RNA–Protein interactions for RNA: ENST00000379340.9

POLR2J3-201, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-201ENST00000379340 RFPL4BQ6ZWI9 263 aa9.05□□□□□ -0.96
POLR2J3-201ENST00000379340 TMUB2Q71RG4 321 aa9.05□□□□□ -0.96
POLR2J3-201ENST00000379340 OVCH2Q7RTZ1 564 aa9.05□□□□□ -0.96
POLR2J3-201ENST00000379340 MRPL21Q7Z2W9 205 aaKnown RBP9.05□□□□□ -0.96
POLR2J3-201ENST00000379340 NUFIP2Q7Z417 695 aaKnown RBP9.05□□□□□ -0.96
POLR2J3-201ENST00000379340 RTN4RL2Q86UN3 420 aa9.05□□□□□ -0.96
POLR2J3-201ENST00000379340 Q8NFD4 153 aa9.05□□□□□ -0.96
POLR2J3-201ENST00000379340 OR1K1Q8NGR3 316 aa9.05□□□□□ -0.96
POLR2J3-201ENST00000379340 DHRS9Q9BPW9 319 aa9.05□□□□□ -0.96
POLR2J3-201ENST00000379340 PDCD10Q9BUL8 212 aa9.05□□□□□ -0.96
POLR2J3-201ENST00000379340 FXYD6Q9H0Q3 95 aa9.05□□□□□ -0.96
POLR2J3-201ENST00000379340 EHFQ9NZC4 300 aa9.05□□□□□ -0.96
POLR2J3-201ENST00000379340 SPRR3Q9UBC9 169 aa9.05□□□□□ -0.96
POLR2J3-201ENST00000379340 NOTCH2Q04721 2471 aa9.05□□□□□ -0.96
POLR2J3-201ENST00000379340 SPTAN1Q13813 2472 aaKnown RBP9.05□□□□□ -0.96
POLR2J3-201ENST00000379340 MED13Q9UHV7 2174 aa9.04□□□□□ -0.96
POLR2J3-201ENST00000379340 TRAV17A0A0B4J275 112 aa9.04□□□□□ -0.96
POLR2J3-201ENST00000379340 C5orf49A4QMS7 147 aa9.04□□□□□ -0.96
POLR2J3-201ENST00000379340 DBX1A6NMT0 343 aa9.04□□□□□ -0.96
POLR2J3-201ENST00000379340 ARPC5O15511 151 aa9.04□□□□□ -0.96
POLR2J3-201ENST00000379340 ANGPTL7O43827 346 aa9.04□□□□□ -0.96
POLR2J3-201ENST00000379340 SFT2D2O95562 160 aa9.04□□□□□ -0.96
POLR2J3-201ENST00000379340 AKR1C4P17516 323 aa9.04□□□□□ -0.96
POLR2J3-201ENST00000379340 VAMP1P23763 118 aa9.04□□□□□ -0.96
POLR2J3-201ENST00000379340 APLNRP35414 380 aa9.04□□□□□ -0.96
POLR2J3-201ENST00000379340 TMPRSS3P57727 454 aa9.04□□□□□ -0.96
POLR2J3-201ENST00000379340 ARPC4P59998 168 aa9.04□□□□□ -0.96
POLR2J3-201ENST00000379340 ZNF345Q14585 488 aa9.04□□□□□ -0.96
POLR2J3-201ENST00000379340 PLEKHN1Q494U1 663 aaPredicted RBP9.04□□□□□ -0.96
POLR2J3-201ENST00000379340 DMRTC1Q5HYR2 192 aa9.04□□□□□ -0.96
POLR2J3-201ENST00000379340 NKAPLQ5M9Q1 402 aa9.04□□□□□ -0.96
POLR2J3-201ENST00000379340 RPUSD3Q6P087 351 aaKnown RBP9.04□□□□□ -0.96
POLR2J3-201ENST00000379340 P4HA3Q7Z4N8 544 aa9.04□□□□□ -0.96
