF11-204ENST00000395454 SAXO1Q8IYX7 474 aa12.93□□□□□ -0.34
SCAF11-204ENST00000395454 OR10K1Q8NGX5 313 aa12.93□□□□□ -0.34
SCAF11-204ENST00000395454 HPSE2Q8WWQ2 592 aa12.93□□□□□ -0.34
SCAF11-204ENST00000395454 MRGPRFQ96AM1 343 aa12.93□□□□□ -0.34
SCAF11-204ENST00000395454 A1L4Q6 167 aa12.92□□□□□ -0.34
SCAF11-204ENST00000395454 PRSS44E7EML9 344 aa12.92□□□□□ -0.34
SCAF11-204ENST00000395454 RGS13O14921 159 aa12.92□□□□□ -0.34
SCAF11-204ENST00000395454 CCNOP22674 350 aa12.92□□□□□ -0.34
SCAF11-204ENST00000395454 BLVRBP30043 206 aaPredicted RBP12.92□□□□□ -0.34
SCAF11-204ENST00000395454 RSU1Q15404 277 aa12.92□□□□□ -0.34
SCAF11-204ENST00000395454 SIGIRRQ6IA17 410 aa12.92□□□□□ -0.34
SCAF11-204ENST00000395454 RFPL4BQ6ZWI9 263 aa12.92□□□□□ -0.34
SCAF11-204ENST00000395454 MOB3CQ70IA8 216 aa12.92□□□□□ -0.34
SCAF11-204ENST00000395454 HOGA1Q86XE5 327 aa12.92□□□□□ -0.34
SCAF11-204ENST00000395454 WFDC8Q8IUA0 241 aa12.92□□□□□ -0.34
SCAF11-204ENST00000395454 OR5L1Q8NGL2 311 aa12.92□□□□□ -0.34
SCAF11-204ENST00000395454 ZFAND1Q8TCF1 268 aa12.92□□□□□ -0.34
SCAF11-204ENST00000395454 PIGCQ92535 297 aa12.92□□□□□ -0.34
SCAF11-204ENST00000395454 FBXW5Q969U6 566 aa12.92□□□□□ -0.34
SCAF11-204ENST00000395454 HYLS1Q96M11 299 aa12.92□□□□□ -0.34
SCAF11-204ENST00000395454 SEC22CQ9BRL7 303 aa12.92□□□□□ -0.34
SCAF11-204ENST00000395454 FGF23Q9GZV9 251 aaPredicted RBP12.92□□□□□ -0.34
SCAF11-204ENST00000395454 POFUT1Q9H488 388 aa12.92□□□□□ -0.34
SCAF11-204ENST00000395454 BEX1Q9HBH7 125 aa12.92□□□□□ -0.34
SCAF11-204ENST00000395454 ICE1Q9Y2F5 2266 aa12.92□□□□□ -0.34
SCAF11-204ENST00000395454 DCHS2Q6V1P9 2916 aa12.92□□□□□ -0.34
SCAF11-204ENST00000395454 DOPEY2Q9Y3R5 2298 aa12.92□□□□□ -0.34
SCAF11-204ENST00000395454 CD300LBA8K4G0 201 aa12.92□□□□□ -0.34
SCAF11-204ENST00000395454 ZNF850A8MQ14 1090 aa12.92□□□□□ -0.34
SCAF11-204ENST00000395454 SSNA1O43805 119 aa12.92□□□□□ -0.34
SCAF11-204ENST00000395454 ANGPTL7O43827 346 aa12.92□□□□□ -0.34
SCAF11-204ENST00000395454 HRH1P35367 487 aa12.92□□□□□ -0.34
SCAF11-204ENST00000395454 IFITM2Q01629 132 aa12.92□□□□□ -0.34
SCAF11-204ENST00000395454 PRDX4Q13162 271 aa12.92□□□□□ -0.34
SCAF11-204ENST00000395454 TBC1D28Q2M2D7 210 aa12.92□□□□□ -0.34
SCAF11-204ENST00000395454 CEACAM21Q3KPI0 293 aa12.92□□□□□ -0.34
SCAF11-204ENST00000395454 ATPAF1Q5TC12 328 aaPredicted RBP12.92□□□□□ -0.34
SCAF11-204ENST00000395454 OR52W1Q6IF63 320 aa12.92□□□□□ -0.34
SCAF11-204ENST00000395454 FBXW12Q6X9E4 464 aa12.92□□□□□ -0.34
SCAF11-204ENST00000395454 TMEM200AQ86VY9 491 aa12.92□□□□□ -0.34
SCAF11-204ENST00000395454 ARRDC1Q8N5I2 433 aa12.92□□□□□ -0.34