POLR2J3-201ENST00000379340 C6orf201Q7Z4U5 140 aa9.04□□□□□ -0.96
POLR2J3-201ENST00000379340 CCDC36Q8IYA8 594 aa9.04□□□□□ -0.96
POLR2J3-201ENST00000379340 ZDHHC23Q8IYP9 409 aa9.04□□□□□ -0.96
POLR2J3-201ENST00000379340 OR8H3Q8N146 312 aa9.04□□□□□ -0.96
POLR2J3-201ENST00000379340 ADAD2Q8NCV1 583 aaKnown RBP9.04□□□□□ -0.96
POLR2J3-201ENST00000379340 OR5L1Q8NGL2 311 aa9.04□□□□□ -0.96
POLR2J3-201ENST00000379340 OR13G1Q8NGZ3 307 aa9.04□□□□□ -0.96
POLR2J3-201ENST00000379340 OR51F2Q8NH61 342 aa9.04□□□□□ -0.96
POLR2J3-201ENST00000379340 COQ8AQ8NI60 647 aa9.04□□□□□ -0.96
POLR2J3-201ENST00000379340 POM121L2Q96KW2 1035 aa9.04□□□□□ -0.96
POLR2J3-201ENST00000379340 C5orf66Q9H5L9 145 aa9.04□□□□□ -0.96
POLR2J3-201ENST00000379340 FN3KRPQ9HA64 309 aa9.04□□□□□ -0.96
POLR2J3-201ENST00000379340 ZNF701Q9NV72 531 aaPredicted RBP9.04□□□□□ -0.96
POLR2J3-201ENST00000379340 AUP1Q9Y679 476 aa9.04□□□□□ -0.96
POLR2J3-201ENST00000379340 AHCTF1Q8WYP5 2266 aa9.04□□□□□ -0.96
POLR2J3-201ENST00000379340 TEP1Q99973 2627 aaKnown RBP9.04□□□□□ -0.96
POLR2J3-201ENST00000379340 MYO7BQ6PIF6 2116 aa9.03□□□□□ -0.96
POLR2J3-201ENST00000379340 TRAV14DV4A0A0A6YYC5 116 aa9.03□□□□□ -0.96
POLR2J3-201ENST00000379340 PQLC2LA1A4F0 135 aa9.03□□□□□ -0.96
POLR2J3-201ENST00000379340 OR5H14A6NHG9 310 aa9.03□□□□□ -0.96
POLR2J3-201ENST00000379340 ZNF850A8MQ14 1090 aa9.03□□□□□ -0.96
POLR2J3-201ENST00000379340 NKX2-8O15522 239 aa9.03□□□□□ -0.96
POLR2J3-201ENST00000379340 KLK10O43240 276 aa9.03□□□□□ -0.96
POLR2J3-201ENST00000379340 PDCD6O75340 191 aa9.03□□□□□ -0.96
POLR2J3-201ENST00000379340 B3GALNT1O75752 331 aa9.03□□□□□ -0.96
POLR2J3-201ENST00000379340 OR2F2O95006 317 aa9.03□□□□□ -0.96
POLR2J3-201ENST00000379340 NPY4RP50391 375 aa9.03□□□□□ -0.96
POLR2J3-201ENST00000379340 RBM11P57052 281 aaKnown RBP9.03□□□□□ -0.96
POLR2J3-201ENST00000379340 PRDX4Q13162 271 aa9.03□□□□□ -0.96
POLR2J3-201ENST00000379340 CLN3Q13286 438 aa9.03□□□□□ -0.96
POLR2J3-201ENST00000379340 OR2F1Q13607 317 aa9.03□□□□□ -0.96
POLR2J3-201ENST00000379340 HLXQ14774 488 aaPredicted RBP9.03□□□□□ -0.96
POLR2J3-201ENST00000379340 C3AR1Q16581 482 aa9.03□□□□□ -0.96
POLR2J3-201ENST00000379340 TAF9Q16594 264 aa9.03□□□□□ -0.96