SCAF11-204ENST00000395454 ZDHHC22Q8N966 263 aa12.92□□□□□ -0.34
SCAF11-204ENST00000395454 PCDHB16Q9NRJ7 776 aa12.92□□□□□ -0.34
SCAF11-204ENST00000395454 GPR160Q9UJ42 338 aa12.92□□□□□ -0.34
SCAF11-204ENST00000395454 KLF2Q9Y5W3 355 aaPredicted RBP12.92□□□□□ -0.34
SCAF11-204ENST00000395454 HEATR1Q9H583 2144 aaKnown RBP12.91□□□□□ -0.34
SCAF11-204ENST00000395454 TMEM82A0PJX8 343 aa12.91□□□□□ -0.34
SCAF11-204ENST00000395454 SPRY1O43609 319 aaPredicted RBP12.91□□□□□ -0.34
SCAF11-204ENST00000395454 IGKV3-15P01624 115 aa12.91□□□□□ -0.34
SCAF11-204ENST00000395454 THBDP07204 575 aa12.91□□□□□ -0.34
SCAF11-204ENST00000395454 PMELP40967 661 aa12.91□□□□□ -0.34
SCAF11-204ENST00000395454 ZNF83P51522 516 aa12.91□□□□□ -0.34
SCAF11-204ENST00000395454 IDH3GP51553 393 aaPredicted RBP12.91□□□□□ -0.34
SCAF11-204ENST00000395454 HLXQ14774 488 aaPredicted RBP12.91□□□□□ -0.34
SCAF11-204ENST00000395454 CDK10Q15131 360 aa12.91□□□□□ -0.34
SCAF11-204ENST00000395454 ELP2Q6IA86 826 aa12.91□□□□□ -0.34
SCAF11-204ENST00000395454 ZDHHC23Q8IYP9 409 aa12.91□□□□□ -0.34
SCAF11-204ENST00000395454 CCDC107Q8WV48 283 aa12.91□□□□□ -0.34
SCAF11-204ENST00000395454 PAPOLGQ9BWT3 736 aaKnown RBP12.91□□□□□ -0.34
SCAF11-204ENST00000395454 ZNF436Q9C0F3 470 aaPredicted RBP12.91□□□□□ -0.34
SCAF11-204ENST00000395454 CRIM1Q9NZV1 1036 aa12.91□□□□□ -0.34
SCAF11-204ENST00000395454 PAIP2BQ9ULR5 123 aaKnown RBP12.91□□□□□ -0.34
SCAF11-204ENST00000395454 MPC1Q9Y5U8 109 aa12.91□□□□□ -0.34
SCAF11-204ENST00000395454 USP9YO00507 2555 aaPredicted RBP12.91□□□□□ -0.34
SCAF11-204ENST00000395454 CADP27708 2225 aa12.9□□□□□ -0.34
SCAF11-204ENST00000395454 FAM172BPA6NC97 362 aa12.9□□□□□ -0.34
SCAF11-204ENST00000395454 FAM90A10PA6NDY2 464 aa12.9□□□□□ -0.34
SCAF11-204ENST00000395454 FAM90A18PA6NE21 464 aa12.9□□□□□ -0.34
SCAF11-204ENST00000395454 FAM90A16PA6NEW6 464 aa12.9□□□□□ -0.34
SCAF11-204ENST00000395454 FAM90A20PA6NIJ5 464 aa12.9□□□□□ -0.34
SCAF11-204ENST00000395454 FAM90A8PA6NJQ4 464 aa12.9□□□□□ -0.34
SCAF11-204ENST00000395454 FAM90A7PA6NKC0 464 aa12.9□□□□□ -0.34
SCAF11-204ENST00000395454 FAM90A22PA8MWA6 464 aa12.9□□□□□ -0.34
SCAF11-204ENST00000395454 FAM90A12PA8MX19 464 aa12.9□□□□□ -0.34
SCAF11-204ENST00000395454 FAM90A5PA8MXJ8 464 aa12.9□□□□□ -0.34
SCAF11-204ENST00000395454 FAM90A23PA8MXZ1 464 aa12.9□□□□□ -0.34
SCAF11-204ENST00000395454 FABP7O15540 132 aa12.9□□□□□ -0.34
SCAF11-204ENST00000395454 OR2A4O95047 310 aa12.9□□□□□ -0.34
SCAF11-204ENST00000395454 CSTBP04080 98 aaKnown RBP12.9□□□□□ -0.34
SCAF11-204ENST00000395454 FCER2P06734 321 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 96.5 ms