POLR2J3-201ENST00000379340 CEACAM21Q3KPI0 293 aa9.03□□□□□ -0.96
POLR2J3-201ENST00000379340 C9orf135Q5VTT2 229 aa9.03□□□□□ -0.96
POLR2J3-201ENST00000379340 SIGIRRQ6IA17 410 aa9.03□□□□□ -0.96
POLR2J3-201ENST00000379340 ELP2Q6IA86 826 aa9.03□□□□□ -0.96
POLR2J3-201ENST00000379340 GSG1LQ6UXU4 331 aa9.03□□□□□ -0.96
POLR2J3-201ENST00000379340 VASH2Q86V25 355 aa9.03□□□□□ -0.96
POLR2J3-201ENST00000379340 TMEM200AQ86VY9 491 aa9.03□□□□□ -0.96
POLR2J3-201ENST00000379340 OR56B2PQ8NGI1 322 aa9.03□□□□□ -0.96
POLR2J3-201ENST00000379340 OR6K3Q8NGY3 331 aa9.03□□□□□ -0.96
POLR2J3-201ENST00000379340 BCL2L2Q92843 193 aaPredicted RBP9.03□□□□□ -0.96
POLR2J3-201ENST00000379340 WDR89Q96FK6 387 aaPredicted RBP9.03□□□□□ -0.96
POLR2J3-201ENST00000379340 CMSS1Q9BQ75 279 aaKnown RBP9.03□□□□□ -0.96
POLR2J3-201ENST00000379340 GSX2Q9BZM3 304 aa9.03□□□□□ -0.96
POLR2J3-201ENST00000379340 NMES1Q9C002 83 aa9.03□□□□□ -0.96
POLR2J3-201ENST00000379340 MFFQ9GZY8 342 aa9.03□□□□□ -0.96
POLR2J3-201ENST00000379340 ARL6Q9H0F7 186 aa9.03□□□□□ -0.96
POLR2J3-201ENST00000379340 RAB18Q9NP72 206 aa9.03□□□□□ -0.96
POLR2J3-201ENST00000379340 NECAP2Q9NVZ3 263 aa9.03□□□□□ -0.96
POLR2J3-201ENST00000379340 KIF25Q9UIL4 384 aa9.03□□□□□ -0.96
POLR2J3-201ENST00000379340 ANXA10Q9UJ72 324 aa9.03□□□□□ -0.96
POLR2J3-201ENST00000379340 C14orf166Q9Y224 244 aaKnown RBP9.03□□□□□ -0.96
POLR2J3-201ENST00000379340 IGKV1-12A0A0C4DH73 117 aa9.03□□□□□ -0.96
POLR2J3-201ENST00000379340 ZNF891A8MT65 544 aaPredicted RBP9.03□□□□□ -0.96
POLR2J3-201ENST00000379340 AQP7O14520 342 aa9.03□□□□□ -0.96
POLR2J3-201ENST00000379340 CNOT4O95628 575 aaKnown RBP9.03□□□□□ -0.96
POLR2J3-201ENST00000379340 IGKV1D-12P01611 117 aa9.03□□□□□ -0.96
POLR2J3-201ENST00000379340 HOXB1P14653 301 aaPredicted RBP9.03□□□□□ -0.96
POLR2J3-201ENST00000379340 CCNOP22674 350 aa9.03□□□□□ -0.96
POLR2J3-201ENST00000379340 CCL11P51671 97 aa9.03□□□□□ -0.96
POLR2J3-201ENST00000379340 FOXG1P55316 489 aaPredicted RBP9.03□□□□□ -0.96
POLR2J3-201ENST00000379340 ESCO2Q56NI9 601 aa9.03□□□□□ -0.96
POLR2J3-201ENST00000379340 NHLRC3Q5JS37 347 aa9.03□□□□□ -0.96
POLR2J3-201ENST00000379340 RNFT1Q5M7Z0 435 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms